RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W AFT1P22149 690 aa9.07□□□□□ -0.96
VAM3YOR106W BRE2P43132 505 aa9.07□□□□□ -0.96
VAM3YOR106W YJL007CP47080 104 aa9.07□□□□□ -0.96
VAM3YOR106W GCR2Q01722 534 aa9.07□□□□□ -0.96
VAM3YOR106W GUT2P32191 649 aa9.06□□□□□ -0.96
VAM3YOR106W BIO2P32451 375 aa9.05□□□□□ -0.96
VAM3YOR106W MRT4P33201 236 aaKnown RBP9.04□□□□□ -0.96
VAM3YOR106W YDJ1P25491 409 aaKnown RBP9.03□□□□□ -0.96
VAM3YOR106W ITT1Q04638 464 aa9.03□□□□□ -0.96
VAM3YOR106W UGA3P26370 528 aa9.02□□□□□ -0.97
VAM3YOR106W YNL108CP53929 270 aa9.02□□□□□ -0.97
VAM3YOR106W APP1P53933 587 aa9.02□□□□□ -0.97
VAM3YOR106W STE20Q03497 939 aaKnown RBP9.02□□□□□ -0.97
VAM3YOR106W YPR084WQ06821 456 aa9.01□□□□□ -0.97
VAM3YOR106W MCM16Q12262 181 aa9.01□□□□□ -0.97
VAM3YOR106W MSB3P48566 633 aaPredicted RBP9□□□□□ -0.97
VAM3YOR106W BIM1P40013 344 aa8.99□□□□□ -0.97
VAM3YOR106W RPL34BP40525 121 aaKnown RBP8.99□□□□□ -0.97
VAM3YOR106W EMW1P42842 904 aaKnown RBP8.99□□□□□ -0.97
VAM3YOR106W FRA1Q07825 749 aa8.99□□□□□ -0.97
VAM3YOR106W RTT106P40161 455 aa8.98□□□□□ -0.97
VAM3YOR106W EMP47P43555 445 aa8.98□□□□□ -0.97
VAM3YOR106W YPP1P46951 817 aa8.98□□□□□ -0.97
VAM3YOR106W MRX12P47084 519 aa8.97□□□□□ -0.97
VAM3YOR106W SUP45P12385 437 aaKnown RBP8.96□□□□□ -0.98
VAM3YOR106W ISF1P32488 338 aa8.96□□□□□ -0.98
VAM3YOR106W ATG32P40458 529 aa8.95□□□□□ -0.98
VAM3YOR106W YJR115WP47152 169 aa8.95□□□□□ -0.98
VAM3YOR106W SRF1Q12516 437 aa8.95□□□□□ -0.98
VAM3YOR106W ENO2P00925 437 aaKnown RBP8.94□□□□□ -0.98
VAM3YOR106W YBL086CP38177 466 aa8.94□□□□□ -0.98
VAM3YOR106W MKS1P34072 584 aa8.93□□□□□ -0.98
VAM3YOR106W TIF1P10081 395 aaKnown RBP8.92□□□□□ -0.98
VAM3YOR106W ATG20Q07528 640 aa8.92□□□□□ -0.98
VAM3YOR106W ATG3P40344 310 aa8.91□□□□□ -0.98
VAM3YOR106W PTK2P47116 818 aaKnown RBP8.9□□□□□ -0.98
VAM3YOR106W FBP26P32604 452 aa8.89□□□□□ -0.99
VAM3YOR106W RTG2P32608 588 aaKnown RBP8.89□□□□□ -0.99
VAM3YOR106W RIM21P48565 533 aa8.89□□□□□ -0.99
VAM3YOR106W DFG5Q05031 458 aa8.88□□□□□ -0.99
VAM3YOR106W ARG82P07250 355 aa8.86□□□□□ -0.99
VAM3YOR106W BDS1Q08347 646 aa8.86□□□□□ -0.99
VAM3YOR106W ENV9Q08651 330 aa8.86□□□□□ -0.99
VAM3YOR106W APL6P46682 809 aa8.85□□□□□ -0.99
VAM3YOR106W ISR1Q06098 443 aaKnown RBP8.85□□□□□ -0.99
VAM3YOR106W ISU1Q03020 165 aa8.84□□□□□ -0.99
VAM3YOR106W YPR204WQ08995 1032 aa8.84□□□□□ -0.99
VAM3YOR106W RPP2BP02400 110 aaKnown RBP8.83□□□□□ -1
VAM3YOR106W AAD14P42884 376 aa8.83□□□□□ -1
VAM3YOR106W UTP13Q05946 817 aaKnown RBP8.83□□□□□ -1
VAM3YOR106W ENO1P00924 437 aaKnown RBP8.82□□□□□ -1
VAM3YOR106W MET22P32179 357 aa8.82□□□□□ -1
VAM3YOR106W SOH1P38633 127 aa8.82□□□□□ -1
VAM3YOR106W STE6P12866 1290 aa8.81□□□□□ -1
VAM3YOR106W NUP85P46673 744 aa8.81□□□□□ -1
VAM3YOR106W YDR444WQ04093 687 aa8.81□□□□□ -1
VAM3YOR106W MRX10Q05648 414 aa8.8□□□□□ -1
VAM3YOR106W YLR346CQ06139 101 aa8.8□□□□□ -1
VAM3YOR106W GAR1P28007 205 aaKnown RBP8.79□□□□□ -1
VAM3YOR106W RDS2P19541 446 aaKnown RBP8.77□□□□□ -1.01
VAM3YOR106W GBP2P25555 427 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
VAM3YOR106W HAL5P38970 855 aaKnown RBP8.77□□□□□ -1.01
VAM3YOR106W DLD3P39976 496 aaKnown RBP8.77□□□□□ -1.01
VAM3YOR106W LSC2P53312 427 aa8.77□□□□□ -1.01
VAM3YOR106W LCB5Q06147 687 aaKnown RBP8.77□□□□□ -1.01
VAM3YOR106W UTR2P32623 467 aa8.76□□□□□ -1.01
VAM3YOR106W DAT1P13483 248 aaKnown RBP8.75□□□□□ -1.01
VAM3YOR106W DLD1P32891 587 aa8.75□□□□□ -1.01
VAM3YOR106W SIS2P36024 562 aa8.74□□□□□ -1.01
VAM3YOR106W OPT2Q06593 877 aa8.74□□□□□ -1.01
VAM3YOR106W SPT2P06843 333 aaPredicted RBP8.73□□□□□ -1.01
VAM3YOR106W MIP1P15801 1254 aa8.73□□□□□ -1.01
VAM3YOR106W TBS1P38114 1094 aa8.73□□□□□ -1.01
VAM3YOR106W HDA3Q06623 655 aa8.72□□□□□ -1.01
VAM3YOR106W YJR098CP47139 656 aa8.71□□□□□ -1.02
VAM3YOR106W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
VAM3YOR106W WTM2Q12206 467 aa8.71□□□□□ -1.02
VAM3YOR106W UBP2Q01476 1272 aa8.7□□□□□ -1.02
VAM3YOR106W PEP12P32854 288 aa8.68□□□□□ -1.02
VAM3YOR106W GLY1P37303 387 aaKnown RBP8.68□□□□□ -1.02
VAM3YOR106W KTR7P40504 517 aa8.68□□□□□ -1.02
VAM3YOR106W SCW11P53189 542 aa8.68□□□□□ -1.02
VAM3YOR106W TCB1Q12466 1186 aa8.68□□□□□ -1.02
VAM3YOR106W AIM9P40053 627 aaKnown RBP8.67□□□□□ -1.02
VAM3YOR106W YFL034WP43564 1073 aa8.67□□□□□ -1.02
VAM3YOR106W RLF2Q12495 606 aa8.66□□□□□ -1.02
VAM3YOR106W TTI1P36097 1038 aa8.65□□□□□ -1.02
VAM3YOR106W SLX8P40072 274 aa8.64□□□□□ -1.03
VAM3YOR106W UTP7P40055 554 aaKnown RBP8.63□□□□□ -1.03
VAM3YOR106W TY1A-BLQ12266 440 aa8.63□□□□□ -1.03
VAM3YOR106W TSC13Q99190 310 aa8.63□□□□□ -1.03
VAM3YOR106W PDI1P17967 522 aaKnown RBP8.62□□□□□ -1.03
VAM3YOR106W CPS1P27614 576 aa8.61□□□□□ -1.03
VAM3YOR106W VTC4P47075 721 aa8.61□□□□□ -1.03
VAM3YOR106W SWI5P08153 709 aa8.6□□□□□ -1.03
VAM3YOR106W SUM1P46676 1062 aa8.6□□□□□ -1.03
VAM3YOR106W CAF120P53836 1060 aa8.6□□□□□ -1.03
VAM3YOR106W PHO87P25360 923 aa8.59□□□□□ -1.03
VAM3YOR106W NTH2P35172 780 aa8.59□□□□□ -1.03
VAM3YOR106W TGL4P36165 910 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms