RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W YLL066CQ99208 1374 aa10.32□□□□□ -0.76
PRE5YMR314W DPS1P04802 557 aaKnown RBP10.32□□□□□ -0.76
PRE5YMR314W GRX1P25373 110 aaKnown RBP10.32□□□□□ -0.76
PRE5YMR314W FPK1P53739 893 aa10.3□□□□□ -0.76
PRE5YMR314W MLP1Q02455 1875 aaKnown RBP10.28□□□□□ -0.76
PRE5YMR314W CWH41P53008 833 aa10.28□□□□□ -0.76
PRE5YMR314W RIX7Q07844 837 aaKnown RBP10.28□□□□□ -0.76
PRE5YMR314W GAS4Q08271 471 aa10.27□□□□□ -0.77
PRE5YMR314W RTF1P53064 558 aa10.24□□□□□ -0.77
PRE5YMR314W OSM1P21375 501 aaKnown RBP10.23□□□□□ -0.77
PRE5YMR314W SCT1P32784 759 aa10.23□□□□□ -0.77
PRE5YMR314W NYV1Q12255 253 aa10.23□□□□□ -0.77
PRE5YMR314W PDI1P17967 522 aaKnown RBP10.22□□□□□ -0.77
PRE5YMR314W DUS1P53759 423 aaKnown RBP10.22□□□□□ -0.77
PRE5YMR314W INP54Q08227 384 aaKnown RBP10.22□□□□□ -0.77
PRE5YMR314W RPS9BP05755 195 aaKnown RBP10.19□□□□□ -0.78
PRE5YMR314W SLI15P38283 698 aa10.19□□□□□ -0.78
PRE5YMR314W NST1P53935 1240 aa10.19□□□□□ -0.78
PRE5YMR314W SEC3P33332 1336 aaKnown RBP10.18□□□□□ -0.78
PRE5YMR314W ETP1P38748 585 aaKnown RBP10.18□□□□□ -0.78
PRE5YMR314W YBP2P53169 641 aa10.18□□□□□ -0.78
PRE5YMR314W FAS2P19097 1887 aaKnown RBP10.17□□□□□ -0.78
PRE5YMR314W POM152P39685 1337 aa10.17□□□□□ -0.78
PRE5YMR314W PFF1P38244 976 aa10.17□□□□□ -0.78
PRE5YMR314W UTP10P42945 1769 aaKnown RBP10.16□□□□□ -0.78
PRE5YMR314W THS1P04801 734 aaKnown RBP10.15□□□□□ -0.78
PRE5YMR314W RET1P22276 1149 aaKnown RBP10.15□□□□□ -0.78
PRE5YMR314W GRX4P32642 244 aa10.15□□□□□ -0.78
PRE5YMR314W AUS1Q08409 1394 aa10.14□□□□□ -0.79
PRE5YMR314W SMY1P32364 656 aaKnown RBP10.14□□□□□ -0.79
PRE5YMR314W TUM1Q08686 304 aaKnown RBP10.14□□□□□ -0.79
PRE5YMR314W FKH1P40466 484 aa10.13□□□□□ -0.79
PRE5YMR314W TAP42Q04372 366 aa10.13□□□□□ -0.79
PRE5YMR314W ATG20Q07528 640 aa10.13□□□□□ -0.79
PRE5YMR314W CTI6Q08923 506 aa10.13□□□□□ -0.79
PRE5YMR314W YLR278CQ05854 1341 aa10.12□□□□□ -0.79
PRE5YMR314W TOP1P04786 769 aa10.12□□□□□ -0.79
PRE5YMR314W RTG2P32608 588 aaKnown RBP10.12□□□□□ -0.79
PRE5YMR314W SHC1P39000 512 aa10.11□□□□□ -0.79
PRE5YMR314W NUP145P49687 1317 aa10.08□□□□□ -0.8
PRE5YMR314W ERO1Q03103 563 aa10.08□□□□□ -0.8
PRE5YMR314W PMD1P32634 1753 aa10.07□□□□□ -0.8
PRE5YMR314W LPD1P09624 499 aaKnown RBP10.07□□□□□ -0.8
PRE5YMR314W ICL1P28240 557 aaPredicted RBP10.07□□□□□ -0.8
PRE5YMR314W VHR2P40041 505 aa10.07□□□□□ -0.8
PRE5YMR314W ORC1P54784 914 aaPredicted RBP10.07□□□□□ -0.8
PRE5YMR314W SDH2P21801 266 aa10.06□□□□□ -0.8
PRE5YMR314W TEA1P47988 759 aa10.06□□□□□ -0.8
PRE5YMR314W BUD27P43573 796 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
PRE5YMR314W FIG2P25653 1609 aa10.04□□□□□ -0.8
PRE5YMR314W YKU70P32807 602 aa10.04□□□□□ -0.8
PRE5YMR314W MDG1P53885 366 aa10.04□□□□□ -0.8
PRE5YMR314W CTF4Q01454 927 aa10.04□□□□□ -0.8
PRE5YMR314W HIM1Q06674 414 aa10.04□□□□□ -0.8
PRE5YMR314W IRC3Q06683 689 aa10.04□□□□□ -0.8
PRE5YMR314W RAT1Q02792 1006 aaKnown RBP10.03□□□□□ -0.8
PRE5YMR314W RMT2Q03305 412 aa10.03□□□□□ -0.8
PRE5YMR314W MAC1P35192 417 aa10.01□□□□□ -0.81
PRE5YMR314W BDF2Q07442 638 aa10.01□□□□□ -0.81
PRE5YMR314W GRX6Q12438 231 aa10.01□□□□□ -0.81
PRE5YMR314W HSP104P31539 908 aaKnown RBP10□□□□□ -0.81
PRE5YMR314W RTG3P38165 486 aa10□□□□□ -0.81
PRE5YMR314W YIL089WP40500 205 aa10□□□□□ -0.81
PRE5YMR314W DSD1P53095 428 aa10□□□□□ -0.81
PRE5YMR314W SRF1Q12516 437 aa10□□□□□ -0.81
PRE5YMR314W SIT4P20604 311 aa9.99□□□□□ -0.81
PRE5YMR314W SER1P33330 395 aaKnown RBP9.99□□□□□ -0.81
PRE5YMR314W DIB1Q06819 143 aaPredicted RBP9.99□□□□□ -0.81
PRE5YMR314W DIP2Q12220 943 aaPredicted RBP9.99□□□□□ -0.81
PRE5YMR314W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
PRE5YMR314W YFR016CP43597 1233 aaKnown RBP9.98□□□□□ -0.81
PRE5YMR314W NOP53Q12080 455 aaKnown RBP9.98□□□□□ -0.81
PRE5YMR314W PHM7Q12252 991 aa9.98□□□□□ -0.81
PRE5YMR314W TIF6Q12522 245 aaKnown RBP9.97□□□□□ -0.81
PRE5YMR314W MSM1P22438 575 aa9.96□□□□□ -0.82
PRE5YMR314W HKR1P41809 1802 aa9.96□□□□□ -0.82
PRE5YMR314W GLC3P32775 704 aa9.95□□□□□ -0.82
PRE5YMR314W FET4P40988 552 aa9.95□□□□□ -0.82
PRE5YMR314W TYW1Q08960 810 aaKnown RBP9.95□□□□□ -0.82
PRE5YMR314W TIM50Q02776 476 aa9.94□□□□□ -0.82
PRE5YMR314W CAF20P12962 161 aaKnown RBP9.93□□□□□ -0.82
PRE5YMR314W KAR2P16474 682 aaKnown RBP9.93□□□□□ -0.82
PRE5YMR314W PEA2P40091 420 aa9.93□□□□□ -0.82
PRE5YMR314W YGL082WP53155 381 aa9.92□□□□□ -0.82
PRE5YMR314W AOS1Q06624 347 aa9.92□□□□□ -0.82
PRE5YMR314W GAP1P19145 602 aaPredicted RBP9.91□□□□□ -0.82
PRE5YMR314W KCC4P25389 1037 aa9.9□□□□□ -0.82
PRE5YMR314W PIB1Q06651 286 aa9.9□□□□□ -0.82
PRE5YMR314W SSP2Q08646 371 aa9.9□□□□□ -0.82
PRE5YMR314W AIM7Q12156 149 aa9.9□□□□□ -0.82
PRE5YMR314W AKL1P38080 1108 aaKnown RBP9.89□□□□□ -0.83
PRE5YMR314W DPL1Q05567 589 aa9.89□□□□□ -0.83
PRE5YMR314W ALE1Q08548 619 aa9.89□□□□□ -0.83
PRE5YMR314W EMP47P43555 445 aa9.88□□□□□ -0.83
PRE5YMR314W UBP16Q02863 499 aa9.88□□□□□ -0.83
PRE5YMR314W CWC15Q03772 175 aaKnown RBP9.88□□□□□ -0.83
PRE5YMR314W YKR023WP36119 530 aaKnown RBP9.87□□□□□ -0.83
PRE5YMR314W NCS6P53088 359 aa9.87□□□□□ -0.83
PRE5YMR314W GSC2P40989 1895 aa9.87□□□□□ -0.83
PRE5YMR314W BSD2P38356 321 aa9.86□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms