RNA–Protein interactions for RNA: YMR294W

JNM1, Transcript of Component of the yeast dynactin complex, yeastyeast

Gene JNM1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
JNM1YMR294W RPP1BP10622 106 aaKnown RBP9.03□□□□□ -0.96
JNM1YMR294W ORC6P38826 435 aa9.03□□□□□ -0.96
JNM1YMR294W YML082WQ04533 649 aaKnown RBP9.02□□□□□ -0.97
JNM1YMR294W SEC7P11075 2009 aaKnown RBP9.02□□□□□ -0.97
JNM1YMR294W GLC3P32775 704 aa9.01□□□□□ -0.97
JNM1YMR294W PTC2P39966 464 aaKnown RBP9.01□□□□□ -0.97
JNM1YMR294W BNR1P40450 1375 aa9□□□□□ -0.97
JNM1YMR294W ISU2Q12056 156 aa9□□□□□ -0.97
JNM1YMR294W CHC1P22137 1653 aaKnown RBP9□□□□□ -0.97
JNM1YMR294W IKI3Q06706 1349 aaKnown RBP9□□□□□ -0.97
JNM1YMR294W SRB8P25648 1427 aa8.99□□□□□ -0.97
JNM1YMR294W CDC73Q06697 393 aa8.99□□□□□ -0.97
JNM1YMR294W KIN1P13185 1064 aa8.98□□□□□ -0.97
JNM1YMR294W GAP1P19145 602 aaPredicted RBP8.98□□□□□ -0.97
JNM1YMR294W ATF2P53296 535 aa8.97□□□□□ -0.97
JNM1YMR294W CSC1Q06538 782 aa8.97□□□□□ -0.97
JNM1YMR294W SSM4P40318 1319 aa8.97□□□□□ -0.97
JNM1YMR294W CLB5P30283 435 aa8.94□□□□□ -0.98
JNM1YMR294W YOR093CQ12275 1648 aa8.93□□□□□ -0.98
JNM1YMR294W BUD21Q08492 214 aaPredicted RBP8.92□□□□□ -0.98
JNM1YMR294W TFB4Q12004 338 aa8.92□□□□□ -0.98
JNM1YMR294W RGR1P19263 1082 aa8.91□□□□□ -0.98
JNM1YMR294W RAM1P22007 431 aa8.9□□□□□ -0.98
JNM1YMR294W MVP1P40959 511 aaKnown RBP8.9□□□□□ -0.98
JNM1YMR294W YPR015CQ12531 247 aa8.89□□□□□ -0.99
JNM1YMR294W YAP3P38749 330 aa8.86□□□□□ -0.99
JNM1YMR294W TEA1P47988 759 aa8.86□□□□□ -0.99
JNM1YMR294W DPS1P04802 557 aaKnown RBP8.83□□□□□ -1
JNM1YMR294W PEX21P50091 288 aa8.83□□□□□ -1
JNM1YMR294W PDR1P12383 1068 aa8.82□□□□□ -1
JNM1YMR294W DNF3Q12674 1656 aa8.81□□□□□ -1
JNM1YMR294W TYS1P36421 394 aaKnown RBP8.8□□□□□ -1
JNM1YMR294W HGH1P48362 394 aaKnown RBP8.8□□□□□ -1
JNM1YMR294W HPC2Q01448 625 aa8.8□□□□□ -1
JNM1YMR294W YPR109WQ06104 294 aa8.8□□□□□ -1
JNM1YMR294W VMR1P38735 1592 aa8.8□□□□□ -1
JNM1YMR294W IPL1P38991 367 aa8.78□□□□□ -1
JNM1YMR294W URN1Q06525 465 aaKnown RBP8.78□□□□□ -1
JNM1YMR294W NUP188P52593 1655 aaKnown RBP8.78□□□□□ -1
JNM1YMR294W SSA2P10592 639 aaKnown RBP8.77□□□□□ -1.01
JNM1YMR294W DMA2P53924 522 aa8.77□□□□□ -1.01
JNM1YMR294W GUA1P38625 525 aaKnown RBP8.76□□□□□ -1.01
JNM1YMR294W TUM1Q08686 304 aaKnown RBP8.76□□□□□ -1.01
JNM1YMR294W PDR11P40550 1411 aa8.75□□□□□ -1.01
JNM1YMR294W YRR1Q12172 810 aa8.75□□□□□ -1.01
JNM1YMR294W PDR5P33302 1511 aaKnown RBP8.75□□□□□ -1.01
JNM1YMR294W MAK10Q02197 733 aa8.74□□□□□ -1.01
JNM1YMR294W SIT4P20604 311 aa8.73□□□□□ -1.01
JNM1YMR294W CSN12P47130 423 aa8.73□□□□□ -1.01
JNM1YMR294W HST2P53686 357 aa8.73□□□□□ -1.01
JNM1YMR294W NIS1P53939 407 aa8.73□□□□□ -1.01
JNM1YMR294W SAS4Q04003 481 aa8.73□□□□□ -1.01
JNM1YMR294W GYP1Q08484 637 aa8.73□□□□□ -1.01
JNM1YMR294W IML1P47170 1584 aa8.72□□□□□ -1.01
JNM1YMR294W GCN2P15442 1659 aa8.72□□□□□ -1.01
JNM1YMR294W RTF1P53064 558 aa8.7□□□□□ -1.02
JNM1YMR294W FPK1P53739 893 aa8.7□□□□□ -1.02
JNM1YMR294W YMR196WQ04336 1088 aa8.7□□□□□ -1.02
JNM1YMR294W GLN1P32288 370 aaKnown RBP8.68□□□□□ -1.02
JNM1YMR294W BUD20Q08004 166 aaPredicted RBP8.68□□□□□ -1.02
JNM1YMR294W STR2P47164 639 aa8.67□□□□□ -1.02
JNM1YMR294W NUD1P32336 851 aa8.66□□□□□ -1.02
JNM1YMR294W BRL1P38770 471 aa8.66□□□□□ -1.02
JNM1YMR294W ISM1P48526 1002 aa8.66□□□□□ -1.02
JNM1YMR294W SDH2P21801 266 aa8.65□□□□□ -1.02
JNM1YMR294W KTR1P27810 393 aaKnown RBP8.65□□□□□ -1.02
JNM1YMR294W MMP1Q12372 583 aa8.64□□□□□ -1.03
JNM1YMR294W RAS1P01119 309 aa8.63□□□□□ -1.03
JNM1YMR294W PRT1P06103 763 aaKnown RBP8.63□□□□□ -1.03
JNM1YMR294W AMS1P22855 1083 aa8.63□□□□□ -1.03
JNM1YMR294W SRC1Q03707 834 aa8.63□□□□□ -1.03
JNM1YMR294W HAP1P0CE41 1502 aa8.63□□□□□ -1.03
JNM1YMR294W YNL115CP53925 644 aa8.62□□□□□ -1.03
JNM1YMR294W TFB3Q03290 321 aa8.62□□□□□ -1.03
JNM1YMR294W USO1P25386 1790 aa8.61□□□□□ -1.03
JNM1YMR294W NPL4P33755 580 aa8.61□□□□□ -1.03
JNM1YMR294W MRF1P30775 413 aaPredicted RBP8.59□□□□□ -1.03
JNM1YMR294W PAF1P38351 445 aa8.59□□□□□ -1.03
JNM1YMR294W TYW1Q08960 810 aaKnown RBP8.59□□□□□ -1.03
JNM1YMR294W RAV1P47104 1357 aa8.59□□□□□ -1.03
JNM1YMR294W YEL077CQ3E7X8 1277 aa8.57□□□□□ -1.04
JNM1YMR294W TY1A-DR4O74302 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-HP0C2I4 478 aaKnown RBP8.56□□□□□ -1.04
JNM1YMR294W TY1A-AP0CX57 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-PR1P0CX58 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-ORP0CX59 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-PR2P0CX60 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-DR5P0CX65 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-ER2P0CX66 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-GR3P0CX67 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-LR1P0CX68 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-MR2P0CX69 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-JR2P47099 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-DR1Q03856 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-ML1Q04706 440 aaKnown RBP8.56□□□□□ -1.04
JNM1YMR294W TY1A-BRQ12217 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-NL2Q12470 440 aa8.56□□□□□ -1.04
JNM1YMR294W TY1A-GR2Q12485 440 aa8.56□□□□□ -1.04
JNM1YMR294W ESS1P22696 170 aa8.55□□□□□ -1.04
JNM1YMR294W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms