RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ASH1P34233 588 aa7.47□□□□□ -1.21
SMD2YLR275W HST3P53687 447 aa7.47□□□□□ -1.21
SMD2YLR275W YJL007CP47080 104 aa7.46□□□□□ -1.22
SMD2YLR275W YPR084WQ06821 456 aa7.46□□□□□ -1.22
SMD2YLR275W GUT2P32191 649 aa7.45□□□□□ -1.22
SMD2YLR275W MRT4P33201 236 aaKnown RBP7.45□□□□□ -1.22
SMD2YLR275W YDJ1P25491 409 aaKnown RBP7.44□□□□□ -1.22
SMD2YLR275W BRE2P43132 505 aa7.44□□□□□ -1.22
SMD2YLR275W ITT1Q04638 464 aa7.44□□□□□ -1.22
SMD2YLR275W YNL108CP53929 270 aa7.43□□□□□ -1.22
SMD2YLR275W BIM1P40013 344 aa7.42□□□□□ -1.22
SMD2YLR275W GCR2Q01722 534 aa7.42□□□□□ -1.22
SMD2YLR275W STE20Q03497 939 aaKnown RBP7.42□□□□□ -1.22
SMD2YLR275W FRA1Q07825 749 aa7.42□□□□□ -1.22
SMD2YLR275W MCM16Q12262 181 aa7.42□□□□□ -1.22
SMD2YLR275W SUP45P12385 437 aaKnown RBP7.41□□□□□ -1.22
SMD2YLR275W EMW1P42842 904 aaKnown RBP7.41□□□□□ -1.22
SMD2YLR275W MSB3P48566 633 aaPredicted RBP7.41□□□□□ -1.22
SMD2YLR275W APP1P53933 587 aa7.41□□□□□ -1.22
SMD2YLR275W UGA3P26370 528 aa7.4□□□□□ -1.22
SMD2YLR275W ISF1P32488 338 aa7.39□□□□□ -1.23
SMD2YLR275W RTT106P40161 455 aa7.39□□□□□ -1.23
SMD2YLR275W ATG32P40458 529 aa7.39□□□□□ -1.23
SMD2YLR275W EMP47P43555 445 aa7.39□□□□□ -1.23
SMD2YLR275W YPP1P46951 817 aa7.39□□□□□ -1.23
SMD2YLR275W MRX12P47084 519 aa7.38□□□□□ -1.23
SMD2YLR275W ENO2P00925 437 aaKnown RBP7.37□□□□□ -1.23
SMD2YLR275W YBL086CP38177 466 aa7.37□□□□□ -1.23
SMD2YLR275W RPL34BP40525 121 aaKnown RBP7.37□□□□□ -1.23
SMD2YLR275W TIF1P10081 395 aaKnown RBP7.36□□□□□ -1.23
SMD2YLR275W YJR115WP47152 169 aa7.36□□□□□ -1.23
SMD2YLR275W MKS1P34072 584 aa7.35□□□□□ -1.23
SMD2YLR275W RIM21P48565 533 aa7.34□□□□□ -1.23
SMD2YLR275W ATG20Q07528 640 aa7.33□□□□□ -1.24
SMD2YLR275W FBP26P32604 452 aa7.32□□□□□ -1.24
SMD2YLR275W RTG2P32608 588 aaKnown RBP7.32□□□□□ -1.24
SMD2YLR275W APL6P46682 809 aa7.32□□□□□ -1.24
SMD2YLR275W PTK2P47116 818 aaKnown RBP7.32□□□□□ -1.24
SMD2YLR275W SRF1Q12516 437 aa7.32□□□□□ -1.24
SMD2YLR275W ATG3P40344 310 aa7.31□□□□□ -1.24
SMD2YLR275W DFG5Q05031 458 aa7.31□□□□□ -1.24
SMD2YLR275W ENO1P00924 437 aaKnown RBP7.28□□□□□ -1.24
SMD2YLR275W ARG82P07250 355 aa7.28□□□□□ -1.24
SMD2YLR275W ISU1Q03020 165 aa7.28□□□□□ -1.24
SMD2YLR275W MRX10Q05648 414 aa7.28□□□□□ -1.24
SMD2YLR275W UTP13Q05946 817 aaKnown RBP7.28□□□□□ -1.24
SMD2YLR275W ISR1Q06098 443 aaKnown RBP7.28□□□□□ -1.24
SMD2YLR275W BDS1Q08347 646 aa7.28□□□□□ -1.24
SMD2YLR275W STE6P12866 1290 aa7.27□□□□□ -1.25
SMD2YLR275W SOH1P38633 127 aa7.27□□□□□ -1.25
SMD2YLR275W AAD14P42884 376 aa7.27□□□□□ -1.25
SMD2YLR275W ENV9Q08651 330 aa7.27□□□□□ -1.25
SMD2YLR275W YPR204WQ08995 1032 aa7.27□□□□□ -1.25
SMD2YLR275W RDS2P19541 446 aaKnown RBP7.26□□□□□ -1.25
SMD2YLR275W MET22P32179 357 aa7.26□□□□□ -1.25
SMD2YLR275W NUP85P46673 744 aa7.26□□□□□ -1.25
SMD2YLR275W HAL5P38970 855 aaKnown RBP7.24□□□□□ -1.25
SMD2YLR275W YDR444WQ04093 687 aa7.24□□□□□ -1.25
SMD2YLR275W RPP2BP02400 110 aaKnown RBP7.23□□□□□ -1.25
SMD2YLR275W LCB5Q06147 687 aaKnown RBP7.22□□□□□ -1.25
SMD2YLR275W UTR2P32623 467 aa7.21□□□□□ -1.26
SMD2YLR275W YLR346CQ06139 101 aa7.21□□□□□ -1.26
SMD2YLR275W SPT2P06843 333 aaPredicted RBP7.2□□□□□ -1.26
SMD2YLR275W GAR1P28007 205 aaKnown RBP7.2□□□□□ -1.26
SMD2YLR275W DLD1P32891 587 aa7.2□□□□□ -1.26
SMD2YLR275W LSC2P53312 427 aa7.2□□□□□ -1.26
SMD2YLR275W OPT2Q06593 877 aa7.2□□□□□ -1.26
SMD2YLR275W PEP12P32854 288 aa7.19□□□□□ -1.26
SMD2YLR275W SIS2P36024 562 aa7.19□□□□□ -1.26
SMD2YLR275W DLD3P39976 496 aaKnown RBP7.19□□□□□ -1.26
SMD2YLR275W DAT1P13483 248 aaKnown RBP7.18□□□□□ -1.26
SMD2YLR275W MIP1P15801 1254 aa7.18□□□□□ -1.26
SMD2YLR275W YJR098CP47139 656 aa7.18□□□□□ -1.26
SMD2YLR275W HDA3Q06623 655 aa7.18□□□□□ -1.26
SMD2YLR275W WTM2Q12206 467 aa7.18□□□□□ -1.26
SMD2YLR275W TBS1P38114 1094 aa7.17□□□□□ -1.26
SMD2YLR275W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26 RIP-Chip
SMD2YLR275W GLY1P37303 387 aaKnown RBP7.16□□□□□ -1.26
SMD2YLR275W GBP2P25555 427 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
SMD2YLR275W TTI1P36097 1038 aa7.14□□□□□ -1.27
SMD2YLR275W UBP2Q01476 1272 aa7.14□□□□□ -1.27
SMD2YLR275W TCB1Q12466 1186 aa7.14□□□□□ -1.27
SMD2YLR275W RLF2Q12495 606 aa7.14□□□□□ -1.27
SMD2YLR275W AIM9P40053 627 aaKnown RBP7.13□□□□□ -1.27
SMD2YLR275W SLX8P40072 274 aa7.13□□□□□ -1.27
SMD2YLR275W KTR7P40504 517 aa7.13□□□□□ -1.27
SMD2YLR275W YFL034WP43564 1073 aa7.13□□□□□ -1.27
SMD2YLR275W SCW11P53189 542 aa7.13□□□□□ -1.27
SMD2YLR275W TY1A-BLQ12266 440 aa7.11□□□□□ -1.27
SMD2YLR275W TSC13Q99190 310 aa7.11□□□□□ -1.27
SMD2YLR275W CPS1P27614 576 aa7.1□□□□□ -1.27
SMD2YLR275W UTP7P40055 554 aaKnown RBP7.1□□□□□ -1.27
SMD2YLR275W VTC4P47075 721 aa7.1□□□□□ -1.27
SMD2YLR275W PDI1P17967 522 aaKnown RBP7.09□□□□□ -1.27
SMD2YLR275W SWI5P08153 709 aa7.08□□□□□ -1.28
SMD2YLR275W PHO87P25360 923 aa7.08□□□□□ -1.28
SMD2YLR275W TGL4P36165 910 aa7.08□□□□□ -1.28
SMD2YLR275W SUM1P46676 1062 aa7.08□□□□□ -1.28
SMD2YLR275W RPS6AP0CX37 236 aaKnown RBP7.07□□□□□ -1.28
SMD2YLR275W RPS6BP0CX38 236 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms