RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W MRM1P25270 412 aa7.6□□□□□ -1.19
SEC13YLR208W ENP1P38333 483 aaKnown RBP7.58□□□□□ -1.2
SEC13YLR208W RPN1P38764 993 aaKnown RBP7.58□□□□□ -1.2
SEC13YLR208W PEX21P50091 288 aa7.58□□□□□ -1.2
SEC13YLR208W SQS1P53866 767 aaKnown RBP7.58□□□□□ -1.2
SEC13YLR208W TOS1P38288 455 aa7.57□□□□□ -1.2
SEC13YLR208W PRP43P53131 767 aaKnown RBP7.57□□□□□ -1.2
SEC13YLR208W FRK1Q03002 865 aaPredicted RBP7.57□□□□□ -1.2
SEC13YLR208W APC1P53886 1748 aa7.57□□□□□ -1.2
SEC13YLR208W RPS24AP0CX31 135 aaKnown RBP7.56□□□□□ -1.2
SEC13YLR208W RPS24BP0CX32 135 aaKnown RBP7.56□□□□□ -1.2
SEC13YLR208W YLR419WQ06698 1435 aaKnown RBP7.55□□□□□ -1.2
SEC13YLR208W CSE4P36012 229 aa7.55□□□□□ -1.2
SEC13YLR208W MSN5P52918 1224 aa7.55□□□□□ -1.2
SEC13YLR208W KIN4Q01919 800 aa7.55□□□□□ -1.2
SEC13YLR208W YIL177CP40434 1758 aa7.55□□□□□ -1.2
SEC13YLR208W YJL225CP40889 1758 aa7.55□□□□□ -1.2
SEC13YLR208W MHP1P43638 1398 aa7.55□□□□□ -1.2
SEC13YLR208W ESL2P36168 1195 aa7.54□□□□□ -1.2
SEC13YLR208W YER156CP40093 338 aaKnown RBP7.54□□□□□ -1.2
SEC13YLR208W SAP155P43612 1002 aa7.54□□□□□ -1.2
SEC13YLR208W MSB4Q12317 492 aa7.54□□□□□ -1.2
SEC13YLR208W CTT1P06115 562 aa7.53□□□□□ -1.2
SEC13YLR208W ADE16P54113 591 aaKnown RBP7.52□□□□□ -1.21
SEC13YLR208W BUG1Q12191 341 aa7.52□□□□□ -1.21
SEC13YLR208W NSR1P27476 414 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
SEC13YLR208W RTG3P38165 486 aa7.51□□□□□ -1.21
SEC13YLR208W NOP7P53261 605 aaKnown RBP7.51□□□□□ -1.21
SEC13YLR208W MTR4P47047 1073 aaKnown RBP7.5□□□□□ -1.21
SEC13YLR208W LEU2P04173 364 aaPredicted RBP7.49□□□□□ -1.21
SEC13YLR208W DUS1P53759 423 aaKnown RBP7.49□□□□□ -1.21
SEC13YLR208W RPO41P13433 1351 aaKnown RBP7.48□□□□□ -1.21
SEC13YLR208W TOM1Q03280 3268 aa7.48□□□□□ -1.21
SEC13YLR208W ERT1P38140 529 aa7.48□□□□□ -1.21
SEC13YLR208W CHZ1P40019 153 aaPredicted RBP7.48□□□□□ -1.21
SEC13YLR208W YAP5P40574 245 aa7.48□□□□□ -1.21
SEC13YLR208W IOC4Q04213 475 aa7.48□□□□□ -1.21
SEC13YLR208W RIX7Q07844 837 aaKnown RBP7.48□□□□□ -1.21
SEC13YLR208W GRE2Q12068 342 aaKnown RBP7.48□□□□□ -1.21
SEC13YLR208W CWH41P53008 833 aa7.47□□□□□ -1.21
SEC13YLR208W UTP22P53254 1237 aaPredicted RBP7.47□□□□□ -1.21
SEC13YLR208W HPC2Q01448 625 aa7.47□□□□□ -1.21
SEC13YLR208W SIR4P11978 1358 aa7.46□□□□□ -1.21
SEC13YLR208W RAD4P14736 754 aa7.46□□□□□ -1.22
SEC13YLR208W YKL222CP35995 705 aa7.46□□□□□ -1.22
SEC13YLR208W RCR1P38212 213 aa7.46□□□□□ -1.22
SEC13YLR208W MEC3Q02574 474 aa7.46□□□□□ -1.22
SEC13YLR208W YOR238WQ08634 303 aa7.46□□□□□ -1.22
SEC13YLR208W SPE2P21182 396 aa7.45□□□□□ -1.22
SEC13YLR208W ETP1P38748 585 aaKnown RBP7.44□□□□□ -1.22
SEC13YLR208W FPK1P53739 893 aa7.43□□□□□ -1.22
SEC13YLR208W YML133CQ03099 1374 aa7.43□□□□□ -1.22
SEC13YLR208W YLL067CQ07888 1374 aa7.43□□□□□ -1.22
SEC13YLR208W YLL066CQ99208 1374 aa7.43□□□□□ -1.22
SEC13YLR208W MST1P07236 462 aa7.42□□□□□ -1.22
SEC13YLR208W POM152P39685 1337 aa7.42□□□□□ -1.22
SEC13YLR208W YLR278CQ05854 1341 aa7.42□□□□□ -1.22
SEC13YLR208W RIM15P43565 1770 aa7.41□□□□□ -1.22
SEC13YLR208W VPS29P38759 282 aa7.41□□□□□ -1.22
SEC13YLR208W YMR1P47147 688 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
SEC13YLR208W SLI15P38283 698 aa7.4□□□□□ -1.22
SEC13YLR208W ATG13Q06628 738 aa7.4□□□□□ -1.22
SEC13YLR208W THS1P04801 734 aaKnown RBP7.39□□□□□ -1.23
SEC13YLR208W SDH2P21801 266 aa7.39□□□□□ -1.23
SEC13YLR208W DPS1P04802 557 aaKnown RBP7.38□□□□□ -1.23
SEC13YLR208W GRX1P25373 110 aaKnown RBP7.38□□□□□ -1.23
SEC13YLR208W RRT14P40470 206 aa7.38□□□□□ -1.23
SEC13YLR208W KIP3P53086 805 aaKnown RBP7.38□□□□□ -1.23
SEC13YLR208W NYV1Q12255 253 aa7.38□□□□□ -1.23
SEC13YLR208W ORC1P54784 914 aaPredicted RBP7.37□□□□□ -1.23
SEC13YLR208W TOP1P04786 769 aa7.36□□□□□ -1.23
SEC13YLR208W GAS4Q08271 471 aa7.36□□□□□ -1.23
SEC13YLR208W OSM1P21375 501 aaKnown RBP7.35□□□□□ -1.23
SEC13YLR208W RET1P22276 1149 aaKnown RBP7.35□□□□□ -1.23
SEC13YLR208W DBP1P24784 617 aaKnown RBP7.35□□□□□ -1.23
SEC13YLR208W MAC1P35192 417 aa7.35□□□□□ -1.23
SEC13YLR208W UBP9P39967 754 aa7.35□□□□□ -1.23
SEC13YLR208W SMY1P32364 656 aaKnown RBP7.34□□□□□ -1.23
SEC13YLR208W INP54Q08227 384 aaKnown RBP7.34□□□□□ -1.23
SEC13YLR208W TUM1Q08686 304 aaKnown RBP7.34□□□□□ -1.23
SEC13YLR208W CTI6Q08923 506 aa7.34□□□□□ -1.23
SEC13YLR208W RAM2P29703 316 aa7.33□□□□□ -1.24
SEC13YLR208W ATG20Q07528 640 aa7.33□□□□□ -1.24
SEC13YLR208W VHR2P40041 505 aa7.32□□□□□ -1.24
SEC13YLR208W PIB1Q06651 286 aa7.32□□□□□ -1.24
SEC13YLR208W ICL1P28240 557 aaPredicted RBP7.31□□□□□ -1.24
SEC13YLR208W RTG2P32608 588 aaKnown RBP7.31□□□□□ -1.24
SEC13YLR208W PFF1P38244 976 aa7.31□□□□□ -1.24
SEC13YLR208W STS1P38637 319 aa7.3□□□□□ -1.24
SEC13YLR208W NST1P53935 1240 aa7.3□□□□□ -1.24
SEC13YLR208W MAK11P20484 414 aaKnown RBP7.29□□□□□ -1.24
SEC13YLR208W SHC1P39000 512 aa7.28□□□□□ -1.24
SEC13YLR208W YIL089WP40500 205 aa7.28□□□□□ -1.24
SEC13YLR208W YBP2P53169 641 aa7.28□□□□□ -1.24
SEC13YLR208W AUS1Q08409 1394 aa7.27□□□□□ -1.25
SEC13YLR208W YRB30P53107 440 aaPredicted RBP7.25□□□□□ -1.25
SEC13YLR208W ERO1Q03103 563 aa7.25□□□□□ -1.25
SEC13YLR208W RPS9BP05755 195 aaKnown RBP7.24□□□□□ -1.25
SEC13YLR208W GAP1P19145 602 aaPredicted RBP7.24□□□□□ -1.25
SEC13YLR208W SEC3P33332 1336 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms