RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W SQS1P53866 767 aaKnown RBP7.55□□□□□ -1.2
LDB18YLL049W KIN4Q01919 800 aa7.55□□□□□ -1.2
LDB18YLL049W RIM101P33400 625 aa7.54□□□□□ -1.2
LDB18YLL049W CSE4P36012 229 aa7.54□□□□□ -1.2
LDB18YLL049W YER156CP40093 338 aaKnown RBP7.54□□□□□ -1.2
LDB18YLL049W FRK1Q03002 865 aaPredicted RBP7.54□□□□□ -1.2
LDB18YLL049W TOM1Q03280 3268 aa7.53□□□□□ -1.2
LDB18YLL049W RPS24AP0CX31 135 aaKnown RBP7.53□□□□□ -1.2
LDB18YLL049W RPS24BP0CX32 135 aaKnown RBP7.53□□□□□ -1.2
LDB18YLL049W LEU2P04173 364 aaPredicted RBP7.52□□□□□ -1.21
LDB18YLL049W ERT1P38140 529 aa7.52□□□□□ -1.21
LDB18YLL049W UTP22P53254 1237 aaPredicted RBP7.52□□□□□ -1.21
LDB18YLL049W BUG1Q12191 341 aa7.52□□□□□ -1.21
LDB18YLL049W CHZ1P40019 153 aaPredicted RBP7.51□□□□□ -1.21
LDB18YLL049W MTR4P47047 1073 aaKnown RBP7.51□□□□□ -1.21
LDB18YLL049W DUS1P53759 423 aaKnown RBP7.51□□□□□ -1.21
LDB18YLL049W RAD4P14736 754 aa7.5□□□□□ -1.21
LDB18YLL049W NOP7P53261 605 aaKnown RBP7.5□□□□□ -1.21
LDB18YLL049W ADE16P54113 591 aaKnown RBP7.5□□□□□ -1.21
LDB18YLL049W MEC3Q02574 474 aa7.5□□□□□ -1.21
LDB18YLL049W YKL222CP35995 705 aa7.49□□□□□ -1.21
LDB18YLL049W GRE2Q12068 342 aaKnown RBP7.49□□□□□ -1.21
LDB18YLL049W RPO41P13433 1351 aaKnown RBP7.48□□□□□ -1.21
LDB18YLL049W RCR1P38212 213 aa7.47□□□□□ -1.21
LDB18YLL049W CWH41P53008 833 aa7.47□□□□□ -1.21
LDB18YLL049W FPK1P53739 893 aa7.47□□□□□ -1.21
LDB18YLL049W POM152P39685 1337 aa7.47□□□□□ -1.21
LDB18YLL049W SIR4P11978 1358 aa7.46□□□□□ -1.21
LDB18YLL049W HPC2Q01448 625 aa7.46□□□□□ -1.22
LDB18YLL049W SPE2P21182 396 aa7.45□□□□□ -1.22
LDB18YLL049W ETP1P38748 585 aaKnown RBP7.45□□□□□ -1.22
LDB18YLL049W RIX7Q07844 837 aaKnown RBP7.44□□□□□ -1.22
LDB18YLL049W NYV1Q12255 253 aa7.43□□□□□ -1.22
LDB18YLL049W RRT14P40470 206 aa7.42□□□□□ -1.22
LDB18YLL049W YLL066CQ99208 1374 aa7.42□□□□□ -1.22
LDB18YLL049W SDH2P21801 266 aa7.41□□□□□ -1.22
LDB18YLL049W ATG13Q06628 738 aa7.41□□□□□ -1.22
LDB18YLL049W YLR278CQ05854 1341 aa7.41□□□□□ -1.22
LDB18YLL049W GRX1P25373 110 aaKnown RBP7.4□□□□□ -1.22
LDB18YLL049W YML133CQ03099 1374 aa7.39□□□□□ -1.23
LDB18YLL049W YLL067CQ07888 1374 aa7.39□□□□□ -1.23
LDB18YLL049W SLI15P38283 698 aa7.39□□□□□ -1.23
LDB18YLL049W RET1P22276 1149 aaKnown RBP7.38□□□□□ -1.23
LDB18YLL049W MAC1P35192 417 aa7.38□□□□□ -1.23
LDB18YLL049W THS1P04801 734 aaKnown RBP7.37□□□□□ -1.23
LDB18YLL049W OSM1P21375 501 aaKnown RBP7.37□□□□□ -1.23
LDB18YLL049W SSP1P38871 571 aa7.36□□□□□ -1.23
LDB18YLL049W KIP3P53086 805 aaKnown RBP7.36□□□□□ -1.23
LDB18YLL049W ATG20Q07528 640 aa7.36□□□□□ -1.23
LDB18YLL049W DPS1P04802 557 aaKnown RBP7.35□□□□□ -1.23
LDB18YLL049W PFF1P38244 976 aa7.35□□□□□ -1.23
LDB18YLL049W FAS2P19097 1887 aaKnown RBP7.34□□□□□ -1.23
LDB18YLL049W RPS9BP05755 195 aaKnown RBP7.34□□□□□ -1.23
LDB18YLL049W NST1P53935 1240 aa7.34□□□□□ -1.23
LDB18YLL049W GAS4Q08271 471 aa7.34□□□□□ -1.23
LDB18YLL049W SMY1P32364 656 aaKnown RBP7.33□□□□□ -1.24
LDB18YLL049W RTG2P32608 588 aaKnown RBP7.33□□□□□ -1.24
LDB18YLL049W INP54Q08227 384 aaKnown RBP7.33□□□□□ -1.24
LDB18YLL049W TUM1Q08686 304 aaKnown RBP7.33□□□□□ -1.24
LDB18YLL049W TOP1P04786 769 aa7.32□□□□□ -1.24
LDB18YLL049W VHR2P40041 505 aa7.32□□□□□ -1.24
LDB18YLL049W SHC1P39000 512 aa7.31□□□□□ -1.24
LDB18YLL049W EPS1P40557 701 aa7.31□□□□□ -1.24
LDB18YLL049W CTI6Q08923 506 aa7.31□□□□□ -1.24
LDB18YLL049W ICL1P28240 557 aaPredicted RBP7.3□□□□□ -1.24
LDB18YLL049W YIL089WP40500 205 aa7.3□□□□□ -1.24
LDB18YLL049W PIB1Q06651 286 aa7.3□□□□□ -1.24
LDB18YLL049W SRF1Q12516 437 aa7.29□□□□□ -1.24
LDB18YLL049W YBP2P53169 641 aa7.28□□□□□ -1.24
LDB18YLL049W ERO1Q03103 563 aa7.28□□□□□ -1.24
LDB18YLL049W OXP1P28273 1286 aa7.27□□□□□ -1.25
LDB18YLL049W LEO1P38439 464 aa7.27□□□□□ -1.25
LDB18YLL049W FIG2P25653 1609 aa7.27□□□□□ -1.25
LDB18YLL049W UTP10P42945 1769 aaKnown RBP7.26□□□□□ -1.25
LDB18YLL049W PMD1P32634 1753 aa7.25□□□□□ -1.25
LDB18YLL049W AUS1Q08409 1394 aa7.25□□□□□ -1.25
LDB18YLL049W YKU70P32807 602 aa7.25□□□□□ -1.25
LDB18YLL049W TIF6Q12522 245 aaKnown RBP7.25□□□□□ -1.25
LDB18YLL049W MST1P07236 462 aa7.24□□□□□ -1.25
LDB18YLL049W PDI1P17967 522 aaKnown RBP7.24□□□□□ -1.25
LDB18YLL049W RTF1P53064 558 aa7.24□□□□□ -1.25
LDB18YLL049W SEC3P33332 1336 aaKnown RBP7.24□□□□□ -1.25
LDB18YLL049W LPD1P09624 499 aaKnown RBP7.23□□□□□ -1.25
LDB18YLL049W TYW1Q08960 810 aaKnown RBP7.23□□□□□ -1.25
LDB18YLL049W YBL029C-AQ3E756 94 aa7.23□□□□□ -1.25
LDB18YLL049W NUP145P49687 1317 aa7.23□□□□□ -1.25
LDB18YLL049W MLP1Q02455 1875 aaKnown RBP7.21□□□□□ -1.25
LDB18YLL049W GAP1P19145 602 aaPredicted RBP7.21□□□□□ -1.26
LDB18YLL049W FKH1P40466 484 aa7.21□□□□□ -1.26
LDB18YLL049W BUD27P43573 796 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
LDB18YLL049W TEA1P47988 759 aa7.21□□□□□ -1.26
LDB18YLL049W SIT4P20604 311 aa7.2□□□□□ -1.26
LDB18YLL049W GLC3P32775 704 aa7.2□□□□□ -1.26
LDB18YLL049W FET4P40988 552 aa7.2□□□□□ -1.26
LDB18YLL049W NCS6P53088 359 aa7.2□□□□□ -1.26
LDB18YLL049W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
LDB18YLL049W GRX4P32642 244 aa7.19□□□□□ -1.26
LDB18YLL049W PEA2P40091 420 aa7.19□□□□□ -1.26
LDB18YLL049W RAT1Q02792 1006 aaKnown RBP7.19□□□□□ -1.26
LDB18YLL049W TAP42Q04372 366 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms