RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W PRP40P33203 583 aaKnown RBP5.8□□□□□ -1.48
ABF1YKL112W TAF5P38129 798 aa5.8□□□□□ -1.48
ABF1YKL112W FPR3P38911 411 aaKnown RBP5.8□□□□□ -1.48
ABF1YKL112W SSP1P38871 571 aa5.79□□□□□ -1.48
ABF1YKL112W RIM15P43565 1770 aa5.79□□□□□ -1.48
ABF1YKL112W SPT7P35177 1332 aa5.79□□□□□ -1.48
ABF1YKL112W HSP82P02829 709 aaKnown RBP5.79□□□□□ -1.48
ABF1YKL112W CDC27P38042 758 aa5.79□□□□□ -1.48
ABF1YKL112W KIP3P53086 805 aaKnown RBP5.79□□□□□ -1.48
ABF1YKL112W PDR1P12383 1068 aa5.77□□□□□ -1.49
ABF1YKL112W DAL5P15365 543 aa5.77□□□□□ -1.49
ABF1YKL112W CPS1P27614 576 aa5.77□□□□□ -1.49
ABF1YKL112W YKR023WP36119 530 aaKnown RBP5.77□□□□□ -1.49
ABF1YKL112W GEF1P37020 779 aa5.77□□□□□ -1.49
ABF1YKL112W APC1P53886 1748 aa5.76□□□□□ -1.49
ABF1YKL112W SSA4P22202 642 aaKnown RBP5.76□□□□□ -1.49
ABF1YKL112W SSF1P38789 453 aaPredicted RBP5.76□□□□□ -1.49
ABF1YKL112W PEX21P50091 288 aa5.76□□□□□ -1.49
ABF1YKL112W ZDS1P50111 915 aaKnown RBP5.76□□□□□ -1.49
ABF1YKL112W PUS5Q06244 254 aa5.76□□□□□ -1.49
ABF1YKL112W YIL177CP40434 1758 aa5.76□□□□□ -1.49
ABF1YKL112W YJL225CP40889 1758 aa5.76□□□□□ -1.49
ABF1YKL112W ADE6P38972 1358 aaKnown RBP5.76□□□□□ -1.49
ABF1YKL112W BDF1P35817 686 aa5.75□□□□□ -1.49
ABF1YKL112W SPC42P36094 363 aa5.75□□□□□ -1.49
ABF1YKL112W MSB3P48566 633 aaPredicted RBP5.75□□□□□ -1.49
ABF1YKL112W NOP53Q12080 455 aaKnown RBP5.74□□□□□ -1.49
ABF1YKL112W YKR075CP36155 307 aa5.74□□□□□ -1.49
ABF1YKL112W NAB3P38996 802 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
ABF1YKL112W AIM21P40563 679 aa5.74□□□□□ -1.49
ABF1YKL112W ALD3P54114 506 aa5.74□□□□□ -1.49
ABF1YKL112W TCB1Q12466 1186 aa5.73□□□□□ -1.49
ABF1YKL112W TAF13P11747 167 aa5.73□□□□□ -1.49
ABF1YKL112W ENP1P38333 483 aaKnown RBP5.73□□□□□ -1.49
ABF1YKL112W RTC1Q08281 1341 aa5.73□□□□□ -1.49
ABF1YKL112W SLX8P40072 274 aa5.72□□□□□ -1.49
ABF1YKL112W RPT2P40327 437 aaKnown RBP5.72□□□□□ -1.49
ABF1YKL112W QCR6P00127 147 aa5.72□□□□□ -1.49
ABF1YKL112W GRX3Q03835 250 aa5.72□□□□□ -1.49
ABF1YKL112W TY4A-JP47023 414 aa5.71□□□□□ -1.5
ABF1YKL112W BRE1Q07457 700 aaKnown RBP5.71□□□□□ -1.5
ABF1YKL112W DOS2P54858 310 aa5.7□□□□□ -1.5
ABF1YKL112W COBP00163 385 aa5.7□□□□□ -1.5
ABF1YKL112W RNA1P11745 407 aaKnown RBP5.69□□□□□ -1.5
ABF1YKL112W EAF6P47128 113 aa5.69□□□□□ -1.5
ABF1YKL112W SLM3Q12093 417 aa5.69□□□□□ -1.5
ABF1YKL112W RAD2P07276 1031 aa5.68□□□□□ -1.5
ABF1YKL112W YKL133CP36066 463 aa5.68□□□□□ -1.5
ABF1YKL112W POM152P39685 1337 aa5.68□□□□□ -1.5
ABF1YKL112W HGH1P48362 394 aaKnown RBP5.68□□□□□ -1.5
ABF1YKL112W MHP1P43638 1398 aa5.67□□□□□ -1.5
ABF1YKL112W CTT1P06115 562 aa5.67□□□□□ -1.5
ABF1YKL112W GAL11P19659 1081 aa5.67□□□□□ -1.5
ABF1YKL112W TCB2P48231 1178 aa5.67□□□□□ -1.5
ABF1YKL112W SAP155P43612 1002 aa5.66□□□□□ -1.5
ABF1YKL112W SEC20P28791 383 aa5.66□□□□□ -1.5
ABF1YKL112W PAF1P38351 445 aa5.66□□□□□ -1.5
ABF1YKL112W HOS4P40480 1083 aa5.66□□□□□ -1.5
ABF1YKL112W DUS1P53759 423 aaKnown RBP5.66□□□□□ -1.5
ABF1YKL112W YRF1-4O13559 1382 aa5.65□□□□□ -1.5
ABF1YKL112W RCM1P53972 490 aa5.65□□□□□ -1.5
ABF1YKL112W RPA135P22138 1203 aaKnown RBP5.65□□□□□ -1.51
ABF1YKL112W PAM1P37304 830 aaKnown RBP5.65□□□□□ -1.51
ABF1YKL112W TOS1P38288 455 aa5.65□□□□□ -1.51
ABF1YKL112W PRP43P53131 767 aaKnown RBP5.65□□□□□ -1.51
ABF1YKL112W IKI3Q06706 1349 aaKnown RBP5.64□□□□□ -1.51
ABF1YKL112W PPH3P32345 308 aa5.64□□□□□ -1.51
ABF1YKL112W GIR2Q03768 265 aaPredicted RBP5.64□□□□□ -1.51
ABF1YKL112W PSK2Q08217 1101 aa5.64□□□□□ -1.51
ABF1YKL112W TFC8Q12308 588 aa5.64□□□□□ -1.51
ABF1YKL112W YLL066CQ99208 1374 aa5.64□□□□□ -1.51
ABF1YKL112W YER156CP40093 338 aaKnown RBP5.63□□□□□ -1.51
ABF1YKL112W YLR419WQ06698 1435 aaKnown RBP5.63□□□□□ -1.51
ABF1YKL112W HOP09932 586 aa5.63□□□□□ -1.51
ABF1YKL112W NSR1P27476 414 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51 RIP-Chip
ABF1YKL112W UTP22P53254 1237 aaPredicted RBP5.63□□□□□ -1.51
ABF1YKL112W MEH1Q02205 184 aa5.63□□□□□ -1.51
ABF1YKL112W UBX5Q06682 500 aa5.63□□□□□ -1.51
ABF1YKL112W MCM1P11746 286 aa5.62□□□□□ -1.51
ABF1YKL112W MPE1P35728 441 aaKnown RBP5.62□□□□□ -1.51
ABF1YKL112W RIM101P33400 625 aa5.62□□□□□ -1.51
ABF1YKL112W FUN12P39730 1002 aaKnown RBP5.62□□□□□ -1.51
ABF1YKL112W PEA2P40091 420 aa5.62□□□□□ -1.51
ABF1YKL112W YNL011CP53980 444 aa5.62□□□□□ -1.51
ABF1YKL112W MSB4Q12317 492 aa5.62□□□□□ -1.51
ABF1YKL112W ERT1P38140 529 aa5.61□□□□□ -1.51
ABF1YKL112W MSN5P52918 1224 aa5.61□□□□□ -1.51
ABF1YKL112W PIL1P53252 339 aaKnown RBP5.61□□□□□ -1.51
ABF1YKL112W FPK1P53739 893 aa5.61□□□□□ -1.51
ABF1YKL112W UBP10P53874 792 aaPredicted RBP5.61□□□□□ -1.51
ABF1YKL112W DCD1P06773 312 aa5.6□□□□□ -1.51
ABF1YKL112W HSC82P15108 705 aaKnown RBP5.6□□□□□ -1.51
ABF1YKL112W YKL222CP35995 705 aa5.6□□□□□ -1.51
ABF1YKL112W ETP1P38748 585 aaKnown RBP5.6□□□□□ -1.51
ABF1YKL112W PMC1P38929 1173 aaPredicted RBP5.6□□□□□ -1.51
ABF1YKL112W SQS1P53866 767 aaKnown RBP5.6□□□□□ -1.51
ABF1YKL112W FPR4Q06205 392 aaPredicted RBP5.6□□□□□ -1.51
ABF1YKL112W BUG1Q12191 341 aa5.6□□□□□ -1.51
ABF1YKL112W TOM1Q03280 3268 aa5.6□□□□□ -1.51
ABF1YKL112W CDC11P32458 415 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms