RNA–Protein interactions for RNA: YJL074C

SMC3, Transcript of Subunit of the multiprotein cohesin complex, yeast

Gene SMC3, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC3	YJL074C	MDG1	P53885	366 aa		4.1	□□□□□ -1.75
SMC3	YJL074C	GIN4	Q12263	1142 aa		4.1	□□□□□ -1.75
SMC3	YJL074C	DAL5	P15365	543 aa		4.09	□□□□□ -1.75
SMC3	YJL074C	MPE1	P35728	441 aa	Known RBP	4.09	□□□□□ -1.75
SMC3	YJL074C	CHZ1	P40019	153 aa	Predicted RBP	4.09	□□□□□ -1.75
SMC3	YJL074C	ALD4	P46367	519 aa	Known RBP	4.09	□□□□□ -1.75
SMC3	YJL074C	YPP1	P46951	817 aa		4.09	□□□□□ -1.75
SMC3	YJL074C	RAD50	P12753	1312 aa		4.09	□□□□□ -1.75
SMC3	YJL074C	TPD3	P31383	635 aa		4.09	□□□□□ -1.75
SMC3	YJL074C	NUG1	P40010	520 aa	Known RBP	4.09	□□□□□ -1.75
SMC3	YJL074C	LYS2	P07702	1392 aa		4.09	□□□□□ -1.75
SMC3	YJL074C	FAS2	P19097	1887 aa	Known RBP	4.09	□□□□□ -1.75
SMC3	YJL074C	CIR1	P42940	261 aa		4.09	□□□□□ -1.76
SMC3	YJL074C	MAK21	Q12176	1025 aa	Known RBP	4.09	□□□□□ -1.76
SMC3	YJL074C	TAF8	Q03750	510 aa		4.08	□□□□□ -1.76
SMC3	YJL074C	CWC22	P53333	577 aa	Known RBP	4.08	□□□□□ -1.76
SMC3	YJL074C	RTT109	Q07794	436 aa		4.08	□□□□□ -1.76
SMC3	YJL074C	RSC1	P53236	928 aa		4.07	□□□□□ -1.76
SMC3	YJL074C	HST1	P53685	503 aa		4.07	□□□□□ -1.76
SMC3	YJL074C	GCR2	Q01722	534 aa		4.07	□□□□□ -1.76
SMC3	YJL074C	CIN4	P39110	191 aa		4.07	□□□□□ -1.76
SMC3	YJL074C	SMC3	P47037	1230 aa		4.07	□□□□□ -1.76
SMC3	YJL074C	RPO41	P13433	1351 aa	Known RBP	4.06	□□□□□ -1.76
SMC3	YJL074C	RPN12	P32496	274 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	DLD1	P32891	587 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	TCD1	P38756	429 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	DOS2	P54858	310 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	PUF6	Q04373	656 aa	Known RBP	4.06	□□□□□ -1.76
SMC3	YJL074C	COG8	Q04632	607 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	KEX1	P09620	729 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	ASF1	P32447	279 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	STU2	P46675	888 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	TPO2	P53283	614 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	FAR11	P53917	953 aa		4.06	□□□□□ -1.76
SMC3	YJL074C	HRQ1	Q05549	1077 aa		4.05	□□□□□ -1.76
SMC3	YJL074C	CDC16	P09798	840 aa		4.05	□□□□□ -1.76
SMC3	YJL074C	MCM2	P29469	868 aa		4.05	□□□□□ -1.76
SMC3	YJL074C	PBY1	P38254	753 aa		4.05	□□□□□ -1.76
SMC3	YJL074C	NPA3	P47122	385 aa		4.05	□□□□□ -1.76
SMC3	YJL074C	SUB1	P54000	292 aa	Known RBP	4.05	□□□□□ -1.76
SMC3	YJL074C	RLP24	Q07915	199 aa	Known RBP	4.05	□□□□□ -1.76
SMC3	YJL074C	TRP5	P00931	707 aa	Known RBP	4.05	□□□□□ -1.76
SMC3	YJL074C	ILV3	P39522	585 aa	Known RBP	4.05	□□□□□ -1.76
SMC3	YJL074C	HOS3	Q02959	697 aa	Known RBP	4.05	□□□□□ -1.76
SMC3	YJL074C	LAM6	Q08001	693 aa		4.05	□□□□□ -1.76
SMC3	YJL074C	RVS167	P39743	482 aa	Known RBP	4.04	□□□□□ -1.76
SMC3	YJL074C	VPS72	Q03388	795 aa		4.04	□□□□□ -1.76
SMC3	YJL074C	NKP2	Q06162	153 aa		4.04	□□□□□ -1.76
SMC3	YJL074C	SSP1	P38871	571 aa		4.04	□□□□□ -1.76
SMC3	YJL074C	RIX1	P38883	763 aa	Predicted RBP	4.04	□□□□□ -1.76
SMC3	YJL074C	TPM2	P40414	161 aa		4.04	□□□□□ -1.76
SMC3	YJL074C	OSW7	P43611	510 aa		4.04	□□□□□ -1.76
SMC3	YJL074C	NOP14	Q99207	810 aa	Known RBP	4.04	□□□□□ -1.76
SMC3	YJL074C	KAR2	P16474	682 aa	Known RBP	4.03	□□□□□ -1.76
SMC3	YJL074C	IPL1	P38991	367 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	SLX8	P40072	274 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	GRX4	P32642	244 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	LTV1	P34078	463 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	SPT21	P35209	758 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	CEP3	P40969	608 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	HIM1	Q06674	414 aa		4.03	□□□□□ -1.76
SMC3	YJL074C	YRF1-3	P0CX14	1859 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	YRF1-7	P0CX15	1859 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	YRF1-6	P53819	1859 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	TRL1	P09880	827 aa	Known RBP	4.02	□□□□□ -1.77
SMC3	YJL074C	ELM1	P32801	640 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	TYS1	P36421	394 aa	Known RBP	4.02	□□□□□ -1.77
SMC3	YJL074C	ESC2	Q06340	456 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	CSE4	P36012	229 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	BRN1	P38170	754 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	RPS19A	P07280	144 aa	Known RBP	4.02	□□□□□ -1.77
SMC3	YJL074C	RPS19B	P07281	144 aa	Predicted RBP	4.02	□□□□□ -1.77
SMC3	YJL074C	RNR2	P09938	399 aa	Known RBP	4.02	□□□□□ -1.77
SMC3	YJL074C	TAF13	P11747	167 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	PDI1	P17967	522 aa	Known RBP	4.02	□□□□□ -1.77
SMC3	YJL074C	TOA1	P32773	286 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	RSM25	P40496	264 aa		4.02	□□□□□ -1.77
SMC3	YJL074C	RAD26	P40352	1085 aa		4.01	□□□□□ -1.77
SMC3	YJL074C	YOL087C	Q99247	1116 aa		4.01	□□□□□ -1.77
SMC3	YJL074C	VPS60	Q03390	229 aa		4.01	□□□□□ -1.77
SMC3	YJL074C	GCD7	P32502	381 aa	Predicted RBP	4.01	□□□□□ -1.77
SMC3	YJL074C	MRX12	P47084	519 aa		4.01	□□□□□ -1.77
SMC3	YJL074C	PAM1	P37304	830 aa	Known RBP	4	□□□□□ -1.77
SMC3	YJL074C	YNL050C	P53952	270 aa		4	□□□□□ -1.77
SMC3	YJL074C	VPS20	Q04272	221 aa		4	□□□□□ -1.77
SMC3	YJL074C	ADE6	P38972	1358 aa	Known RBP	4	□□□□□ -1.77
SMC3	YJL074C	SPC42	P36094	363 aa		4	□□□□□ -1.77
SMC3	YJL074C	MIC60	P36112	540 aa		4	□□□□□ -1.77
SMC3	YJL074C	PRP43	P53131	767 aa	Known RBP	4	□□□□□ -1.77
SMC3	YJL074C	HXT13	P39924	564 aa		4	□□□□□ -1.77
SMC3	YJL074C	CWH41	P53008	833 aa		4	□□□□□ -1.77
SMC3	YJL074C	RTS3	P53289	263 aa		4	□□□□□ -1.77
SMC3	YJL074C	CAB1	Q04430	367 aa		4	□□□□□ -1.77
SMC3	YJL074C	CYC8	P14922	966 aa		3.99	□□□□□ -1.77
SMC3	YJL074C	MSH1	P25846	959 aa		3.99	□□□□□ -1.77
SMC3	YJL074C	DSD1	P53095	428 aa		3.99	□□□□□ -1.77
SMC3	YJL074C	PSH1	Q12161	406 aa		3.99	□□□□□ -1.77
SMC3	YJL074C	HGH1	P48362	394 aa	Known RBP	3.99	□□□□□ -1.77
SMC3	YJL074C	GYP7	P48365	746 aa		3.99	□□□□□ -1.77
SMC3	YJL074C	PPH3	P32345	308 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms