RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C YGL140CP53120 1219 aa4.05□□□□□ -1.76
SPT4YGR063C SNU71P53207 620 aaKnown RBP4.05□□□□□ -1.76
SPT4YGR063C SNF2P22082 1703 aa4.04□□□□□ -1.76
SPT4YGR063C RPC82P32349 654 aa4.04□□□□□ -1.76
SPT4YGR063C SPT16P32558 1035 aaKnown RBP4.04□□□□□ -1.76
SPT4YGR063C SCT1P32784 759 aa4.04□□□□□ -1.76
SPT4YGR063C RRP14P36080 434 aaKnown RBP4.04□□□□□ -1.76
SPT4YGR063C BUD27P43573 796 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
SPT4YGR063C RSC8P43609 557 aaKnown RBP4.04□□□□□ -1.76
SPT4YGR063C VID30P53076 958 aa4.04□□□□□ -1.76
SPT4YGR063C MDG1P53885 366 aa4.04□□□□□ -1.76
SPT4YGR063C KRE33P53914 1056 aaKnown RBP4.04□□□□□ -1.76
SPT4YGR063C YMR102CQ03177 834 aa4.04□□□□□ -1.76
SPT4YGR063C UTP13Q05946 817 aaKnown RBP4.04□□□□□ -1.76
SPT4YGR063C ORM2Q06144 216 aa4.04□□□□□ -1.76
SPT4YGR063C YDL144CQ07589 356 aa4.04□□□□□ -1.76
SPT4YGR063C HIF1Q12373 385 aa4.04□□□□□ -1.76
SPT4YGR063C YSP2Q06681 1438 aa4.04□□□□□ -1.76
SPT4YGR063C SRS2P12954 1174 aa4.03□□□□□ -1.76
SPT4YGR063C SUI2P20459 304 aaKnown RBP4.03□□□□□ -1.76
SPT4YGR063C MRC1P25588 1096 aa4.03□□□□□ -1.76
SPT4YGR063C SPT5P27692 1063 aaKnown RBP4.03□□□□□ -1.76
SPT4YGR063C CDC11P32458 415 aa4.03□□□□□ -1.76
SPT4YGR063C RPN12P32496 274 aa4.03□□□□□ -1.76
SPT4YGR063C MIC60P36112 540 aa4.03□□□□□ -1.76
SPT4YGR063C BDH2P39713 417 aa4.03□□□□□ -1.76
SPT4YGR063C RRT14P40470 206 aa4.03□□□□□ -1.76
SPT4YGR063C MGA2P40578 1113 aa4.03□□□□□ -1.76
SPT4YGR063C IAH1P41734 238 aa4.03□□□□□ -1.76
SPT4YGR063C NDL1Q06568 189 aa4.03□□□□□ -1.76
SPT4YGR063C PDR12Q02785 1511 aa4.03□□□□□ -1.76
SPT4YGR063C TY1B-DR3Q99231 1755 aa4.02□□□□□ -1.77
SPT4YGR063C TOP1P04786 769 aa4.02□□□□□ -1.77
SPT4YGR063C PSO2P30620 661 aa4.02□□□□□ -1.77
SPT4YGR063C VPS41P38959 992 aa4.02□□□□□ -1.77
SPT4YGR063C PEA2P40091 420 aa4.02□□□□□ -1.77
SPT4YGR063C HYR1P40581 163 aaKnown RBP4.02□□□□□ -1.77
SPT4YGR063C YMR1P47147 688 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SPT4YGR063C PAP2P53632 584 aaKnown RBP4.02□□□□□ -1.77
SPT4YGR063C HST1P53685 503 aa4.02□□□□□ -1.77
SPT4YGR063C YOR389WQ08912 624 aa4.02□□□□□ -1.77
SPT4YGR063C YLL054CQ12244 843 aa4.02□□□□□ -1.77
SPT4YGR063C SNT2P53127 1403 aa4.02□□□□□ -1.77
SPT4YGR063C CYC8P14922 966 aa4.01□□□□□ -1.77
SPT4YGR063C SPB4P25808 606 aaPredicted RBP4.01□□□□□ -1.77
SPT4YGR063C RAD16P31244 790 aa4.01□□□□□ -1.77
SPT4YGR063C PSE1P32337 1089 aaKnown RBP4.01□□□□□ -1.77
SPT4YGR063C NAB3P38996 802 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SPT4YGR063C HOS4P40480 1083 aa4.01□□□□□ -1.77
SPT4YGR063C CIR1P42940 261 aa4.01□□□□□ -1.77
SPT4YGR063C CST9Q06032 482 aa4.01□□□□□ -1.77
SPT4YGR063C NHA1Q99271 985 aa4.01□□□□□ -1.77
SPT4YGR063C RAD50P12753 1312 aa4□□□□□ -1.77
SPT4YGR063C NUP145P49687 1317 aa4□□□□□ -1.77
SPT4YGR063C TY4B-PA0A0B7P3V8 1104 aa4□□□□□ -1.77
SPT4YGR063C ARD1P07347 238 aaPredicted RBP4□□□□□ -1.77
SPT4YGR063C KEX1P09620 729 aa4□□□□□ -1.77
SPT4YGR063C TAF13P11747 167 aa4□□□□□ -1.77
SPT4YGR063C PET123P17558 318 aa4□□□□□ -1.77
SPT4YGR063C RVS167P39743 482 aaKnown RBP4□□□□□ -1.77
SPT4YGR063C RSM25P40496 264 aa4□□□□□ -1.77
SPT4YGR063C MVP1P40959 511 aaKnown RBP4□□□□□ -1.77
SPT4YGR063C MPP10P47083 593 aaKnown RBP4□□□□□ -1.77
SPT4YGR063C SIR4P11978 1358 aa4□□□□□ -1.77
SPT4YGR063C PDR11P40550 1411 aa3.99□□□□□ -1.77
SPT4YGR063C SEC14P24280 304 aaKnown RBP3.99□□□□□ -1.77
SPT4YGR063C HSP104P31539 908 aaKnown RBP3.99□□□□□ -1.77
SPT4YGR063C PUP2P32379 260 aa3.99□□□□□ -1.77
SPT4YGR063C RFC1P38630 861 aaKnown RBP3.99□□□□□ -1.77
SPT4YGR063C BDP1P46678 594 aa3.99□□□□□ -1.77
SPT4YGR063C POL32P47110 350 aa3.99□□□□□ -1.77
SPT4YGR063C YNL035CP53962 389 aaKnown RBP3.99□□□□□ -1.77
SPT4YGR063C STE20Q03497 939 aaKnown RBP3.99□□□□□ -1.77
SPT4YGR063C INP2Q03824 705 aa3.99□□□□□ -1.77
SPT4YGR063C PUF6Q04373 656 aaKnown RBP3.99□□□□□ -1.77
SPT4YGR063C NFI1Q12216 726 aa3.99□□□□□ -1.77
SPT4YGR063C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
SPT4YGR063C LYS2P07702 1392 aa3.99□□□□□ -1.77
SPT4YGR063C CDC25P04821 1589 aa3.98□□□□□ -1.77
SPT4YGR063C HSC82P15108 705 aaKnown RBP3.98□□□□□ -1.77
SPT4YGR063C CLN1P20437 546 aa3.98□□□□□ -1.77
SPT4YGR063C MRPS28P21771 286 aa3.98□□□□□ -1.77
SPT4YGR063C MRM1P25270 412 aa3.98□□□□□ -1.77
SPT4YGR063C MRPL10P36520 322 aa3.98□□□□□ -1.77
SPT4YGR063C SAP1P39955 897 aaKnown RBP3.98□□□□□ -1.77
SPT4YGR063C YIL092WP40497 633 aa3.98□□□□□ -1.77
SPT4YGR063C GGA1Q06336 557 aa3.98□□□□□ -1.77
SPT4YGR063C PEX19Q07418 342 aa3.98□□□□□ -1.77
SPT4YGR063C RAV1P47104 1357 aa3.98□□□□□ -1.77
SPT4YGR063C YOR093CQ12275 1648 aa3.98□□□□□ -1.77
SPT4YGR063C TY2B-LR1P0C2J3 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-FP0CX63 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-GR2P0CX64 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-CP25384 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-DR2Q03494 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY1B-DR1Q03855 1755 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-DR3Q07791 1770 aaKnown RBP3.97□□□□□ -1.77
SPT4YGR063C TY2B-OR1Q12113 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-DR1Q12472 1770 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-OR2Q12501 1770 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 1547.8 ms