RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C AOS1Q06624 347 aa7.94□□□□□ -1.14
YPT1YFL038C RRP5Q05022 1729 aaKnown RBP7.94□□□□□ -1.14
YPT1YFL038C RPS19AP07280 144 aaKnown RBP7.93□□□□□ -1.14
YPT1YFL038C RPS19BP07281 144 aaPredicted RBP7.93□□□□□ -1.14
YPT1YFL038C PRP5P21372 849 aaPredicted RBP7.93□□□□□ -1.14
YPT1YFL038C BMS1Q08965 1183 aaKnown RBP7.93□□□□□ -1.14
YPT1YFL038C SLM3Q12093 417 aa7.93□□□□□ -1.14
YPT1YFL038C PCT1P13259 424 aa7.92□□□□□ -1.14
YPT1YFL038C YIL177CP40434 1758 aa7.92□□□□□ -1.14
YPT1YFL038C YJL225CP40889 1758 aa7.92□□□□□ -1.14
YPT1YFL038C UGA3P26370 528 aa7.91□□□□□ -1.14
YPT1YFL038C YNG2P38806 282 aaKnown RBP7.91□□□□□ -1.14
YPT1YFL038C SNF7P39929 240 aaKnown RBP7.91□□□□□ -1.14
YPT1YFL038C CSI1Q04368 295 aa7.91□□□□□ -1.14
YPT1YFL038C COQ4O13525 335 aa7.9□□□□□ -1.14
YPT1YFL038C NSE3Q05541 303 aa7.9□□□□□ -1.14
YPT1YFL038C LYS2P07702 1392 aa7.89□□□□□ -1.15
YPT1YFL038C PRP45P28004 379 aaPredicted RBP7.89□□□□□ -1.15
YPT1YFL038C YBR287WP38355 427 aa7.89□□□□□ -1.15
YPT1YFL038C ILV3P39522 585 aaKnown RBP7.89□□□□□ -1.15
YPT1YFL038C MSB3P48566 633 aaPredicted RBP7.88□□□□□ -1.15
YPT1YFL038C YOL057WQ08225 711 aa7.88□□□□□ -1.15
YPT1YFL038C URB1P34241 1764 aaKnown RBP7.87□□□□□ -1.15
YPT1YFL038C FKS3Q04952 1785 aa7.87□□□□□ -1.15
YPT1YFL038C ROX1P25042 368 aa7.87□□□□□ -1.15
YPT1YFL038C KCC4P25389 1037 aa7.87□□□□□ -1.15
YPT1YFL038C VPS24P36095 224 aaKnown RBP7.87□□□□□ -1.15
YPT1YFL038C RCR1P38212 213 aa7.87□□□□□ -1.15
YPT1YFL038C PTP3P40048 928 aa7.87□□□□□ -1.15
YPT1YFL038C SPO1P53541 631 aa7.87□□□□□ -1.15
YPT1YFL038C LSP1Q12230 341 aaKnown RBP7.87□□□□□ -1.15
YPT1YFL038C RAD50P12753 1312 aa7.86□□□□□ -1.15
YPT1YFL038C NKP2Q06162 153 aa7.86□□□□□ -1.15
YPT1YFL038C GCD7P32502 381 aaPredicted RBP7.85□□□□□ -1.15
YPT1YFL038C NMD2P38798 1089 aaKnown RBP7.85□□□□□ -1.15
YPT1YFL038C XKS1P42826 600 aa7.85□□□□□ -1.15
YPT1YFL038C HGH1P48362 394 aaKnown RBP7.85□□□□□ -1.15
YPT1YFL038C TCB1Q12466 1186 aa7.85□□□□□ -1.15
YPT1YFL038C NUP145P49687 1317 aa7.84□□□□□ -1.15
YPT1YFL038C CDC16P09798 840 aa7.84□□□□□ -1.15
YPT1YFL038C RFC1P38630 861 aaKnown RBP7.84□□□□□ -1.15
YPT1YFL038C NOP8Q08287 484 aaPredicted RBP7.84□□□□□ -1.15
YPT1YFL038C RAD4P14736 754 aa7.83□□□□□ -1.16
YPT1YFL038C RAD24P32641 659 aa7.83□□□□□ -1.16
YPT1YFL038C GCR2Q01722 534 aa7.83□□□□□ -1.16
YPT1YFL038C YDR306CQ06640 478 aa7.83□□□□□ -1.16
YPT1YFL038C INP54Q08227 384 aaKnown RBP7.83□□□□□ -1.16
YPT1YFL038C MRP7P12687 371 aa7.82□□□□□ -1.16
YPT1YFL038C DLD1P32891 587 aa7.82□□□□□ -1.16
YPT1YFL038C RLF2Q12495 606 aa7.82□□□□□ -1.16
YPT1YFL038C MSP1P28737 362 aa7.81□□□□□ -1.16
YPT1YFL038C BOI2P39969 1040 aa7.81□□□□□ -1.16
YPT1YFL038C RSF2P46974 1380 aa7.81□□□□□ -1.16
YPT1YFL038C BRN1P38170 754 aa7.8□□□□□ -1.16
YPT1YFL038C DJP1P40564 432 aa7.8□□□□□ -1.16
YPT1YFL038C ITC1P53125 1264 aa7.8□□□□□ -1.16
YPT1YFL038C YGR122WP53272 402 aa7.8□□□□□ -1.16
YPT1YFL038C DNM1P54861 757 aa7.8□□□□□ -1.16
YPT1YFL038C YPR148CQ06523 435 aa7.8□□□□□ -1.16
YPT1YFL038C ROM2P51862 1356 aaKnown RBP7.8□□□□□ -1.16
YPT1YFL038C YJR008WP47085 338 aa7.79□□□□□ -1.16
YPT1YFL038C SRS2P12954 1174 aa7.78□□□□□ -1.16
YPT1YFL038C CST6P40535 587 aa7.78□□□□□ -1.16
YPT1YFL038C MEC3Q02574 474 aa7.78□□□□□ -1.16
YPT1YFL038C OSM1P21375 501 aaKnown RBP7.77□□□□□ -1.17
YPT1YFL038C SWC3P31376 625 aa7.77□□□□□ -1.17
YPT1YFL038C SLN1P39928 1220 aaPredicted RBP7.77□□□□□ -1.17
YPT1YFL038C ALE1Q08548 619 aa7.77□□□□□ -1.17
YPT1YFL038C VAS1P07806 1104 aaKnown RBP7.76□□□□□ -1.17
YPT1YFL038C ARL1P38116 183 aaKnown RBP7.76□□□□□ -1.17
YPT1YFL038C TEA1P47988 759 aa7.76□□□□□ -1.17
YPT1YFL038C HXT13P39924 564 aa7.75□□□□□ -1.17
YPT1YFL038C ZDS2P54786 942 aa7.75□□□□□ -1.17
YPT1YFL038C HAP5Q02516 242 aa7.75□□□□□ -1.17
YPT1YFL038C NUP133P36161 1157 aa7.74□□□□□ -1.17
YPT1YFL038C IES2P40154 320 aa7.74□□□□□ -1.17
YPT1YFL038C BDP1P46678 594 aa7.74□□□□□ -1.17
YPT1YFL038C ADE16P54113 591 aaKnown RBP7.74□□□□□ -1.17
YPT1YFL038C SWI1P09547 1314 aa7.74□□□□□ -1.17
YPT1YFL038C SSF1P38789 453 aaPredicted RBP7.73□□□□□ -1.17
YPT1YFL038C UBP12P39538 1254 aa7.73□□□□□ -1.17
YPT1YFL038C HXT17P53631 564 aa7.73□□□□□ -1.17
YPT1YFL038C ENT1Q12518 454 aa7.73□□□□□ -1.17
YPT1YFL038C RNR2P09938 399 aaKnown RBP7.72□□□□□ -1.17
YPT1YFL038C SET1P38827 1080 aaKnown RBP7.72□□□□□ -1.17
YPT1YFL038C BDH2P39713 417 aa7.72□□□□□ -1.17
YPT1YFL038C RMT2Q03305 412 aa7.72□□□□□ -1.17
YPT1YFL038C COG8Q04632 607 aa7.72□□□□□ -1.17
YPT1YFL038C NCB2Q92317 146 aa7.72□□□□□ -1.17
YPT1YFL038C YRF1-3P0CX14 1859 aa7.71□□□□□ -1.18
YPT1YFL038C YRF1-7P0CX15 1859 aa7.71□□□□□ -1.18
YPT1YFL038C YRF1-6P53819 1859 aa7.71□□□□□ -1.18
YPT1YFL038C NOT3P06102 836 aaKnown RBP7.71□□□□□ -1.18
YPT1YFL038C LPD1P09624 499 aaKnown RBP7.71□□□□□ -1.18
YPT1YFL038C TRL1P09880 827 aaKnown RBP7.71□□□□□ -1.18
YPT1YFL038C REB1P21538 810 aa7.71□□□□□ -1.18
YPT1YFL038C MIF2P35201 549 aa7.71□□□□□ -1.18
YPT1YFL038C YKL133CP36066 463 aa7.71□□□□□ -1.18
YPT1YFL038C ECM21P38167 1117 aaKnown RBP7.71□□□□□ -1.18
YPT1YFL038C YBP2P53169 641 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms