RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C BMS1Q08965 1183 aaKnown RBP12.95□□□□□ -0.34
CCA1YER168C YPP1P46951 817 aa12.94□□□□□ -0.34
CCA1YER168C AOS1Q06624 347 aa12.94□□□□□ -0.34
CCA1YER168C COQ4O13525 335 aa12.92□□□□□ -0.34
CCA1YER168C PRP5P21372 849 aaPredicted RBP12.92□□□□□ -0.34
CCA1YER168C SLM3Q12093 417 aa12.92□□□□□ -0.34
CCA1YER168C YNG2P38806 282 aaKnown RBP12.91□□□□□ -0.34
CCA1YER168C MSB3P48566 633 aaPredicted RBP12.9□□□□□ -0.34
CCA1YER168C SPO1P53541 631 aa12.9□□□□□ -0.34
CCA1YER168C CTF4Q01454 927 aa12.9□□□□□ -0.34
CCA1YER168C SNF7P39929 240 aaKnown RBP12.89□□□□□ -0.35
CCA1YER168C ECM16Q04217 1267 aaKnown RBP12.89□□□□□ -0.35
CCA1YER168C RPS19AP07280 144 aaKnown RBP12.88□□□□□ -0.35
CCA1YER168C RPS19BP07281 144 aaPredicted RBP12.88□□□□□ -0.35
CCA1YER168C PRP45P28004 379 aaPredicted RBP12.88□□□□□ -0.35
CCA1YER168C NKP2Q06162 153 aa12.86□□□□□ -0.35
CCA1YER168C UGA3P26370 528 aa12.85□□□□□ -0.35
CCA1YER168C LYS2P07702 1392 aa12.85□□□□□ -0.35
CCA1YER168C ROX1P25042 368 aa12.84□□□□□ -0.35
CCA1YER168C RCR1P38212 213 aa12.84□□□□□ -0.35
CCA1YER168C YGR122WP53272 402 aa12.84□□□□□ -0.35
CCA1YER168C NSE3Q05541 303 aa12.84□□□□□ -0.35
CCA1YER168C RAD24P32641 659 aa12.84□□□□□ -0.35
CCA1YER168C NMD2P38798 1089 aaKnown RBP12.84□□□□□ -0.35
CCA1YER168C DJP1P40564 432 aa12.84□□□□□ -0.35
CCA1YER168C XKS1P42826 600 aa12.84□□□□□ -0.35
CCA1YER168C YPR148CQ06523 435 aa12.84□□□□□ -0.35
CCA1YER168C RAD50P12753 1312 aa12.84□□□□□ -0.35
CCA1YER168C KCC4P25389 1037 aa12.83□□□□□ -0.36
CCA1YER168C RLF2Q12495 606 aa12.83□□□□□ -0.36
CCA1YER168C NUP145P49687 1317 aa12.83□□□□□ -0.36
CCA1YER168C YOL057WQ08225 711 aa12.82□□□□□ -0.36
CCA1YER168C VPS24P36095 224 aaKnown RBP12.8□□□□□ -0.36
CCA1YER168C RFC1P38630 861 aaKnown RBP12.8□□□□□ -0.36
CCA1YER168C PTP3P40048 928 aa12.8□□□□□ -0.36
CCA1YER168C INP54Q08227 384 aaKnown RBP12.8□□□□□ -0.36
CCA1YER168C TCB1Q12466 1186 aa12.8□□□□□ -0.36
CCA1YER168C RAD4P14736 754 aa12.79□□□□□ -0.36
CCA1YER168C MRP7P12687 371 aa12.78□□□□□ -0.36
CCA1YER168C NOP8Q08287 484 aaPredicted RBP12.78□□□□□ -0.36
CCA1YER168C GCD7P32502 381 aaPredicted RBP12.77□□□□□ -0.36
CCA1YER168C DLD1P32891 587 aa12.77□□□□□ -0.36
CCA1YER168C GCR2Q01722 534 aa12.77□□□□□ -0.36
CCA1YER168C YDR306CQ06640 478 aa12.77□□□□□ -0.36
CCA1YER168C LSP1Q12230 341 aaKnown RBP12.77□□□□□ -0.36
CCA1YER168C RSF2P46974 1380 aa12.76□□□□□ -0.37
CCA1YER168C SWC3P31376 625 aa12.75□□□□□ -0.37
CCA1YER168C BRN1P38170 754 aa12.75□□□□□ -0.37
CCA1YER168C BOI2P39969 1040 aa12.75□□□□□ -0.37
CCA1YER168C CDC16P09798 840 aa12.74□□□□□ -0.37
CCA1YER168C MSP1P28737 362 aa12.74□□□□□ -0.37
CCA1YER168C ALE1Q08548 619 aa12.73□□□□□ -0.37
CCA1YER168C ROM2P51862 1356 aaKnown RBP12.73□□□□□ -0.37
CCA1YER168C ITC1P53125 1264 aa12.73□□□□□ -0.37
CCA1YER168C ZDS2P54786 942 aa12.73□□□□□ -0.37
CCA1YER168C SRS2P12954 1174 aa12.72□□□□□ -0.37
CCA1YER168C SLN1P39928 1220 aaPredicted RBP12.72□□□□□ -0.37
CCA1YER168C HXT13P39924 564 aa12.7□□□□□ -0.38
CCA1YER168C HGH1P48362 394 aaKnown RBP12.7□□□□□ -0.38
CCA1YER168C HXT17P53631 564 aa12.69□□□□□ -0.38
CCA1YER168C ADE16P54113 591 aaKnown RBP12.69□□□□□ -0.38
CCA1YER168C NUP133P36161 1157 aa12.68□□□□□ -0.38
CCA1YER168C SWI1P09547 1314 aa12.68□□□□□ -0.38
CCA1YER168C BDP1P46678 594 aa12.67□□□□□ -0.38
CCA1YER168C DNM1P54861 757 aa12.67□□□□□ -0.38
CCA1YER168C OSM1P21375 501 aaKnown RBP12.66□□□□□ -0.38
CCA1YER168C CST6P40535 587 aa12.66□□□□□ -0.38
CCA1YER168C TEA1P47988 759 aa12.66□□□□□ -0.38
CCA1YER168C MEC3Q02574 474 aa12.66□□□□□ -0.38
CCA1YER168C YRF1-3P0CX14 1859 aa12.65□□□□□ -0.38
CCA1YER168C YRF1-7P0CX15 1859 aa12.65□□□□□ -0.38
CCA1YER168C YRF1-6P53819 1859 aa12.65□□□□□ -0.38
CCA1YER168C VAS1P07806 1104 aaKnown RBP12.65□□□□□ -0.38
CCA1YER168C ARL1P38116 183 aaKnown RBP12.64□□□□□ -0.39
CCA1YER168C REB1P21538 810 aa12.63□□□□□ -0.39
CCA1YER168C MIF2P35201 549 aa12.63□□□□□ -0.39
CCA1YER168C YJR008WP47085 338 aa12.63□□□□□ -0.39
CCA1YER168C IES2P40154 320 aa12.62□□□□□ -0.39
CCA1YER168C NPA3P47122 385 aa12.62□□□□□ -0.39
CCA1YER168C KNS1P32350 737 aaPredicted RBP12.61□□□□□ -0.39
CCA1YER168C FRK1Q03002 865 aaPredicted RBP12.61□□□□□ -0.39
CCA1YER168C ENT1Q12518 454 aa12.61□□□□□ -0.39
CCA1YER168C DUR1,2P32528 1835 aaKnown RBP12.6□□□□□ -0.39
CCA1YER168C TRL1P09880 827 aaKnown RBP12.6□□□□□ -0.39
CCA1YER168C RNR2P09938 399 aaKnown RBP12.6□□□□□ -0.39
CCA1YER168C LPD1P09624 499 aaKnown RBP12.59□□□□□ -0.39
CCA1YER168C UBP12P39538 1254 aa12.59□□□□□ -0.39
CCA1YER168C ECM21P38167 1117 aaKnown RBP12.59□□□□□ -0.39
CCA1YER168C HAP5Q02516 242 aa12.59□□□□□ -0.39
CCA1YER168C RMT2Q03305 412 aa12.59□□□□□ -0.39
CCA1YER168C VPS64Q03944 604 aa12.59□□□□□ -0.39
CCA1YER168C VPS20Q04272 221 aa12.59□□□□□ -0.39
CCA1YER168C YKL133CP36066 463 aa12.58□□□□□ -0.4
CCA1YER168C YBP2P53169 641 aa12.58□□□□□ -0.4
CCA1YER168C NCB2Q92317 146 aa12.58□□□□□ -0.4
CCA1YER168C NOT3P06102 836 aaKnown RBP12.57□□□□□ -0.4
CCA1YER168C RMD1Q03441 430 aa12.57□□□□□ -0.4
CCA1YER168C ATG13Q06628 738 aa12.57□□□□□ -0.4
CCA1YER168C PDR18P53756 1333 aa12.56□□□□□ -0.4
CCA1YER168C APL2P36000 726 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms