RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W TY1A-BRQ12217 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-NL2Q12470 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-GR2Q12485 440 aa8.76□□□□□ -1.01
TRP1YDR007W STM1P39015 273 aaKnown RBP8.75□□□□□ -1.01
TRP1YDR007W BUD20Q08004 166 aaPredicted RBP8.75□□□□□ -1.01
TRP1YDR007W AIR2Q12476 344 aaKnown RBP8.75□□□□□ -1.01
TRP1YDR007W YEL077CQ3E7X8 1277 aa8.75□□□□□ -1.01
TRP1YDR007W PHO87P25360 923 aa8.74□□□□□ -1.01
TRP1YDR007W YBL113CQ7M4S9 792 aa8.74□□□□□ -1.01
TRP1YDR007W SAP30P38429 201 aa8.72□□□□□ -1.01
TRP1YDR007W KXD1P53158 218 aa8.72□□□□□ -1.01
TRP1YDR007W YPR084WQ06821 456 aa8.72□□□□□ -1.01
TRP1YDR007W AIM44Q99299 758 aa8.72□□□□□ -1.01
TRP1YDR007W PDC1P06169 563 aaKnown RBP8.71□□□□□ -1.02
TRP1YDR007W HAP4P14064 554 aa8.71□□□□□ -1.02
TRP1YDR007W RRN6P32786 894 aa8.71□□□□□ -1.02
TRP1YDR007W SOH1P38633 127 aa8.71□□□□□ -1.02
TRP1YDR007W BNI4P53858 892 aa8.71□□□□□ -1.02
TRP1YDR007W KAR5Q04746 504 aa8.71□□□□□ -1.02
TRP1YDR007W UTP13Q05946 817 aaKnown RBP8.71□□□□□ -1.02
TRP1YDR007W PAT1P25644 796 aaKnown RBP8.7□□□□□ -1.02
TRP1YDR007W PAC1P39946 494 aaKnown RBP8.7□□□□□ -1.02
TRP1YDR007W CWC15Q03772 175 aaKnown RBP8.7□□□□□ -1.02
TRP1YDR007W PUF6Q04373 656 aaKnown RBP8.7□□□□□ -1.02
TRP1YDR007W PRT1P06103 763 aaKnown RBP8.69□□□□□ -1.02
TRP1YDR007W SEC20P28791 383 aa8.69□□□□□ -1.02
TRP1YDR007W ERP5P38819 212 aa8.69□□□□□ -1.02
TRP1YDR007W IPL1P38991 367 aa8.69□□□□□ -1.02
TRP1YDR007W RRN7P40992 514 aa8.68□□□□□ -1.02
TRP1YDR007W ELP4Q02884 456 aaKnown RBP8.68□□□□□ -1.02
TRP1YDR007W SPT23P35210 1082 aa8.67□□□□□ -1.02
TRP1YDR007W TPS3P38426 1054 aaKnown RBP8.67□□□□□ -1.02
TRP1YDR007W APL6P46682 809 aa8.67□□□□□ -1.02
TRP1YDR007W ACS2P52910 683 aaKnown RBP8.67□□□□□ -1.02
TRP1YDR007W ASF1P32447 279 aa8.66□□□□□ -1.02
TRP1YDR007W PTC2P39966 464 aaKnown RBP8.66□□□□□ -1.02
TRP1YDR007W HXT10P43581 546 aa8.66□□□□□ -1.02
TRP1YDR007W YJL171CP46992 396 aa8.66□□□□□ -1.02
TRP1YDR007W YDR344CQ05510 147 aa8.66□□□□□ -1.02
TRP1YDR007W ROM1P53046 1155 aa8.65□□□□□ -1.02
TRP1YDR007W MSC6Q08818 692 aaKnown RBP8.65□□□□□ -1.02
TRP1YDR007W TSC13Q99190 310 aa8.65□□□□□ -1.02
TRP1YDR007W MET10P39692 1035 aa8.64□□□□□ -1.03
TRP1YDR007W PNP1Q05788 311 aa8.64□□□□□ -1.03
TRP1YDR007W GAS4Q08271 471 aa8.64□□□□□ -1.03
TRP1YDR007W PDI1P17967 522 aaKnown RBP8.63□□□□□ -1.03
TRP1YDR007W VAC17P25591 423 aa8.63□□□□□ -1.03
TRP1YDR007W SPT16P32558 1035 aaKnown RBP8.63□□□□□ -1.03
TRP1YDR007W PAM1P37304 830 aaKnown RBP8.63□□□□□ -1.03
TRP1YDR007W PUN1Q06991 263 aa8.63□□□□□ -1.03
TRP1YDR007W TRL1P09880 827 aaKnown RBP8.62□□□□□ -1.03
TRP1YDR007W GRS1P38088 690 aaKnown RBP8.62□□□□□ -1.03
TRP1YDR007W ITT1Q04638 464 aa8.62□□□□□ -1.03
TRP1YDR007W YPR015CQ12531 247 aa8.62□□□□□ -1.03
TRP1YDR007W SRS2P12954 1174 aa8.61□□□□□ -1.03
TRP1YDR007W YHL050CP38721 697 aa8.61□□□□□ -1.03
TRP1YDR007W YHR219WP38900 624 aa8.61□□□□□ -1.03
TRP1YDR007W YFL034WP43564 1073 aa8.61□□□□□ -1.03
TRP1YDR007W VAN1P23642 535 aa8.6□□□□□ -1.03
TRP1YDR007W TPD3P31383 635 aa8.6□□□□□ -1.03
TRP1YDR007W IXR1P33417 597 aa8.6□□□□□ -1.03
TRP1YDR007W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
TRP1YDR007W FUR4P05316 633 aaKnown RBP8.59□□□□□ -1.03
TRP1YDR007W RRD1P40454 393 aaKnown RBP8.59□□□□□ -1.03
TRP1YDR007W MDJ2P42834 146 aa8.59□□□□□ -1.03
TRP1YDR007W ISR1Q06098 443 aaKnown RBP8.59□□□□□ -1.03
TRP1YDR007W MIP1P15801 1254 aa8.58□□□□□ -1.04
TRP1YDR007W ATG1P53104 897 aa8.58□□□□□ -1.04
TRP1YDR007W ORC1P54784 914 aaPredicted RBP8.58□□□□□ -1.04
TRP1YDR007W YML082WQ04533 649 aaKnown RBP8.58□□□□□ -1.04
TRP1YDR007W BMT6Q12291 365 aa8.57□□□□□ -1.04
TRP1YDR007W TRS33Q99394 268 aa8.57□□□□□ -1.04
TRP1YDR007W HAL5P38970 855 aaKnown RBP8.56□□□□□ -1.04
TRP1YDR007W BOL3P39724 118 aa8.56□□□□□ -1.04
TRP1YDR007W AIM9P40053 627 aaKnown RBP8.56□□□□□ -1.04
TRP1YDR007W GLO3P38682 493 aaKnown RBP8.54□□□□□ -1.04
TRP1YDR007W PPX1P38698 397 aa8.54□□□□□ -1.04
TRP1YDR007W THI12P42883 340 aa8.54□□□□□ -1.04
TRP1YDR007W THI5P43534 340 aa8.54□□□□□ -1.04
TRP1YDR007W POL32P47110 350 aa8.54□□□□□ -1.04
TRP1YDR007W THI11P47183 340 aa8.54□□□□□ -1.04
TRP1YDR007W ALD2P47771 506 aa8.54□□□□□ -1.04
TRP1YDR007W HDA3Q06623 655 aa8.54□□□□□ -1.04
TRP1YDR007W ATG20Q07528 640 aa8.54□□□□□ -1.04
TRP1YDR007W THI13Q07748 340 aa8.54□□□□□ -1.04
TRP1YDR007W MOD5P07884 428 aa8.53□□□□□ -1.04
TRP1YDR007W NTH2P35172 780 aa8.53□□□□□ -1.04
TRP1YDR007W QDR1P40475 563 aa8.52□□□□□ -1.05
TRP1YDR007W ALD4P46367 519 aaKnown RBP8.52□□□□□ -1.05
TRP1YDR007W ACF4P47129 309 aa8.52□□□□□ -1.05
TRP1YDR007W KIP2P28743 706 aa8.51□□□□□ -1.05
TRP1YDR007W CWH41P53008 833 aa8.51□□□□□ -1.05
TRP1YDR007W SAS4Q04003 481 aa8.51□□□□□ -1.05
TRP1YDR007W GYP1Q08484 637 aa8.51□□□□□ -1.05
TRP1YDR007W RRP15Q06511 250 aaPredicted RBP8.5□□□□□ -1.05
TRP1YDR007W PRE3P38624 215 aa8.49□□□□□ -1.05
TRP1YDR007W NUT2Q06213 157 aa8.49□□□□□ -1.05
TRP1YDR007W WHI5Q12416 295 aa8.49□□□□□ -1.05
TRP1YDR007W ATE1P16639 503 aa8.48□□□□□ -1.05
TRP1YDR007W UBP1P25037 809 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms