RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C VAC17P25591 423 aa8.17□□□□□ -1.1
RRI1YDL216C YPL062WQ02781 134 aa8.17□□□□□ -1.1
RRI1YDL216C TAF7Q05021 590 aa8.17□□□□□ -1.1
RRI1YDL216C GBP2P25555 427 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
RRI1YDL216C MRT4P33201 236 aaKnown RBP8.16□□□□□ -1.1
RRI1YDL216C YDR444WQ04093 687 aa8.16□□□□□ -1.1
RRI1YDL216C PKC1P24583 1151 aa8.15□□□□□ -1.1
RRI1YDL216C CSE4P36012 229 aa8.15□□□□□ -1.1
RRI1YDL216C YBL036CP38197 257 aa8.15□□□□□ -1.1
RRI1YDL216C UGA3P26370 528 aa8.14□□□□□ -1.11
RRI1YDL216C LCB5Q06147 687 aaKnown RBP8.13□□□□□ -1.11
RRI1YDL216C MAK16P10962 306 aaPredicted RBP8.09□□□□□ -1.11
RRI1YDL216C PTK2P47116 818 aaKnown RBP8.09□□□□□ -1.11
RRI1YDL216C ITT1Q04638 464 aa8.09□□□□□ -1.11
RRI1YDL216C RGA2Q06407 1009 aa8.09□□□□□ -1.11
RRI1YDL216C FIG4P42837 879 aa8.08□□□□□ -1.12
RRI1YDL216C SPT5P27692 1063 aaKnown RBP8.07□□□□□ -1.12
RRI1YDL216C RTT106P40161 455 aa8.07□□□□□ -1.12
RRI1YDL216C YJL007CP47080 104 aa8.07□□□□□ -1.12
RRI1YDL216C SRF1Q12516 437 aa8.07□□□□□ -1.12
RRI1YDL216C APP1P53933 587 aa8.05□□□□□ -1.12
RRI1YDL216C YBL086CP38177 466 aa8.04□□□□□ -1.12
RRI1YDL216C EMW1P42842 904 aaKnown RBP8.04□□□□□ -1.12
RRI1YDL216C NAF1P53919 492 aaKnown RBP8.04□□□□□ -1.12
RRI1YDL216C BIM1P40013 344 aa8.03□□□□□ -1.12
RRI1YDL216C BIO2P32451 375 aa8.03□□□□□ -1.12
RRI1YDL216C NUP85P46673 744 aa8.03□□□□□ -1.12
RRI1YDL216C YDL176WQ12027 708 aa8.03□□□□□ -1.12
RRI1YDL216C RPL34BP40525 121 aaKnown RBP8.02□□□□□ -1.13
RRI1YDL216C OPT2Q06593 877 aa8.02□□□□□ -1.13
RRI1YDL216C RLF2Q12495 606 aa8.02□□□□□ -1.13
RRI1YDL216C TEC1P18412 486 aa8.01□□□□□ -1.13
RRI1YDL216C YLR346CQ06139 101 aa8.01□□□□□ -1.13
RRI1YDL216C ATG32P40458 529 aa7.99□□□□□ -1.13
RRI1YDL216C YPR084WQ06821 456 aa7.99□□□□□ -1.13
RRI1YDL216C ARG82P07250 355 aa7.98□□□□□ -1.13
RRI1YDL216C YNL108CP53929 270 aa7.98□□□□□ -1.13
RRI1YDL216C TIF1P10081 395 aaKnown RBP7.97□□□□□ -1.13
RRI1YDL216C SUP45P12385 437 aaKnown RBP7.97□□□□□ -1.13
RRI1YDL216C AAD14P42884 376 aa7.97□□□□□ -1.13
RRI1YDL216C YDJ1P25491 409 aaKnown RBP7.96□□□□□ -1.14
RRI1YDL216C YPP1P46951 817 aa7.96□□□□□ -1.14
RRI1YDL216C MKS1P34072 584 aa7.95□□□□□ -1.14
RRI1YDL216C GLY1P37303 387 aaKnown RBP7.95□□□□□ -1.14
RRI1YDL216C ACO2P39533 789 aa7.95□□□□□ -1.14
RRI1YDL216C GUT2P32191 649 aa7.94□□□□□ -1.14
RRI1YDL216C LSC2P53312 427 aa7.93□□□□□ -1.14
RRI1YDL216C CAF120P53836 1060 aa7.93□□□□□ -1.14
RRI1YDL216C DFG5Q05031 458 aa7.93□□□□□ -1.14
RRI1YDL216C MCM16Q12262 181 aa7.93□□□□□ -1.14
RRI1YDL216C MIP1P15801 1254 aa7.92□□□□□ -1.14
RRI1YDL216C RTG2P32608 588 aaKnown RBP7.92□□□□□ -1.14
RRI1YDL216C ENO2P00925 437 aaKnown RBP7.91□□□□□ -1.14
RRI1YDL216C MRX12P47084 519 aa7.91□□□□□ -1.14
RRI1YDL216C DLD1P32891 587 aa7.9□□□□□ -1.14
RRI1YDL216C SCW11P53189 542 aa7.9□□□□□ -1.14
RRI1YDL216C STE20Q03497 939 aaKnown RBP7.9□□□□□ -1.14
RRI1YDL216C FRA1Q07825 749 aa7.9□□□□□ -1.14
RRI1YDL216C TY1A-BLQ12266 440 aa7.9□□□□□ -1.14
RRI1YDL216C FBP26P32604 452 aa7.89□□□□□ -1.15
RRI1YDL216C YJR098CP47139 656 aa7.89□□□□□ -1.15
RRI1YDL216C RIM21P48565 533 aa7.89□□□□□ -1.15
RRI1YDL216C BDS1Q08347 646 aa7.88□□□□□ -1.15
RRI1YDL216C EMP47P43555 445 aa7.87□□□□□ -1.15
RRI1YDL216C UBP2Q01476 1272 aa7.87□□□□□ -1.15
RRI1YDL216C YPR204WQ08995 1032 aa7.87□□□□□ -1.15
RRI1YDL216C STE6P12866 1290 aa7.86□□□□□ -1.15
RRI1YDL216C ATG3P40344 310 aa7.86□□□□□ -1.15
RRI1YDL216C TCB1Q12466 1186 aa7.86□□□□□ -1.15
RRI1YDL216C SIS2P36024 562 aa7.85□□□□□ -1.15
RRI1YDL216C YIR007WP40566 764 aa7.85□□□□□ -1.15
RRI1YDL216C ATG20Q07528 640 aa7.85□□□□□ -1.15
RRI1YDL216C ISF1P32488 338 aa7.84□□□□□ -1.15
RRI1YDL216C MRX10Q05648 414 aa7.84□□□□□ -1.15
RRI1YDL216C ENO1P00924 437 aaKnown RBP7.83□□□□□ -1.16
RRI1YDL216C ISU1Q03020 165 aa7.83□□□□□ -1.16
RRI1YDL216C OSH7P38755 437 aa7.8□□□□□ -1.16
RRI1YDL216C APL6P46682 809 aa7.8□□□□□ -1.16
RRI1YDL216C UTP13Q05946 817 aaKnown RBP7.8□□□□□ -1.16
RRI1YDL216C RDS2P19541 446 aaKnown RBP7.78□□□□□ -1.16
RRI1YDL216C TTI1P36097 1038 aa7.78□□□□□ -1.16
RRI1YDL216C SSA4P22202 642 aaKnown RBP7.77□□□□□ -1.17
RRI1YDL216C ROG3P43602 733 aa7.76□□□□□ -1.17
RRI1YDL216C YGR035CP53222 116 aa7.76□□□□□ -1.17
RRI1YDL216C HPF1Q05164 967 aa7.76□□□□□ -1.17
RRI1YDL216C ISR1Q06098 443 aaKnown RBP7.76□□□□□ -1.17
RRI1YDL216C PEP12P32854 288 aa7.75□□□□□ -1.17
RRI1YDL216C TY1A-MR1Q04215 440 aa7.75□□□□□ -1.17
RRI1YDL216C RPP2BP02400 110 aaKnown RBP7.74□□□□□ -1.17
RRI1YDL216C SOH1P38633 127 aa7.74□□□□□ -1.17
RRI1YDL216C CPS1P27614 576 aa7.73□□□□□ -1.17
RRI1YDL216C DLD3P39976 496 aaKnown RBP7.73□□□□□ -1.17
RRI1YDL216C WTM2Q12206 467 aa7.73□□□□□ -1.17
RRI1YDL216C CDC19P00549 500 aaKnown RBP7.72□□□□□ -1.17
RRI1YDL216C TRK2P28584 889 aa7.72□□□□□ -1.17
RRI1YDL216C VTC4P47075 721 aa7.72□□□□□ -1.17
RRI1YDL216C CCP1P00431 361 aa7.71□□□□□ -1.18
RRI1YDL216C SPT2P06843 333 aaPredicted RBP7.71□□□□□ -1.18
RRI1YDL216C HAL5P38970 855 aaKnown RBP7.71□□□□□ -1.18
RRI1YDL216C DAT1P13483 248 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms