RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W SPT5P27692 1063 aaKnown RBP5.87□□□□□ -1.47
TSR1YDL060W FIG4P42837 879 aa5.87□□□□□ -1.47
TSR1YDL060W NAF1P53919 492 aaKnown RBP5.87□□□□□ -1.47
TSR1YDL060W AFT1P22149 690 aa5.86□□□□□ -1.47
TSR1YDL060W UGA3P26370 528 aa5.86□□□□□ -1.47
TSR1YDL060W GUT2P32191 649 aa5.86□□□□□ -1.47
TSR1YDL060W YJL007CP47080 104 aa5.86□□□□□ -1.47
TSR1YDL060W STE20Q03497 939 aaKnown RBP5.85□□□□□ -1.47
TSR1YDL060W SRF1Q12516 437 aa5.84□□□□□ -1.47
TSR1YDL060W RPL34BP40525 121 aaKnown RBP5.84□□□□□ -1.48
TSR1YDL060W APP1P53933 587 aa5.84□□□□□ -1.48
TSR1YDL060W RTT106P40161 455 aa5.83□□□□□ -1.48
TSR1YDL060W MRT4P33201 236 aaKnown RBP5.82□□□□□ -1.48
TSR1YDL060W ITT1Q04638 464 aa5.82□□□□□ -1.48
TSR1YDL060W YNL108CP53929 270 aa5.81□□□□□ -1.48
TSR1YDL060W YDJ1P25491 409 aaKnown RBP5.81□□□□□ -1.48
TSR1YDL060W YPP1P46951 817 aa5.81□□□□□ -1.48
TSR1YDL060W MSB3P48566 633 aaPredicted RBP5.81□□□□□ -1.48
TSR1YDL060W EMW1P42842 904 aaKnown RBP5.8□□□□□ -1.48
TSR1YDL060W YJR115WP47152 169 aa5.8□□□□□ -1.48
TSR1YDL060W BIO2P32451 375 aa5.79□□□□□ -1.48
TSR1YDL060W EMP47P43555 445 aa5.79□□□□□ -1.48
TSR1YDL060W MRX12P47084 519 aa5.79□□□□□ -1.48
TSR1YDL060W MCM16Q12262 181 aa5.79□□□□□ -1.48
TSR1YDL060W MKS1P34072 584 aa5.79□□□□□ -1.48
TSR1YDL060W BIM1P40013 344 aa5.79□□□□□ -1.48
TSR1YDL060W GBP2P25555 427 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
TSR1YDL060W FRA1Q07825 749 aa5.78□□□□□ -1.48
TSR1YDL060W RLF2Q12495 606 aa5.78□□□□□ -1.48
TSR1YDL060W ISF1P32488 338 aa5.78□□□□□ -1.48
TSR1YDL060W ATG3P40344 310 aa5.78□□□□□ -1.48
TSR1YDL060W YPR084WQ06821 456 aa5.77□□□□□ -1.49
TSR1YDL060W ATG20Q07528 640 aa5.77□□□□□ -1.49
TSR1YDL060W ARG82P07250 355 aa5.76□□□□□ -1.49
TSR1YDL060W SUP45P12385 437 aaKnown RBP5.76□□□□□ -1.49
TSR1YDL060W YBL086CP38177 466 aa5.76□□□□□ -1.49
TSR1YDL060W PTK2P47116 818 aaKnown RBP5.76□□□□□ -1.49
TSR1YDL060W ENV9Q08651 330 aa5.76□□□□□ -1.49
TSR1YDL060W YLR346CQ06139 101 aa5.75□□□□□ -1.49
TSR1YDL060W BDS1Q08347 646 aa5.75□□□□□ -1.49
TSR1YDL060W RPP2BP02400 110 aaKnown RBP5.75□□□□□ -1.49
TSR1YDL060W GAR1P28007 205 aaKnown RBP5.75□□□□□ -1.49
TSR1YDL060W ATG32P40458 529 aa5.75□□□□□ -1.49
TSR1YDL060W ENO2P00925 437 aaKnown RBP5.74□□□□□ -1.49
TSR1YDL060W DFG5Q05031 458 aa5.74□□□□□ -1.49
TSR1YDL060W RTG2P32608 588 aaKnown RBP5.74□□□□□ -1.49
TSR1YDL060W TIF1P10081 395 aaKnown RBP5.73□□□□□ -1.49
TSR1YDL060W FBP26P32604 452 aa5.73□□□□□ -1.49
TSR1YDL060W MET22P32179 357 aa5.72□□□□□ -1.49
TSR1YDL060W NUP85P46673 744 aa5.72□□□□□ -1.49
TSR1YDL060W YDR444WQ04093 687 aa5.72□□□□□ -1.49
TSR1YDL060W ISR1Q06098 443 aaKnown RBP5.71□□□□□ -1.5
TSR1YDL060W ISU1Q03020 165 aa5.71□□□□□ -1.5
TSR1YDL060W YPR204WQ08995 1032 aa5.71□□□□□ -1.5
TSR1YDL060W AAD14P42884 376 aa5.7□□□□□ -1.5
TSR1YDL060W DAT1P13483 248 aaKnown RBP5.7□□□□□ -1.5
TSR1YDL060W SOH1P38633 127 aa5.7□□□□□ -1.5
TSR1YDL060W DLD3P39976 496 aaKnown RBP5.7□□□□□ -1.5
TSR1YDL060W LSC2P53312 427 aa5.7□□□□□ -1.5
TSR1YDL060W RIM21P48565 533 aa5.69□□□□□ -1.5
TSR1YDL060W UTP13Q05946 817 aaKnown RBP5.69□□□□□ -1.5
TSR1YDL060W STE6P12866 1290 aa5.68□□□□□ -1.5
TSR1YDL060W TBS1P38114 1094 aa5.68□□□□□ -1.5
TSR1YDL060W LCB5Q06147 687 aaKnown RBP5.67□□□□□ -1.5
TSR1YDL060W ENO1P00924 437 aaKnown RBP5.67□□□□□ -1.5
TSR1YDL060W UTR2P32623 467 aa5.67□□□□□ -1.5
TSR1YDL060W MIP1P15801 1254 aa5.66□□□□□ -1.5
TSR1YDL060W DLD1P32891 587 aa5.66□□□□□ -1.5
TSR1YDL060W UBP2Q01476 1272 aa5.66□□□□□ -1.5
TSR1YDL060W OPT2Q06593 877 aa5.66□□□□□ -1.5
TSR1YDL060W APL6P46682 809 aa5.65□□□□□ -1.5
TSR1YDL060W SCW11P53189 542 aa5.64□□□□□ -1.51
TSR1YDL060W MRX10Q05648 414 aa5.64□□□□□ -1.51
TSR1YDL060W WTM2Q12206 467 aa5.64□□□□□ -1.51
TSR1YDL060W SIS2P36024 562 aa5.63□□□□□ -1.51
TSR1YDL060W YFL034WP43564 1073 aa5.63□□□□□ -1.51
TSR1YDL060W YJR098CP47139 656 aa5.63□□□□□ -1.51
TSR1YDL060W SPT2P06843 333 aaPredicted RBP5.62□□□□□ -1.51
TSR1YDL060W GLY1P37303 387 aaKnown RBP5.62□□□□□ -1.51
TSR1YDL060W HAL5P38970 855 aaKnown RBP5.62□□□□□ -1.51
TSR1YDL060W HDA3Q06623 655 aa5.62□□□□□ -1.51
TSR1YDL060W TCB1Q12466 1186 aa5.62□□□□□ -1.51
TSR1YDL060W KTR7P40504 517 aa5.62□□□□□ -1.51
TSR1YDL060W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
TSR1YDL060W RDS2P19541 446 aaKnown RBP5.6□□□□□ -1.51
TSR1YDL060W ALA1P40825 983 aaKnown RBP5.59□□□□□ -1.51
TSR1YDL060W AIM9P40053 627 aaKnown RBP5.58□□□□□ -1.52
TSR1YDL060W UTP7P40055 554 aaKnown RBP5.58□□□□□ -1.52
TSR1YDL060W PDI1P17967 522 aaKnown RBP5.57□□□□□ -1.52
TSR1YDL060W CAF120P53836 1060 aa5.57□□□□□ -1.52
TSR1YDL060W TY1A-BLQ12266 440 aa5.57□□□□□ -1.52
TSR1YDL060W SLX8P40072 274 aa5.56□□□□□ -1.52
TSR1YDL060W TSC13Q99190 310 aa5.56□□□□□ -1.52
TSR1YDL060W PEP12P32854 288 aa5.56□□□□□ -1.52
TSR1YDL060W AHP1P38013 176 aaKnown RBP5.56□□□□□ -1.52
TSR1YDL060W NTH2P35172 780 aa5.55□□□□□ -1.52
TSR1YDL060W TTI1P36097 1038 aa5.55□□□□□ -1.52
TSR1YDL060W OSH7P38755 437 aa5.55□□□□□ -1.52
TSR1YDL060W HAP4P14064 554 aa5.55□□□□□ -1.52
TSR1YDL060W SUM1P46676 1062 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms