RNA–Protein interactions for RNA: YCL037C

SRO9, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SRO9, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRO9	YCL037C	ITT1	Q04638	464 aa		7.66	□□□□□ -1.18
SRO9	YCL037C	SPT5	P27692	1063 aa	Known RBP	7.65	□□□□□ -1.18
SRO9	YCL037C	YDJ1	P25491	409 aa	Known RBP	7.64	□□□□□ -1.19
SRO9	YCL037C	HST3	P53687	447 aa		7.64	□□□□□ -1.19
SRO9	YCL037C	YNL108C	P53929	270 aa		7.64	□□□□□ -1.19
SRO9	YCL037C	GUT2	P32191	649 aa		7.62	□□□□□ -1.19
SRO9	YCL037C	ASH1	P34233	588 aa		7.62	□□□□□ -1.19
SRO9	YCL037C	APP1	P53933	587 aa		7.62	□□□□□ -1.19
SRO9	YCL037C	BIM1	P40013	344 aa		7.61	□□□□□ -1.19
SRO9	YCL037C	YPR084W	Q06821	456 aa		7.61	□□□□□ -1.19
SRO9	YCL037C	AFT1	P22149	690 aa		7.6	□□□□□ -1.19
SRO9	YCL037C	ISF1	P32488	338 aa		7.6	□□□□□ -1.19
SRO9	YCL037C	ATG32	P40458	529 aa		7.59	□□□□□ -1.19
SRO9	YCL037C	BRE2	P43132	505 aa		7.59	□□□□□ -1.19
SRO9	YCL037C	STE20	Q03497	939 aa	Known RBP	7.59	□□□□□ -1.19
SRO9	YCL037C	MCM16	Q12262	181 aa		7.59	□□□□□ -1.19
SRO9	YCL037C	RPL34B	P40525	121 aa	Known RBP	7.58	□□□□□ -1.2
SRO9	YCL037C	EMP47	P43555	445 aa		7.58	□□□□□ -1.2
SRO9	YCL037C	UGA3	P26370	528 aa		7.57	□□□□□ -1.2
SRO9	YCL037C	MRT4	P33201	236 aa	Known RBP	7.57	□□□□□ -1.2
SRO9	YCL037C	ENO2	P00925	437 aa	Known RBP	7.56	□□□□□ -1.2
SRO9	YCL037C	SUP45	P12385	437 aa	Known RBP	7.56	□□□□□ -1.2
SRO9	YCL037C	GCR2	Q01722	534 aa		7.56	□□□□□ -1.2
SRO9	YCL037C	FRA1	Q07825	749 aa		7.56	□□□□□ -1.2
SRO9	YCL037C	TIF1	P10081	395 aa	Known RBP	7.55	□□□□□ -1.2
SRO9	YCL037C	EMW1	P42842	904 aa	Known RBP	7.55	□□□□□ -1.2
SRO9	YCL037C	YPP1	P46951	817 aa		7.54	□□□□□ -1.2
SRO9	YCL037C	MSB3	P48566	633 aa	Predicted RBP	7.54	□□□□□ -1.2
SRO9	YCL037C	RTG2	P32608	588 aa	Known RBP	7.52	□□□□□ -1.2
SRO9	YCL037C	MKS1	P34072	584 aa		7.52	□□□□□ -1.2
SRO9	YCL037C	YBL086C	P38177	466 aa		7.52	□□□□□ -1.21
SRO9	YCL037C	MRX12	P47084	519 aa		7.52	□□□□□ -1.21
SRO9	YCL037C	YJR115W	P47152	169 aa		7.52	□□□□□ -1.21
SRO9	YCL037C	RIM21	P48565	533 aa		7.51	□□□□□ -1.21
SRO9	YCL037C	ATG20	Q07528	640 aa		7.51	□□□□□ -1.21
SRO9	YCL037C	SRF1	Q12516	437 aa		7.51	□□□□□ -1.21
SRO9	YCL037C	YPR204W	Q08995	1032 aa		7.5	□□□□□ -1.21
SRO9	YCL037C	FBP26	P32604	452 aa		7.48	□□□□□ -1.21
SRO9	YCL037C	RTT106	P40161	455 aa		7.48	□□□□□ -1.21
SRO9	YCL037C	PTK2	P47116	818 aa	Known RBP	7.48	□□□□□ -1.21
SRO9	YCL037C	DFG5	Q05031	458 aa		7.48	□□□□□ -1.21
SRO9	YCL037C	ENO1	P00924	437 aa	Known RBP	7.47	□□□□□ -1.21
SRO9	YCL037C	ISR1	Q06098	443 aa	Known RBP	7.47	□□□□□ -1.21
SRO9	YCL037C	ENV9	Q08651	330 aa		7.47	□□□□□ -1.21
SRO9	YCL037C	SOH1	P38633	127 aa		7.46	□□□□□ -1.22
SRO9	YCL037C	ATG3	P40344	310 aa		7.46	□□□□□ -1.22
SRO9	YCL037C	APL6	P46682	809 aa		7.45	□□□□□ -1.22
SRO9	YCL037C	BDS1	Q08347	646 aa		7.45	□□□□□ -1.22
SRO9	YCL037C	ARG82	P07250	355 aa		7.43	□□□□□ -1.22
SRO9	YCL037C	ISU1	Q03020	165 aa		7.43	□□□□□ -1.22
SRO9	YCL037C	MRX10	Q05648	414 aa		7.43	□□□□□ -1.22
SRO9	YCL037C	RDS2	P19541	446 aa	Known RBP	7.42	□□□□□ -1.22
SRO9	YCL037C	AAD14	P42884	376 aa		7.42	□□□□□ -1.22
SRO9	YCL037C	HAL5	P38970	855 aa	Known RBP	7.41	□□□□□ -1.22
SRO9	YCL037C	STE6	P12866	1290 aa		7.4	□□□□□ -1.22
SRO9	YCL037C	UTP13	Q05946	817 aa	Known RBP	7.4	□□□□□ -1.22
SRO9	YCL037C	RLF2	Q12495	606 aa		7.4	□□□□□ -1.22
SRO9	YCL037C	MET22	P32179	357 aa		7.39	□□□□□ -1.23
SRO9	YCL037C	RPP2B	P02400	110 aa	Known RBP	7.38	□□□□□ -1.23
SRO9	YCL037C	GAR1	P28007	205 aa	Known RBP	7.38	□□□□□ -1.23
SRO9	YCL037C	UTR2	P32623	467 aa		7.38	□□□□□ -1.23
SRO9	YCL037C	DLD1	P32891	587 aa		7.38	□□□□□ -1.23
SRO9	YCL037C	NUP85	P46673	744 aa		7.38	□□□□□ -1.23
SRO9	YCL037C	YDR444W	Q04093	687 aa		7.38	□□□□□ -1.23
SRO9	YCL037C	MIP1	P15801	1254 aa		7.37	□□□□□ -1.23
SRO9	YCL037C	DLD3	P39976	496 aa	Known RBP	7.37	□□□□□ -1.23
SRO9	YCL037C	DAT1	P13483	248 aa	Known RBP	7.36	□□□□□ -1.23
SRO9	YCL037C	KTR7	P40504	517 aa		7.36	□□□□□ -1.23
SRO9	YCL037C	LSC2	P53312	427 aa		7.35	□□□□□ -1.23
SRO9	YCL037C	YLR346C	Q06139	101 aa		7.35	□□□□□ -1.23
SRO9	YCL037C	LCB5	Q06147	687 aa	Known RBP	7.35	□□□□□ -1.23
SRO9	YCL037C	HDA3	Q06623	655 aa		7.35	□□□□□ -1.23
SRO9	YCL037C	OPT2	Q06593	877 aa		7.34	□□□□□ -1.23
SRO9	YCL037C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	not detected
SRO9	YCL037C	SPT2	P06843	333 aa	Predicted RBP	7.33	□□□□□ -1.24
SRO9	YCL037C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.33	□□□□□ -1.24	not detected
SRO9	YCL037C	SIS2	P36024	562 aa		7.33	□□□□□ -1.24
SRO9	YCL037C	TBS1	P38114	1094 aa		7.33	□□□□□ -1.24
SRO9	YCL037C	WTM2	Q12206	467 aa		7.33	□□□□□ -1.24
SRO9	YCL037C	PEP12	P32854	288 aa		7.32	□□□□□ -1.24
SRO9	YCL037C	YJR098C	P47139	656 aa		7.32	□□□□□ -1.24
SRO9	YCL037C	CPS1	P27614	576 aa		7.31	□□□□□ -1.24
SRO9	YCL037C	TTI1	P36097	1038 aa		7.31	□□□□□ -1.24
SRO9	YCL037C	AIM9	P40053	627 aa	Known RBP	7.3	□□□□□ -1.24
SRO9	YCL037C	UTP7	P40055	554 aa	Known RBP	7.29	□□□□□ -1.24
SRO9	YCL037C	TCB1	Q12466	1186 aa		7.29	□□□□□ -1.24
SRO9	YCL037C	PDI1	P17967	522 aa	Known RBP	7.28	□□□□□ -1.24
SRO9	YCL037C	SLX8	P40072	274 aa		7.28	□□□□□ -1.24
SRO9	YCL037C	UBP2	Q01476	1272 aa		7.28	□□□□□ -1.24
SRO9	YCL037C	YFL034W	P43564	1073 aa		7.27	□□□□□ -1.24
SRO9	YCL037C	SCW11	P53189	542 aa		7.27	□□□□□ -1.24
SRO9	YCL037C	TGL4	P36165	910 aa		7.27	□□□□□ -1.25
SRO9	YCL037C	GLY1	P37303	387 aa	Known RBP	7.27	□□□□□ -1.25
SRO9	YCL037C	TSC13	Q99190	310 aa		7.27	□□□□□ -1.25
SRO9	YCL037C	SWI5	P08153	709 aa		7.25	□□□□□ -1.25
SRO9	YCL037C	PHO87	P25360	923 aa		7.25	□□□□□ -1.25
SRO9	YCL037C	TY1A-BL	Q12266	440 aa		7.25	□□□□□ -1.25
SRO9	YCL037C	RPS6A	P0CX37	236 aa	Known RBP	7.24	□□□□□ -1.25
SRO9	YCL037C	RPS6B	P0CX38	236 aa	Predicted RBP	7.24	□□□□□ -1.25
SRO9	YCL037C	SSA4	P22202	642 aa	Known RBP	7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms