RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W MAK21Q12176 1025 aaKnown RBP8.51□□□□□ -1.05
LDB16YCL005W PTC4P38089 393 aa8.5□□□□□ -1.05
LDB16YCL005W YEL023CP39992 682 aa8.49□□□□□ -1.05
LDB16YCL005W YDL129WQ07555 291 aa8.49□□□□□ -1.05
LDB16YCL005W MAM3Q12296 706 aa8.48□□□□□ -1.05
LDB16YCL005W MLP1Q02455 1875 aaKnown RBP8.48□□□□□ -1.05
LDB16YCL005W SPT7P35177 1332 aa8.48□□□□□ -1.05
LDB16YCL005W KRE5P22023 1365 aa8.48□□□□□ -1.05
LDB16YCL005W RIA1P53893 1110 aa8.47□□□□□ -1.05
LDB16YCL005W PDS5Q04264 1277 aa8.47□□□□□ -1.05
LDB16YCL005W RGA2Q06407 1009 aa8.47□□□□□ -1.05
LDB16YCL005W TY1B-NL2Q99337 1749 aaKnown RBP8.46□□□□□ -1.05
LDB16YCL005W USO1P25386 1790 aa8.46□□□□□ -1.05
LDB16YCL005W COX6P00427 148 aa8.46□□□□□ -1.06
LDB16YCL005W ENP1P38333 483 aaKnown RBP8.45□□□□□ -1.06
LDB16YCL005W CFT1Q06632 1357 aaKnown RBP8.45□□□□□ -1.06
LDB16YCL005W CHZ1P40019 153 aaPredicted RBP8.44□□□□□ -1.06
LDB16YCL005W CHL1P22516 861 aaPredicted RBP8.43□□□□□ -1.06
LDB16YCL005W YGR273CP53329 174 aa8.43□□□□□ -1.06
LDB16YCL005W UBP14P38237 781 aaKnown RBP8.41□□□□□ -1.06
LDB16YCL005W VHR2P40041 505 aa8.41□□□□□ -1.06
LDB16YCL005W YNR021WP53723 404 aaKnown RBP8.4□□□□□ -1.06
LDB16YCL005W PRE3P38624 215 aa8.39□□□□□ -1.07
LDB16YCL005W KIC1P38692 1080 aa8.39□□□□□ -1.07
LDB16YCL005W YNR029CP53729 429 aaKnown RBP8.39□□□□□ -1.07
LDB16YCL005W BCK2P33306 851 aa8.38□□□□□ -1.07
LDB16YCL005W IES2P40154 320 aa8.38□□□□□ -1.07
LDB16YCL005W YMR196WQ04336 1088 aa8.38□□□□□ -1.07
LDB16YCL005W YLR326WQ06170 240 aaKnown RBP8.38□□□□□ -1.07
LDB16YCL005W RCM1P53972 490 aa8.37□□□□□ -1.07
LDB16YCL005W PSK1P31374 1356 aa8.36□□□□□ -1.07
LDB16YCL005W SOL3P38858 249 aa8.36□□□□□ -1.07
LDB16YCL005W YDR090CQ03193 310 aa8.36□□□□□ -1.07
LDB16YCL005W KEX1P09620 729 aa8.34□□□□□ -1.07
LDB16YCL005W RAD54P32863 898 aa8.34□□□□□ -1.07
LDB16YCL005W NUP42P49686 430 aaKnown RBP8.34□□□□□ -1.07
LDB16YCL005W PPH3P32345 308 aa8.33□□□□□ -1.08
LDB16YCL005W AI4P03878 556 aa8.32□□□□□ -1.08
LDB16YCL005W MPH3P0CE00 602 aa8.32□□□□□ -1.08
LDB16YCL005W CPS1P27614 576 aa8.32□□□□□ -1.08
LDB16YCL005W NST1P53935 1240 aa8.32□□□□□ -1.08
LDB16YCL005W PML39Q03760 334 aa8.32□□□□□ -1.08
LDB16YCL005W DIT2P21595 489 aa8.31□□□□□ -1.08
LDB16YCL005W AIM7Q12156 149 aa8.31□□□□□ -1.08
LDB16YCL005W YML133CQ03099 1374 aa8.3□□□□□ -1.08
LDB16YCL005W YLL067CQ07888 1374 aa8.3□□□□□ -1.08
LDB16YCL005W YLL066CQ99208 1374 aa8.3□□□□□ -1.08
LDB16YCL005W LEU2P04173 364 aaPredicted RBP8.29□□□□□ -1.08
LDB16YCL005W PCS60P38137 543 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
LDB16YCL005W THI12P42883 340 aa8.29□□□□□ -1.08
LDB16YCL005W THI5P43534 340 aa8.29□□□□□ -1.08
LDB16YCL005W THI11P47183 340 aa8.29□□□□□ -1.08
LDB16YCL005W THI13Q07748 340 aa8.29□□□□□ -1.08
LDB16YCL005W MTR4P47047 1073 aaKnown RBP8.28□□□□□ -1.08
LDB16YCL005W GLC3P32775 704 aa8.27□□□□□ -1.09
LDB16YCL005W ATF2P53296 535 aa8.27□□□□□ -1.09
LDB16YCL005W KIN1P13185 1064 aa8.26□□□□□ -1.09
LDB16YCL005W ELP4Q02884 456 aaKnown RBP8.26□□□□□ -1.09
LDB16YCL005W PDI1P17967 522 aaKnown RBP8.25□□□□□ -1.09
LDB16YCL005W RTF1P53064 558 aa8.25□□□□□ -1.09
LDB16YCL005W RPP1BP10622 106 aaKnown RBP8.24□□□□□ -1.09
LDB16YCL005W PSE1P32337 1089 aaKnown RBP8.24□□□□□ -1.09
LDB16YCL005W TAP42Q04372 366 aa8.24□□□□□ -1.09
LDB16YCL005W YEF3P16521 1044 aaKnown RBP8.23□□□□□ -1.09
LDB16YCL005W PRS1P32895 427 aaKnown RBP8.23□□□□□ -1.09
LDB16YCL005W IOC4Q04213 475 aa8.23□□□□□ -1.09
LDB16YCL005W YDR344CQ05510 147 aa8.23□□□□□ -1.09
LDB16YCL005W ADE6P38972 1358 aaKnown RBP8.22□□□□□ -1.09
LDB16YCL005W TRK1P12685 1235 aa8.22□□□□□ -1.09
LDB16YCL005W KAR2P16474 682 aaKnown RBP8.22□□□□□ -1.09
LDB16YCL005W CSE4P36012 229 aa8.22□□□□□ -1.09
LDB16YCL005W VRP1P37370 817 aa8.22□□□□□ -1.09
LDB16YCL005W TY4B-HP0C2J7 1802 aa8.22□□□□□ -1.09
LDB16YCL005W TY4B-JP47024 1803 aa8.22□□□□□ -1.09
LDB16YCL005W GRX4P32642 244 aa8.21□□□□□ -1.1
LDB16YCL005W ILV3P39522 585 aaKnown RBP8.21□□□□□ -1.1
LDB16YCL005W PRP43P53131 767 aaKnown RBP8.21□□□□□ -1.1
LDB16YCL005W SNF2P22082 1703 aa8.2□□□□□ -1.1
LDB16YCL005W RPS24AP0CX31 135 aaKnown RBP8.2□□□□□ -1.1
LDB16YCL005W RPS24BP0CX32 135 aaKnown RBP8.2□□□□□ -1.1
LDB16YCL005W ARH1P48360 493 aa8.2□□□□□ -1.1
LDB16YCL005W RPP0P05317 312 aaKnown RBP8.19□□□□□ -1.1
LDB16YCL005W XDJ1P39102 459 aa8.19□□□□□ -1.1
LDB16YCL005W MID1P41821 548 aa8.19□□□□□ -1.1
LDB16YCL005W SLI15P38283 698 aa8.18□□□□□ -1.1
LDB16YCL005W ORC6P38826 435 aa8.18□□□□□ -1.1
LDB16YCL005W PAP2P53632 584 aaKnown RBP8.17□□□□□ -1.1
LDB16YCL005W HIM1Q06674 414 aa8.17□□□□□ -1.1
LDB16YCL005W VPS27P40343 622 aaKnown RBP8.16□□□□□ -1.1
LDB16YCL005W HGH1P48362 394 aaKnown RBP8.16□□□□□ -1.1
LDB16YCL005W PEX29Q03370 554 aa8.16□□□□□ -1.1
LDB16YCL005W YDL144CQ07589 356 aa8.16□□□□□ -1.1
LDB16YCL005W GAS4Q08271 471 aa8.16□□□□□ -1.1
LDB16YCL005W AUS1Q08409 1394 aa8.16□□□□□ -1.1
LDB16YCL005W DPS1P04802 557 aaKnown RBP8.15□□□□□ -1.1
LDB16YCL005W CSC1Q06538 782 aa8.15□□□□□ -1.1
LDB16YCL005W CDC45Q08032 650 aa8.15□□□□□ -1.1
LDB16YCL005W RTR1P40084 226 aaPredicted RBP8.14□□□□□ -1.11
LDB16YCL005W DMA2P53924 522 aa8.14□□□□□ -1.11
LDB16YCL005W RRP5Q05022 1729 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms