RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
SMP1	YBR182C	BIM1	P40013	344 aa		7.35	□□□□□ -1.23
SMP1	YBR182C	YJL007C	P47080	104 aa		7.35	□□□□□ -1.23
SMP1	YBR182C	TRM1	P15565	570 aa	Known RBP	7.34	□□□□□ -1.23
SMP1	YBR182C	UGA3	P26370	528 aa		7.34	□□□□□ -1.23
SMP1	YBR182C	IXR1	P33417	597 aa		7.34	□□□□□ -1.23
SMP1	YBR182C	SLD2	P34252	453 aa		7.34	□□□□□ -1.23
SMP1	YBR182C	CSN12	P47130	423 aa		7.34	□□□□□ -1.23
SMP1	YBR182C	NOP7	P53261	605 aa	Known RBP	7.34	□□□□□ -1.23
SMP1	YBR182C	YPR097W	Q06839	1073 aa		7.34	□□□□□ -1.23
SMP1	YBR182C	SRF1	Q12516	437 aa		7.34	□□□□□ -1.23
SMP1	YBR182C	NAP1	P25293	417 aa	Known RBP	7.33	□□□□□ -1.24
SMP1	YBR182C	YJR115W	P47152	169 aa		7.33	□□□□□ -1.24
SMP1	YBR182C	ORC1	P54784	914 aa	Predicted RBP	7.33	□□□□□ -1.24
SMP1	YBR182C	ESS1	P22696	170 aa		7.32	□□□□□ -1.24
SMP1	YBR182C	RPL34B	P40525	121 aa	Known RBP	7.32	□□□□□ -1.24
SMP1	YBR182C	LCB5	Q06147	687 aa	Known RBP	7.32	□□□□□ -1.24
SMP1	YBR182C	ATG32	P40458	529 aa		7.31	□□□□□ -1.24
SMP1	YBR182C	MSB3	P48566	633 aa	Predicted RBP	7.31	□□□□□ -1.24
SMP1	YBR182C	TYW1	Q08960	810 aa	Known RBP	7.28	□□□□□ -1.24
SMP1	YBR182C	RPL34A	P87262	121 aa	Predicted RBP	7.27	□□□□□ -1.25
SMP1	YBR182C	YLR346C	Q06139	101 aa		7.27	□□□□□ -1.25
SMP1	YBR182C	SNU71	P53207	620 aa	Known RBP	7.26	□□□□□ -1.25
SMP1	YBR182C	PKH3	Q03306	898 aa	Predicted RBP	7.26	□□□□□ -1.25
SMP1	YBR182C	ARG8	P18544	423 aa		7.25	□□□□□ -1.25
SMP1	YBR182C	YJU3	P28321	313 aa		7.25	□□□□□ -1.25
SMP1	YBR182C	RTT106	P40161	455 aa		7.25	□□□□□ -1.25
SMP1	YBR182C	TIF1	P10081	395 aa	Known RBP	7.24	□□□□□ -1.25
SMP1	YBR182C	MRX12	P47084	519 aa		7.23	□□□□□ -1.25
SMP1	YBR182C	YBL036C	P38197	257 aa		7.22	□□□□□ -1.25
SMP1	YBR182C	PTK2	P47116	818 aa	Known RBP	7.22	□□□□□ -1.25
SMP1	YBR182C	YDL176W	Q12027	708 aa		7.22	□□□□□ -1.25
SMP1	YBR182C	CDC3	P32457	520 aa	Known RBP	7.21	□□□□□ -1.25
SMP1	YBR182C	CPS1	P27614	576 aa		7.2	□□□□□ -1.26
SMP1	YBR182C	MRT4	P33201	236 aa	Known RBP	7.2	□□□□□ -1.26
SMP1	YBR182C	VAC17	P25591	423 aa		7.2	□□□□□ -1.26
SMP1	YBR182C	YPR204W	Q08995	1032 aa		7.2	□□□□□ -1.26
SMP1	YBR182C	TTI1	P36097	1038 aa		7.19	□□□□□ -1.26
SMP1	YBR182C	HEM3	P28789	327 aa		7.18	□□□□□ -1.26
SMP1	YBR182C	RTG2	P32608	588 aa	Known RBP	7.18	□□□□□ -1.26
SMP1	YBR182C	IOC4	Q04213	475 aa		7.18	□□□□□ -1.26
SMP1	YBR182C	RSC30	P38781	883 aa		7.17	□□□□□ -1.26
SMP1	YBR182C	MET10	P39692	1035 aa		7.17	□□□□□ -1.26
SMP1	YBR182C	NUP85	P46673	744 aa		7.17	□□□□□ -1.26
SMP1	YBR182C	OPT2	Q06593	877 aa		7.17	□□□□□ -1.26
SMP1	YBR182C	ARG82	P07250	355 aa		7.16	□□□□□ -1.26
SMP1	YBR182C	KTR1	P27810	393 aa	Known RBP	7.16	□□□□□ -1.26
SMP1	YBR182C	CSE4	P36012	229 aa		7.15	□□□□□ -1.26
SMP1	YBR182C	NOB1	Q08444	459 aa	Known RBP	7.15	□□□□□ -1.26
SMP1	YBR182C	SSF1	P38789	453 aa	Predicted RBP	7.14	□□□□□ -1.27
SMP1	YBR182C	CAF120	P53836	1060 aa		7.14	□□□□□ -1.27
SMP1	YBR182C	APP1	P53933	587 aa		7.14	□□□□□ -1.27
SMP1	YBR182C	MIP1	P15801	1254 aa		7.13	□□□□□ -1.27
SMP1	YBR182C	BIO2	P32451	375 aa		7.12	□□□□□ -1.27
SMP1	YBR182C	SCW11	P53189	542 aa		7.12	□□□□□ -1.27
SMP1	YBR182C	RAD59	Q12223	238 aa		7.12	□□□□□ -1.27
SMP1	YBR182C	RRN6	P32786	894 aa		7.11	□□□□□ -1.27
SMP1	YBR182C	LSC2	P53312	427 aa		7.11	□□□□□ -1.27
SMP1	YBR182C	YNL108C	P53929	270 aa		7.11	□□□□□ -1.27
SMP1	YBR182C	SIS2	P36024	562 aa		7.1	□□□□□ -1.27
SMP1	YBR182C	PAM1	P37304	830 aa	Known RBP	7.1	□□□□□ -1.27
SMP1	YBR182C	UBP2	Q01476	1272 aa		7.1	□□□□□ -1.27
SMP1	YBR182C	GLY1	P37303	387 aa	Known RBP	7.09	□□□□□ -1.27
SMP1	YBR182C	YBL086C	P38177	466 aa		7.09	□□□□□ -1.27
SMP1	YBR182C	ACO2	P39533	789 aa		7.09	□□□□□ -1.27
SMP1	YBR182C	SEN54	Q02825	467 aa	Predicted RBP	7.09	□□□□□ -1.27
SMP1	YBR182C	HAT1	Q12341	374 aa		7.09	□□□□□ -1.27
SMP1	YBR182C	ITT1	Q04638	464 aa		7.08	□□□□□ -1.28
SMP1	YBR182C	TEC1	P18412	486 aa		7.08	□□□□□ -1.28
SMP1	YBR182C	EMW1	P42842	904 aa	Known RBP	7.08	□□□□□ -1.28
SMP1	YBR182C	AAD14	P42884	376 aa		7.08	□□□□□ -1.28
SMP1	YBR182C	MKS1	P34072	584 aa		7.07	□□□□□ -1.28
SMP1	YBR182C	FIG4	P42837	879 aa		7.07	□□□□□ -1.28
SMP1	YBR182C	SUP45	P12385	437 aa	Known RBP	7.06	□□□□□ -1.28
SMP1	YBR182C	PUP1	P25043	261 aa		7.06	□□□□□ -1.28
SMP1	YBR182C	ASF1	P32447	279 aa		7.05	□□□□□ -1.28
SMP1	YBR182C	YML083C	Q04526	418 aa		7.05	□□□□□ -1.28
SMP1	YBR182C	SPT5	P27692	1063 aa	Known RBP	7.04	□□□□□ -1.28
SMP1	YBR182C	BDS1	Q08347	646 aa		7.04	□□□□□ -1.28
SMP1	YBR182C	DLD1	P32891	587 aa		7.03	□□□□□ -1.28
SMP1	YBR182C	STM1	P39015	273 aa	Known RBP	7.03	□□□□□ -1.28
SMP1	YBR182C	TY1A-BL	Q12266	440 aa		7.03	□□□□□ -1.28
SMP1	YBR182C	GUT2	P32191	649 aa		7.02	□□□□□ -1.29
SMP1	YBR182C	DFG5	Q05031	458 aa		7.02	□□□□□ -1.29
SMP1	YBR182C	ENO1	P00924	437 aa	Known RBP	7.01	□□□□□ -1.29
SMP1	YBR182C	YIR007W	P40566	764 aa		7.01	□□□□□ -1.29
SMP1	YBR182C	YGR035C	P53222	116 aa		7.01	□□□□□ -1.29
SMP1	YBR182C	TCB1	Q12466	1186 aa		7.01	□□□□□ -1.29
SMP1	YBR182C	SEC20	P28791	383 aa		7	□□□□□ -1.29
SMP1	YBR182C	TGL4	P36165	910 aa		7	□□□□□ -1.29
SMP1	YBR182C	YJR098C	P47139	656 aa		7	□□□□□ -1.29
SMP1	YBR182C	ENO2	P00925	437 aa	Known RBP	6.99	□□□□□ -1.29
SMP1	YBR182C	MAK16	P10962	306 aa	Predicted RBP	6.99	□□□□□ -1.29
SMP1	YBR182C	MRX10	Q05648	414 aa		6.99	□□□□□ -1.29
SMP1	YBR182C	RPP2B	P02400	110 aa	Known RBP	6.98	□□□□□ -1.29
SMP1	YBR182C	STE20	Q03497	939 aa	Known RBP	6.98	□□□□□ -1.29
SMP1	YBR182C	YTA7	P40340	1379 aa		6.97	□□□□□ -1.29
SMP1	YBR182C	YDJ1	P25491	409 aa	Known RBP	6.97	□□□□□ -1.29
SMP1	YBR182C	TRK2	P28584	889 aa		6.97	□□□□□ -1.29
SMP1	YBR182C	FBP26	P32604	452 aa		6.97	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms