RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W VHR2P40041 505 aa6.34□□□□□ -1.39
SIF2YBR103W ENT1Q12518 454 aa6.34□□□□□ -1.39
SIF2YBR103W YLR419WQ06698 1435 aaKnown RBP6.34□□□□□ -1.39
SIF2YBR103W GLN1P32288 370 aaKnown RBP6.33□□□□□ -1.4
SIF2YBR103W UBP14P38237 781 aaKnown RBP6.33□□□□□ -1.4
SIF2YBR103W KIC1P38692 1080 aa6.33□□□□□ -1.4
SIF2YBR103W RPL34BP40525 121 aaKnown RBP6.33□□□□□ -1.4
SIF2YBR103W YFR016CP43597 1233 aaKnown RBP6.32□□□□□ -1.4
SIF2YBR103W KIP3P53086 805 aaKnown RBP6.32□□□□□ -1.4
SIF2YBR103W ATG32P40458 529 aa6.32□□□□□ -1.4
SIF2YBR103W RPS0BP46654 252 aaKnown RBP6.32□□□□□ -1.4
SIF2YBR103W ENV9Q08651 330 aa6.32□□□□□ -1.4
SIF2YBR103W YDR090CQ03193 310 aa6.31□□□□□ -1.4
SIF2YBR103W PSE1P32337 1089 aaKnown RBP6.3□□□□□ -1.4
SIF2YBR103W SCT1P32784 759 aa6.3□□□□□ -1.4
SIF2YBR103W UBP10P53874 792 aaPredicted RBP6.3□□□□□ -1.4
SIF2YBR103W PRP45P28004 379 aaPredicted RBP6.29□□□□□ -1.4
SIF2YBR103W SLD2P34252 453 aa6.29□□□□□ -1.4
SIF2YBR103W MAP2P38174 421 aaKnown RBP6.29□□□□□ -1.4
SIF2YBR103W PRP43P53131 767 aaKnown RBP6.29□□□□□ -1.4
SIF2YBR103W HAA1Q12753 694 aaKnown RBP6.29□□□□□ -1.4
SIF2YBR103W YMR074CQ04773 145 aa6.28□□□□□ -1.4
SIF2YBR103W IMH1Q06704 911 aaKnown RBP6.28□□□□□ -1.4
SIF2YBR103W YOR238WQ08634 303 aa6.28□□□□□ -1.4
SIF2YBR103W PRP5P21372 849 aaPredicted RBP6.28□□□□□ -1.4
SIF2YBR103W SLX5P32828 619 aaKnown RBP6.28□□□□□ -1.4
SIF2YBR103W ORC1P54784 914 aaPredicted RBP6.28□□□□□ -1.4
SIF2YBR103W RPL34AP87262 121 aaPredicted RBP6.28□□□□□ -1.4
SIF2YBR103W MLP1Q02455 1875 aaKnown RBP6.27□□□□□ -1.41
SIF2YBR103W URB1P34241 1764 aaKnown RBP6.27□□□□□ -1.41
SIF2YBR103W ENP1P38333 483 aaKnown RBP6.27□□□□□ -1.41
SIF2YBR103W CHZ1P40019 153 aaPredicted RBP6.27□□□□□ -1.41
SIF2YBR103W YML133CQ03099 1374 aa6.26□□□□□ -1.41
SIF2YBR103W YLL067CQ07888 1374 aa6.26□□□□□ -1.41
SIF2YBR103W YLL066CQ99208 1374 aa6.26□□□□□ -1.41
SIF2YBR103W LEU2P04173 364 aaPredicted RBP6.26□□□□□ -1.41
SIF2YBR103W TIF1P10081 395 aaKnown RBP6.26□□□□□ -1.41
SIF2YBR103W MTR4P47047 1073 aaKnown RBP6.26□□□□□ -1.41
SIF2YBR103W TCB2P48231 1178 aa6.26□□□□□ -1.41
SIF2YBR103W YLR326WQ06170 240 aaKnown RBP6.26□□□□□ -1.41
SIF2YBR103W YRF1-3P0CX14 1859 aa6.26□□□□□ -1.41
SIF2YBR103W YRF1-7P0CX15 1859 aa6.26□□□□□ -1.41
SIF2YBR103W YRF1-6P53819 1859 aa6.26□□□□□ -1.41
SIF2YBR103W YIL177CP40434 1758 aa6.26□□□□□ -1.41
SIF2YBR103W YJL225CP40889 1758 aa6.26□□□□□ -1.41
SIF2YBR103W ATH1P48016 1211 aa6.25□□□□□ -1.41
SIF2YBR103W YBL036CP38197 257 aa6.25□□□□□ -1.41
SIF2YBR103W TEA1P47988 759 aa6.25□□□□□ -1.41
SIF2YBR103W MSB3P48566 633 aaPredicted RBP6.25□□□□□ -1.41
SIF2YBR103W FKS3Q04952 1785 aa6.24□□□□□ -1.41
SIF2YBR103W RAD54P32863 898 aa6.24□□□□□ -1.41
SIF2YBR103W RSF2P46974 1380 aa6.24□□□□□ -1.41
SIF2YBR103W ERG12P07277 443 aa6.23□□□□□ -1.41
SIF2YBR103W YPR204WQ08995 1032 aa6.23□□□□□ -1.41
SIF2YBR103W SNU71P53207 620 aaKnown RBP6.22□□□□□ -1.41
SIF2YBR103W GRE2Q12068 342 aaKnown RBP6.22□□□□□ -1.41
SIF2YBR103W SLM3Q12093 417 aa6.22□□□□□ -1.41
SIF2YBR103W QCR6P00127 147 aa6.21□□□□□ -1.41
SIF2YBR103W YCK3P39962 524 aa6.21□□□□□ -1.41
SIF2YBR103W FKH1P40466 484 aa6.21□□□□□ -1.41
SIF2YBR103W EDE1P34216 1381 aa6.21□□□□□ -1.41
SIF2YBR103W APC1P53886 1748 aa6.21□□□□□ -1.42
SIF2YBR103W KTR1P27810 393 aaKnown RBP6.21□□□□□ -1.42
SIF2YBR103W GUT1P32190 709 aa6.21□□□□□ -1.42
SIF2YBR103W CDC3P32457 520 aaKnown RBP6.21□□□□□ -1.42
SIF2YBR103W RTG2P32608 588 aaKnown RBP6.21□□□□□ -1.42
SIF2YBR103W CSE4P36012 229 aa6.21□□□□□ -1.42
SIF2YBR103W TCB1Q12466 1186 aa6.21□□□□□ -1.42
SIF2YBR103W ROM2P51862 1356 aaKnown RBP6.21□□□□□ -1.42
SIF2YBR103W RPS24AP0CX31 135 aaKnown RBP6.2□□□□□ -1.42
SIF2YBR103W RPS24BP0CX32 135 aaKnown RBP6.2□□□□□ -1.42
SIF2YBR103W TTI1P36097 1038 aa6.2□□□□□ -1.42
SIF2YBR103W YRB30P53107 440 aaPredicted RBP6.2□□□□□ -1.42
SIF2YBR103W TYW1Q08960 810 aaKnown RBP6.2□□□□□ -1.42
SIF2YBR103W BIO2P32451 375 aa6.19□□□□□ -1.42
SIF2YBR103W YGR273CP53329 174 aa6.19□□□□□ -1.42
SIF2YBR103W KEX1P09620 729 aa6.18□□□□□ -1.42
SIF2YBR103W VMA1P17255 1071 aaKnown RBP6.18□□□□□ -1.42
SIF2YBR103W BUD31P25337 157 aaPredicted RBP6.18□□□□□ -1.42
SIF2YBR103W PCS60P38137 543 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
SIF2YBR103W MHP1P43638 1398 aa6.18□□□□□ -1.42
SIF2YBR103W CLB5P30283 435 aa6.17□□□□□ -1.42
SIF2YBR103W DOT5P40553 215 aa6.17□□□□□ -1.42
SIF2YBR103W PIB1Q06651 286 aa6.17□□□□□ -1.42
SIF2YBR103W YEF3P16521 1044 aaKnown RBP6.17□□□□□ -1.42
SIF2YBR103W ORC6P38826 435 aa6.17□□□□□ -1.42
SIF2YBR103W TAP42Q04372 366 aa6.17□□□□□ -1.42
SIF2YBR103W NOB1Q08444 459 aaKnown RBP6.17□□□□□ -1.42
SIF2YBR103W PDI1P17967 522 aaKnown RBP6.16□□□□□ -1.42
SIF2YBR103W SSF1P38789 453 aaPredicted RBP6.16□□□□□ -1.42
SIF2YBR103W YNL108CP53929 270 aa6.16□□□□□ -1.42
SIF2YBR103W SNF2P22082 1703 aa6.16□□□□□ -1.42
SIF2YBR103W POL5P39985 1022 aaKnown RBP6.15□□□□□ -1.42
SIF2YBR103W AUS1Q08409 1394 aa6.15□□□□□ -1.43
SIF2YBR103W UBP1P25037 809 aa6.14□□□□□ -1.43
SIF2YBR103W GRX4P32642 244 aa6.14□□□□□ -1.43
SIF2YBR103W XKS1P42826 600 aa6.14□□□□□ -1.43
SIF2YBR103W RTF1P53064 558 aa6.14□□□□□ -1.43
SIF2YBR103W FOX2Q02207 900 aaKnown RBP6.14□□□□□ -1.43
SIF2YBR103W YAP5P40574 245 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms