RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C TY1A-NL2Q12470 440 aa8.99□□□□□ -0.97
CDS1YBR029C TY1A-GR2Q12485 440 aa8.99□□□□□ -0.97
CDS1YBR029C RDS2P19541 446 aaKnown RBP8.98□□□□□ -0.97
CDS1YBR029C MRX12P47084 519 aa8.98□□□□□ -0.97
CDS1YBR029C PRT1P06103 763 aaKnown RBP8.97□□□□□ -0.97
CDS1YBR029C HAT1Q12341 374 aa8.96□□□□□ -0.98
CDS1YBR029C GAL2P13181 574 aa8.95□□□□□ -0.98
CDS1YBR029C RRN7P40992 514 aa8.95□□□□□ -0.98
CDS1YBR029C YDR344CQ05510 147 aa8.94□□□□□ -0.98
CDS1YBR029C FRA1Q07825 749 aa8.94□□□□□ -0.98
CDS1YBR029C CHL1P22516 861 aaPredicted RBP8.93□□□□□ -0.98
CDS1YBR029C UBX7P38349 436 aa8.93□□□□□ -0.98
CDS1YBR029C PAC1P39946 494 aaKnown RBP8.93□□□□□ -0.98
CDS1YBR029C FIG4P42837 879 aa8.93□□□□□ -0.98
CDS1YBR029C PDC1P06169 563 aaKnown RBP8.92□□□□□ -0.98
CDS1YBR029C SPT16P32558 1035 aaKnown RBP8.92□□□□□ -0.98
CDS1YBR029C BCK2P33306 851 aa8.92□□□□□ -0.98
CDS1YBR029C SSF1P38789 453 aaPredicted RBP8.92□□□□□ -0.98
CDS1YBR029C HXT10P43581 546 aa8.89□□□□□ -0.99
CDS1YBR029C SOH1P38633 127 aa8.88□□□□□ -0.99
CDS1YBR029C YML082WQ04533 649 aaKnown RBP8.88□□□□□ -0.99
CDS1YBR029C UTP13Q05946 817 aaKnown RBP8.88□□□□□ -0.99
CDS1YBR029C HAP4P14064 554 aa8.87□□□□□ -0.99
CDS1YBR029C PHO87P25360 923 aa8.87□□□□□ -0.99
CDS1YBR029C PRE3P38624 215 aa8.87□□□□□ -0.99
CDS1YBR029C YPR084WQ06821 456 aa8.87□□□□□ -0.99
CDS1YBR029C YPR015CQ12531 247 aa8.86□□□□□ -0.99
CDS1YBR029C YEL077CQ3E7X8 1277 aa8.86□□□□□ -0.99
CDS1YBR029C HEM3P28789 327 aa8.85□□□□□ -0.99
CDS1YBR029C PUF6Q04373 656 aaKnown RBP8.85□□□□□ -0.99
CDS1YBR029C VAC17P25591 423 aa8.84□□□□□ -0.99
CDS1YBR029C GYP1Q08484 637 aa8.83□□□□□ -1
CDS1YBR029C TPD3P31383 635 aa8.82□□□□□ -1
CDS1YBR029C STM1P39015 273 aaKnown RBP8.82□□□□□ -1
CDS1YBR029C RRD1P40454 393 aaKnown RBP8.82□□□□□ -1
CDS1YBR029C ACS2P52910 683 aaKnown RBP8.82□□□□□ -1
CDS1YBR029C TSC13Q99190 310 aa8.82□□□□□ -1
CDS1YBR029C APL6P46682 809 aa8.81□□□□□ -1
CDS1YBR029C SAS4Q04003 481 aa8.81□□□□□ -1
CDS1YBR029C KAR5Q04746 504 aa8.81□□□□□ -1
CDS1YBR029C YBL113CQ7M4S9 792 aa8.81□□□□□ -1
CDS1YBR029C SEN54Q02825 467 aaPredicted RBP8.8□□□□□ -1
CDS1YBR029C YFL034WP43564 1073 aa8.79□□□□□ -1
CDS1YBR029C NOP7P53261 605 aaKnown RBP8.79□□□□□ -1
CDS1YBR029C GAS4Q08271 471 aa8.79□□□□□ -1
CDS1YBR029C PDI1P17967 522 aaKnown RBP8.78□□□□□ -1
CDS1YBR029C SNU71P53207 620 aaKnown RBP8.78□□□□□ -1
CDS1YBR029C CWC15Q03772 175 aaKnown RBP8.78□□□□□ -1
CDS1YBR029C KIP2P28743 706 aa8.77□□□□□ -1.01
CDS1YBR029C SEC20P28791 383 aa8.77□□□□□ -1.01
CDS1YBR029C IXR1P33417 597 aa8.77□□□□□ -1.01
CDS1YBR029C ROM1P53046 1155 aa8.77□□□□□ -1.01
CDS1YBR029C ISR1Q06098 443 aaKnown RBP8.77□□□□□ -1.01
CDS1YBR029C PUN1Q06991 263 aa8.76□□□□□ -1.01
CDS1YBR029C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
CDS1YBR029C VAN1P23642 535 aa8.75□□□□□ -1.01
CDS1YBR029C ERP5P38819 212 aa8.75□□□□□ -1.01
CDS1YBR029C ATG20Q07528 640 aa8.75□□□□□ -1.01
CDS1YBR029C MOD5P07884 428 aa8.74□□□□□ -1.01
CDS1YBR029C MIP1P15801 1254 aa8.74□□□□□ -1.01
CDS1YBR029C MRF1P30775 413 aaPredicted RBP8.74□□□□□ -1.01
CDS1YBR029C PNP1Q05788 311 aa8.74□□□□□ -1.01
CDS1YBR029C TPS3P38426 1054 aaKnown RBP8.73□□□□□ -1.01
CDS1YBR029C AIM9P40053 627 aaKnown RBP8.73□□□□□ -1.01
CDS1YBR029C FUR4P05316 633 aaKnown RBP8.73□□□□□ -1.01
CDS1YBR029C SRS2P12954 1174 aa8.73□□□□□ -1.01
CDS1YBR029C XDJ1P39102 459 aa8.73□□□□□ -1.01
CDS1YBR029C TRS33Q99394 268 aa8.73□□□□□ -1.01
CDS1YBR029C HAL5P38970 855 aaKnown RBP8.72□□□□□ -1.01
CDS1YBR029C IPL1P38991 367 aa8.72□□□□□ -1.01
CDS1YBR029C ITT1Q04638 464 aa8.72□□□□□ -1.01
CDS1YBR029C ASF1P32447 279 aa8.71□□□□□ -1.02
CDS1YBR029C GRS1P38088 690 aaKnown RBP8.71□□□□□ -1.02
CDS1YBR029C HDA3Q06623 655 aa8.71□□□□□ -1.02
CDS1YBR029C RRN6P32786 894 aa8.7□□□□□ -1.02
CDS1YBR029C MSC6Q08818 692 aaKnown RBP8.7□□□□□ -1.02
CDS1YBR029C NTH2P35172 780 aa8.69□□□□□ -1.02
CDS1YBR029C CWH41P53008 833 aa8.69□□□□□ -1.02
CDS1YBR029C SYH1Q02875 849 aaKnown RBP8.69□□□□□ -1.02
CDS1YBR029C TRL1P09880 827 aaKnown RBP8.67□□□□□ -1.02
CDS1YBR029C YHL050CP38721 697 aa8.67□□□□□ -1.02
CDS1YBR029C YHR219WP38900 624 aa8.67□□□□□ -1.02
CDS1YBR029C APP1P53933 587 aa8.67□□□□□ -1.02
CDS1YBR029C ATG1P53104 897 aa8.66□□□□□ -1.02
CDS1YBR029C PUS5Q06244 254 aa8.66□□□□□ -1.02
CDS1YBR029C VRP1P37370 817 aa8.65□□□□□ -1.02
CDS1YBR029C BOL3P39724 118 aa8.65□□□□□ -1.02
CDS1YBR029C MDJ2P42834 146 aa8.65□□□□□ -1.02
CDS1YBR029C GLO3P38682 493 aaKnown RBP8.64□□□□□ -1.03
CDS1YBR029C EMW1P42842 904 aaKnown RBP8.64□□□□□ -1.03
CDS1YBR029C ALD4P46367 519 aaKnown RBP8.64□□□□□ -1.03
CDS1YBR029C CYT1P07143 309 aa8.63□□□□□ -1.03
CDS1YBR029C RPS6AP0CX37 236 aaKnown RBP8.63□□□□□ -1.03
CDS1YBR029C RPS6BP0CX38 236 aaPredicted RBP8.63□□□□□ -1.03
CDS1YBR029C MET10P39692 1035 aa8.63□□□□□ -1.03
CDS1YBR029C THI12P42883 340 aa8.63□□□□□ -1.03
CDS1YBR029C THI5P43534 340 aa8.63□□□□□ -1.03
CDS1YBR029C BDP1P46678 594 aa8.63□□□□□ -1.03
CDS1YBR029C THI11P47183 340 aa8.63□□□□□ -1.03
CDS1YBR029C THI13Q07748 340 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms