RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W RPL40AP0CH08 128 aaKnown RBP1.45□□□□□ -2.18
UTP20YBL004W RPL40BP0CH09 128 aaKnown RBP1.45□□□□□ -2.18
UTP20YBL004W FIR1P40020 876 aa1.44□□□□□ -2.18
UTP20YBL004W ZDS1P50111 915 aaKnown RBP1.44□□□□□ -2.18
UTP20YBL004W ADR1P07248 1323 aa1.44□□□□□ -2.18
UTP20YBL004W STS1P38637 319 aa1.44□□□□□ -2.18
UTP20YBL004W BUG1Q12191 341 aa1.44□□□□□ -2.18
UTP20YBL004W FAA3P39002 694 aa1.44□□□□□ -2.18
UTP20YBL004W YER158CP40095 573 aa1.44□□□□□ -2.18
UTP20YBL004W DOT5P40553 215 aa1.43□□□□□ -2.18
UTP20YBL004W RPN11P43588 306 aaKnown RBP1.43□□□□□ -2.18
UTP20YBL004W FOX2Q02207 900 aaKnown RBP1.43□□□□□ -2.18
UTP20YBL004W ATG20Q07528 640 aa1.43□□□□□ -2.18
UTP20YBL004W DAP1Q12091 152 aa1.43□□□□□ -2.18
UTP20YBL004W FBP1P09201 348 aa1.43□□□□□ -2.18
UTP20YBL004W RET1P22276 1149 aaKnown RBP1.43□□□□□ -2.18
UTP20YBL004W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
UTP20YBL004W RAD59Q12223 238 aa1.43□□□□□ -2.18
UTP20YBL004W GRX6Q12438 231 aa1.43□□□□□ -2.18
UTP20YBL004W ERO1Q03103 563 aa1.43□□□□□ -2.18
UTP20YBL004W YKR075CP36155 307 aa1.42□□□□□ -2.18
UTP20YBL004W SCT1P32784 759 aa1.42□□□□□ -2.18
UTP20YBL004W SSK22P25390 1331 aaPredicted RBP1.42□□□□□ -2.18
UTP20YBL004W KIP3P53086 805 aaKnown RBP1.42□□□□□ -2.18
UTP20YBL004W TUM1Q08686 304 aaKnown RBP1.42□□□□□ -2.18
UTP20YBL004W FAS2P19097 1887 aaKnown RBP1.42□□□□□ -2.18
UTP20YBL004W KRE5P22023 1365 aa1.42□□□□□ -2.18
UTP20YBL004W APE3P37302 537 aaKnown RBP1.42□□□□□ -2.18
UTP20YBL004W MDG1P53885 366 aa1.42□□□□□ -2.18
UTP20YBL004W TIM50Q02776 476 aa1.42□□□□□ -2.18
UTP20YBL004W TY4B-JP47024 1803 aa1.41□□□□□ -2.18
UTP20YBL004W PEA2P40091 420 aa1.41□□□□□ -2.18
UTP20YBL004W MEC3Q02574 474 aa1.41□□□□□ -2.18
UTP20YBL004W HEM1P09950 548 aaPredicted RBP1.41□□□□□ -2.18
UTP20YBL004W DIT2P21595 489 aa1.41□□□□□ -2.18
UTP20YBL004W YHR131CP38835 850 aa1.41□□□□□ -2.18
UTP20YBL004W MSN5P52918 1224 aa1.4□□□□□ -2.18
UTP20YBL004W TY3A-GQ12173 290 aa1.4□□□□□ -2.18
UTP20YBL004W MSB4Q12317 492 aa1.4□□□□□ -2.18
UTP20YBL004W TY3A-IQ99219 290 aa1.4□□□□□ -2.18
UTP20YBL004W YKR018CP36114 725 aa1.4□□□□□ -2.18
UTP20YBL004W NST1P53935 1240 aa1.4□□□□□ -2.18
UTP20YBL004W SSL1Q04673 461 aaPredicted RBP1.4□□□□□ -2.18
UTP20YBL004W PRP5P21372 849 aaPredicted RBP1.4□□□□□ -2.19
UTP20YBL004W LYS4P49367 693 aaPredicted RBP1.4□□□□□ -2.19
UTP20YBL004W CWC15Q03772 175 aaKnown RBP1.4□□□□□ -2.19
UTP20YBL004W ICL2Q12031 575 aa1.4□□□□□ -2.19
UTP20YBL004W RAV1P47104 1357 aa1.4□□□□□ -2.19
UTP20YBL004W KIN4Q01919 800 aa1.4□□□□□ -2.19
UTP20YBL004W PUF4P25339 888 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19 RIP-Chip
UTP20YBL004W GRX1P25373 110 aaKnown RBP1.4□□□□□ -2.19
UTP20YBL004W LEU3P08638 886 aa1.4□□□□□ -2.19
UTP20YBL004W VPS29P38759 282 aa1.4□□□□□ -2.19
UTP20YBL004W NAP1P25293 417 aaKnown RBP1.39□□□□□ -2.19
UTP20YBL004W UBX2Q04228 584 aa1.39□□□□□ -2.19
UTP20YBL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
UTP20YBL004W FKH1P40466 484 aa1.39□□□□□ -2.19
UTP20YBL004W MRX12P47084 519 aa1.39□□□□□ -2.19
UTP20YBL004W POA1P38218 177 aa1.39□□□□□ -2.19
UTP20YBL004W SFB3P38810 929 aa1.38□□□□□ -2.19
UTP20YBL004W YJL045WP47052 634 aa1.38□□□□□ -2.19
UTP20YBL004W YPL034WQ03083 165 aa1.38□□□□□ -2.19
UTP20YBL004W RBA50Q04418 439 aa1.38□□□□□ -2.19
UTP20YBL004W AAD16Q02895 342 aa1.38□□□□□ -2.19
UTP20YBL004W SYN8P31377 255 aa1.38□□□□□ -2.19
UTP20YBL004W TYS1P36421 394 aaKnown RBP1.38□□□□□ -2.19
UTP20YBL004W LDB19Q12502 818 aa1.38□□□□□ -2.19
UTP20YBL004W SAF1P38352 637 aa1.38□□□□□ -2.19
UTP20YBL004W BFA1P47113 574 aa1.38□□□□□ -2.19
UTP20YBL004W YGR130CP53278 816 aa1.38□□□□□ -2.19
UTP20YBL004W SIT4P20604 311 aa1.38□□□□□ -2.19
UTP20YBL004W AFG2P32794 780 aa1.38□□□□□ -2.19
UTP20YBL004W VHR2P40041 505 aa1.38□□□□□ -2.19
UTP20YBL004W TCB1Q12466 1186 aa1.38□□□□□ -2.19
UTP20YBL004W YLR225CQ05948 407 aaKnown RBP1.37□□□□□ -2.19
UTP20YBL004W OYE3P41816 400 aaPredicted RBP1.37□□□□□ -2.19
UTP20YBL004W UTP10P42945 1769 aaKnown RBP1.37□□□□□ -2.19
UTP20YBL004W PTP1P25044 335 aa1.37□□□□□ -2.19
UTP20YBL004W FLO1P32768 1537 aa1.37□□□□□ -2.19
UTP20YBL004W PCS60P38137 543 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
UTP20YBL004W DCD1P06773 312 aa1.37□□□□□ -2.19
UTP20YBL004W GYL1Q04322 720 aa1.37□□□□□ -2.19
UTP20YBL004W CRF1Q04930 467 aa1.37□□□□□ -2.19
UTP20YBL004W WHI4Q07655 649 aaKnown RBP1.36□□□□□ -2.19
UTP20YBL004W SLM3Q12093 417 aa1.36□□□□□ -2.19
UTP20YBL004W TY4B-HP0C2J7 1802 aa1.36□□□□□ -2.19
UTP20YBL004W TIM23P32897 222 aa1.36□□□□□ -2.19
UTP20YBL004W EMP47P43555 445 aa1.36□□□□□ -2.19
UTP20YBL004W MXR1P40029 184 aa1.36□□□□□ -2.19
UTP20YBL004W SPR3P41901 512 aa1.36□□□□□ -2.19
UTP20YBL004W EAF6P47128 113 aa1.36□□□□□ -2.19
UTP20YBL004W LDH1P38139 375 aa1.36□□□□□ -2.19
UTP20YBL004W PAH1P32567 862 aa1.35□□□□□ -2.19
UTP20YBL004W IDI1P15496 288 aa1.35□□□□□ -2.19
UTP20YBL004W FAP1P53971 965 aa1.35□□□□□ -2.19
UTP20YBL004W CSR2Q12734 1121 aa1.35□□□□□ -2.19
UTP20YBL004W CHZ1P40019 153 aaPredicted RBP1.35□□□□□ -2.19
UTP20YBL004W PEX2P32800 271 aa1.34□□□□□ -2.19
UTP20YBL004W DIP2Q12220 943 aaPredicted RBP1.34□□□□□ -2.19
UTP20YBL004W SQS1P53866 767 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms