RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W KIP2P28743 706 aa2.94□□□□□ -1.94
VPS8YAL002W BRN1P38170 754 aa2.94□□□□□ -1.94
VPS8YAL002W KXD1P53158 218 aa2.94□□□□□ -1.94
VPS8YAL002W ORC1P54784 914 aaPredicted RBP2.94□□□□□ -1.94
VPS8YAL002W DAT1P13483 248 aaKnown RBP2.93□□□□□ -1.94
VPS8YAL002W PAT1P25644 796 aaKnown RBP2.93□□□□□ -1.94
VPS8YAL002W MET1P36150 593 aa2.93□□□□□ -1.94
VPS8YAL002W ISM1P48526 1002 aa2.93□□□□□ -1.94
VPS8YAL002W SIT4P20604 311 aa2.93□□□□□ -1.94
VPS8YAL002W CWH41P53008 833 aa2.93□□□□□ -1.94
VPS8YAL002W TUB4P53378 473 aa2.93□□□□□ -1.94
VPS8YAL002W SEN54Q02825 467 aaPredicted RBP2.93□□□□□ -1.94
VPS8YAL002W RAM1P22007 431 aa2.93□□□□□ -1.94
VPS8YAL002W SEC8P32855 1065 aa2.92□□□□□ -1.94
VPS8YAL002W ACS2P52910 683 aaKnown RBP2.92□□□□□ -1.94
VPS8YAL002W SAP30P38429 201 aa2.92□□□□□ -1.94
VPS8YAL002W ALD4P46367 519 aaKnown RBP2.92□□□□□ -1.94
VPS8YAL002W ISR1Q06098 443 aaKnown RBP2.92□□□□□ -1.94
VPS8YAL002W SRP40P32583 406 aaPredicted RBP2.92□□□□□ -1.94
VPS8YAL002W TPS3P38426 1054 aaKnown RBP2.92□□□□□ -1.94
VPS8YAL002W SUT1P53032 299 aaKnown RBP2.92□□□□□ -1.94
VPS8YAL002W HAP4P14064 554 aa2.91□□□□□ -1.94
VPS8YAL002W PAM1P37304 830 aaKnown RBP2.91□□□□□ -1.94
VPS8YAL002W VAC8P39968 578 aa2.91□□□□□ -1.94
VPS8YAL002W QDR1P40475 563 aa2.91□□□□□ -1.94
VPS8YAL002W JIP4Q03361 876 aa2.91□□□□□ -1.94
VPS8YAL002W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
VPS8YAL002W TRS33Q99394 268 aa2.91□□□□□ -1.94
VPS8YAL002W YKL091CP33324 310 aaKnown RBP2.91□□□□□ -1.94
VPS8YAL002W ATE1P16639 503 aa2.91□□□□□ -1.94
VPS8YAL002W MCM2P29469 868 aa2.91□□□□□ -1.94
VPS8YAL002W RTG1P32607 177 aa2.91□□□□□ -1.94
VPS8YAL002W APP1P53933 587 aa2.91□□□□□ -1.94
VPS8YAL002W RDS2P19541 446 aaKnown RBP2.9□□□□□ -1.94
VPS8YAL002W PHO87P25360 923 aa2.9□□□□□ -1.94
VPS8YAL002W SPT16P32558 1035 aaKnown RBP2.9□□□□□ -1.94
VPS8YAL002W FIG4P42837 879 aa2.9□□□□□ -1.94
VPS8YAL002W RTF1P53064 558 aa2.9□□□□□ -1.94
VPS8YAL002W NAF1P53919 492 aaKnown RBP2.9□□□□□ -1.94
VPS8YAL002W MSC6Q08818 692 aaKnown RBP2.9□□□□□ -1.94
VPS8YAL002W ALD6P54115 500 aaKnown RBP2.9□□□□□ -1.95
VPS8YAL002W BOL3P39724 118 aa2.9□□□□□ -1.95
VPS8YAL002W PAC1P39946 494 aaKnown RBP2.9□□□□□ -1.95
VPS8YAL002W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
VPS8YAL002W TBS1P38114 1094 aa2.89□□□□□ -1.95
VPS8YAL002W PEP12P32854 288 aa2.89□□□□□ -1.95
VPS8YAL002W RSC30P38781 883 aa2.89□□□□□ -1.95
VPS8YAL002W TIF11P38912 153 aaKnown RBP2.89□□□□□ -1.95
VPS8YAL002W AIM9P40053 627 aaKnown RBP2.89□□□□□ -1.95
VPS8YAL002W STR2P47164 639 aa2.89□□□□□ -1.95
VPS8YAL002W NST1P53935 1240 aa2.89□□□□□ -1.95
VPS8YAL002W YNL035CP53962 389 aaKnown RBP2.89□□□□□ -1.95
VPS8YAL002W WRS1Q12109 432 aaKnown RBP2.89□□□□□ -1.95
VPS8YAL002W LDB19Q12502 818 aa2.89□□□□□ -1.95
VPS8YAL002W RPT1P33299 467 aaKnown RBP2.89□□□□□ -1.95
VPS8YAL002W NNF1P47149 201 aa2.89□□□□□ -1.95
VPS8YAL002W ISC10P32645 267 aa2.88□□□□□ -1.95
VPS8YAL002W IXR1P33417 597 aa2.88□□□□□ -1.95
VPS8YAL002W NTH2P35172 780 aa2.88□□□□□ -1.95
VPS8YAL002W ROM1P53046 1155 aa2.88□□□□□ -1.95
VPS8YAL002W SPR28Q04921 423 aa2.88□□□□□ -1.95
VPS8YAL002W NUT2Q06213 157 aa2.88□□□□□ -1.95
VPS8YAL002W BDS1Q08347 646 aa2.88□□□□□ -1.95
VPS8YAL002W YTA7P40340 1379 aa2.88□□□□□ -1.95
VPS8YAL002W GAS4Q08271 471 aa2.88□□□□□ -1.95
VPS8YAL002W WHI5Q12416 295 aa2.88□□□□□ -1.95
VPS8YAL002W TSC13Q99190 310 aa2.88□□□□□ -1.95
VPS8YAL002W SRS2P12954 1174 aa2.88□□□□□ -1.95
VPS8YAL002W GAP1P19145 602 aaPredicted RBP2.88□□□□□ -1.95
VPS8YAL002W MDJ2P42834 146 aa2.88□□□□□ -1.95
VPS8YAL002W YFL034WP43564 1073 aa2.88□□□□□ -1.95
VPS8YAL002W RPA14P50106 137 aa2.87□□□□□ -1.95
VPS8YAL002W HAP5Q02516 242 aa2.87□□□□□ -1.95
VPS8YAL002W ATG20Q07528 640 aa2.87□□□□□ -1.95
VPS8YAL002W CYT1P07143 309 aa2.87□□□□□ -1.95
VPS8YAL002W FYV10P40492 516 aa2.87□□□□□ -1.95
VPS8YAL002W FRK1Q03002 865 aaPredicted RBP2.87□□□□□ -1.95
VPS8YAL002W PUS5Q06244 254 aa2.87□□□□□ -1.95
VPS8YAL002W GYP1Q08484 637 aa2.87□□□□□ -1.95
VPS8YAL002W CDC53Q12018 815 aaKnown RBP2.87□□□□□ -1.95
VPS8YAL002W YOR131CQ12486 218 aa2.87□□□□□ -1.95
VPS8YAL002W YDL129WQ07555 291 aa2.87□□□□□ -1.95
VPS8YAL002W SPT2P06843 333 aaPredicted RBP2.86□□□□□ -1.95
VPS8YAL002W RPB10P22139 70 aa2.86□□□□□ -1.95
VPS8YAL002W UTR2P32623 467 aa2.86□□□□□ -1.95
VPS8YAL002W CST6P40535 587 aa2.86□□□□□ -1.95
VPS8YAL002W PUF6Q04373 656 aaKnown RBP2.86□□□□□ -1.95
VPS8YAL002W HDA3Q06623 655 aa2.86□□□□□ -1.95
VPS8YAL002W PDC1P06169 563 aaKnown RBP2.86□□□□□ -1.95
VPS8YAL002W PTC2P39966 464 aaKnown RBP2.86□□□□□ -1.95
VPS8YAL002W VNX1P42839 908 aa2.86□□□□□ -1.95
VPS8YAL002W CWC15Q03772 175 aaKnown RBP2.86□□□□□ -1.95
VPS8YAL002W NCR1Q12200 1170 aa2.86□□□□□ -1.95
VPS8YAL002W FRT1Q99332 602 aa2.86□□□□□ -1.95
VPS8YAL002W SPA2P23201 1466 aaKnown RBP2.86□□□□□ -1.95
VPS8YAL002W YHL008CP38750 627 aa2.86□□□□□ -1.95
VPS8YAL002W ALA1P40825 983 aaKnown RBP2.86□□□□□ -1.95
VPS8YAL002W RNH70P53331 553 aa2.86□□□□□ -1.95
VPS8YAL002W YPR097WQ06839 1073 aa2.86□□□□□ -1.95
VPS8YAL002W FRA1Q07825 749 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms