RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
ATXN3-231ENST00000554994 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
ATXN3-231ENST00000554994 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
ATXN3-231ENST00000554994 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
ATXN3-231ENST00000554994 TBC1D12O60347 775 aa8.66□□□□□ -1.02
ATXN3-231ENST00000554994 FOXK1P85037 733 aa8.65□□□□□ -1.02
ATXN3-231ENST00000554994 FBXO41Q8TF61 875 aa8.65□□□□□ -1.02
ATXN3-231ENST00000554994 WIZO95785 1651 aa8.65□□□□□ -1.03
ATXN3-231ENST00000554994 HECW2Q9P2P5 1572 aa8.65□□□□□ -1.03
ATXN3-231ENST00000554994 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
ATXN3-231ENST00000554994 DSG2Q14126 1118 aa8.64□□□□□ -1.03
ATXN3-231ENST00000554994 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
ATXN3-231ENST00000554994 KIF13AQ9H1H9 1805 aa8.62□□□□□ -1.03
ATXN3-231ENST00000554994 PKD2Q13563 968 aa8.62□□□□□ -1.03
ATXN3-231ENST00000554994 UPF1Q92900 1129 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-231ENST00000554994 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-231ENST00000554994 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
ATXN3-231ENST00000554994 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
ATXN3-231ENST00000554994 ZNF454Q8N9F8 522 aa8.61□□□□□ -1.03
ATXN3-231ENST00000554994 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
ATXN3-231ENST00000554994 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
ATXN3-231ENST00000554994 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
ATXN3-231ENST00000554994 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-231ENST00000554994 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
ATXN3-231ENST00000554994 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-231ENST00000554994 SOCS7O14512 581 aa8.58□□□□□ -1.04
ATXN3-231ENST00000554994 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
ATXN3-231ENST00000554994 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
ATXN3-231ENST00000554994 KDM6BO15054 1643 aa8.56□□□□□ -1.04
ATXN3-231ENST00000554994 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
ATXN3-231ENST00000554994 THSD4Q6ZMP0 1018 aa8.55□□□□□ -1.04
ATXN3-231ENST00000554994 WNT2BQ93097 391 aa8.55□□□□□ -1.04
ATXN3-231ENST00000554994 RAD54L2Q9Y4B4 1467 aa8.55□□□□□ -1.04
ATXN3-231ENST00000554994 DNMBPQ6XZF7 1577 aa8.54□□□□□ -1.04
ATXN3-231ENST00000554994 SYNJ2O15056 1496 aa8.54□□□□□ -1.04
ATXN3-231ENST00000554994 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
ATXN3-231ENST00000554994 PTPREP23469 700 aa8.53□□□□□ -1.04
ATXN3-231ENST00000554994 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
ATXN3-231ENST00000554994 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
ATXN3-231ENST00000554994 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
ATXN3-231ENST00000554994 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-231ENST00000554994 A0A0G2JS52 829 aa8.52□□□□□ -1.05
ATXN3-231ENST00000554994 RGS20O76081 388 aa8.51□□□□□ -1.05
ATXN3-231ENST00000554994 DISP3Q9P2K9 1392 aa8.5□□□□□ -1.05
ATXN3-231ENST00000554994 MAGI1Q96QZ7 1491 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-231ENST00000554994 ABCC8Q09428 1581 aa8.49□□□□□ -1.05
ATXN3-231ENST00000554994 BHMG1C9JSJ3 638 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-231ENST00000554994 FOSBP53539 338 aa8.49□□□□□ -1.05
ATXN3-231ENST00000554994 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
ATXN3-231ENST00000554994 ZBED2Q9BTP6 218 aa8.49□□□□□ -1.05
ATXN3-231ENST00000554994 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
ATXN3-231ENST00000554994 CHGAP10645 457 aaKnown RBP8.48□□□□□ -1.05
ATXN3-231ENST00000554994 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
ATXN3-231ENST00000554994 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
ATXN3-231ENST00000554994 ABCC10Q5T3U5 1492 aa8.48□□□□□ -1.05
ATXN3-231ENST00000554994 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
ATXN3-231ENST00000554994 SOGA1O94964 1423 aa8.46□□□□□ -1.05
ATXN3-231ENST00000554994 TOP2AP11388 1531 aaKnown RBP8.46□□□□□ -1.05
ATXN3-231ENST00000554994 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
ATXN3-231ENST00000554994 DIP2BQ9P265 1576 aa8.46□□□□□ -1.06
ATXN3-231ENST00000554994 CEP170Q5SW79 1584 aa8.45□□□□□ -1.06
ATXN3-231ENST00000554994 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
ATXN3-231ENST00000554994 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
ATXN3-231ENST00000554994 EVI5O60447 810 aa8.44□□□□□ -1.06
ATXN3-231ENST00000554994 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
ATXN3-231ENST00000554994 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
ATXN3-231ENST00000554994 CRISPLD2Q9H0B8 497 aa8.43□□□□□ -1.06
ATXN3-231ENST00000554994 Q6ZNB5 142 aa8.42□□□□□ -1.06
ATXN3-231ENST00000554994 ANKK1Q8NFD2 765 aa8.41□□□□□ -1.06
ATXN3-231ENST00000554994 BCAMP50895 628 aa8.4□□□□□ -1.06
ATXN3-231ENST00000554994 NKX1-1Q15270 411 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-231ENST00000554994 PROX2Q3B8N5 592 aa8.4□□□□□ -1.06
ATXN3-231ENST00000554994 CCDC88BA6NC98 1476 aa8.39□□□□□ -1.07
ATXN3-231ENST00000554994 FGD5Q6ZNL6 1462 aa8.39□□□□□ -1.07
ATXN3-231ENST00000554994 PDE4AP27815 886 aa8.39□□□□□ -1.07
ATXN3-231ENST00000554994 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
ATXN3-231ENST00000554994 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-231ENST00000554994 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
ATXN3-231ENST00000554994 PBRM1Q86U86 1689 aa8.38□□□□□ -1.07
ATXN3-231ENST00000554994 WDR97A6NE52 1622 aa8.38□□□□□ -1.07
ATXN3-231ENST00000554994 MAPKBP1O60336 1514 aa8.38□□□□□ -1.07
ATXN3-231ENST00000554994 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
ATXN3-231ENST00000554994 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
ATXN3-231ENST00000554994 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
ATXN3-231ENST00000554994 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
ATXN3-231ENST00000554994 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
ATXN3-231ENST00000554994 ITGBL1O95965 494 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-231ENST00000554994 COL9A1P20849 921 aa8.35□□□□□ -1.07
ATXN3-231ENST00000554994 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
ATXN3-231ENST00000554994 SHROOM2Q13796 1616 aa8.35□□□□□ -1.07
ATXN3-231ENST00000554994 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
ATXN3-231ENST00000554994 PRG4Q92954 1404 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-231ENST00000554994 COL17A1Q9UMD9 1497 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-231ENST00000554994 ADCY10Q96PN6 1610 aa8.33□□□□□ -1.08
ATXN3-231ENST00000554994 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
ATXN3-231ENST00000554994 NUP160Q12769 1436 aa8.33□□□□□ -1.08
ATXN3-231ENST00000554994 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
ATXN3-231ENST00000554994 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
ATXN3-231ENST00000554994 KCNC4Q03721 635 aa8.32□□□□□ -1.08
ATXN3-231ENST00000554994 WBP1LQ9NX94 342 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms