RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	TOP2B	Q02880	1626 aa		11.03	□□□□□ -0.64
TAF1D-222	ENST00000546088	BIVM-ERCC5	R4GMW8	1640 aa		11.02	□□□□□ -0.64
TAF1D-222	ENST00000546088	EIF4G3	O43432	1585 aa	Known RBP	11.02	□□□□□ -0.65
TAF1D-222	ENST00000546088	KCTD12	Q96CX2	325 aa	Known RBP	11.01	□□□□□ -0.65
TAF1D-222	ENST00000546088	PPP1R37	O75864	691 aa		11.01	□□□□□ -0.65
TAF1D-222	ENST00000546088	PPP4R3B	Q5MIZ7	849 aa		11.01	□□□□□ -0.65
TAF1D-222	ENST00000546088	ECM2	O94769	699 aa	Predicted RBP	11	□□□□□ -0.65
TAF1D-222	ENST00000546088	STAC3	Q96MF2	364 aa		10.99	□□□□□ -0.65
TAF1D-222	ENST00000546088	FOXK1	P85037	733 aa		10.98	□□□□□ -0.65
TAF1D-222	ENST00000546088	WDR97	A6NE52	1622 aa		10.97	□□□□□ -0.65
TAF1D-222	ENST00000546088	PLPP6	Q8IY26	295 aa		10.96	□□□□□ -0.65
TAF1D-222	ENST00000546088	TBC1D12	O60347	775 aa		10.95	□□□□□ -0.66
TAF1D-222	ENST00000546088	RGS20	O76081	388 aa		10.95	□□□□□ -0.66
TAF1D-222	ENST00000546088	KCNH8	Q96L42	1107 aa		10.94	□□□□□ -0.66
TAF1D-222	ENST00000546088	ABCA10	Q8WWZ4	1543 aa		10.94	□□□□□ -0.66
TAF1D-222	ENST00000546088	RGL2	O15211	777 aa		10.93	□□□□□ -0.66
TAF1D-222	ENST00000546088	IFFO2	Q5TF58	517 aa		10.93	□□□□□ -0.66
TAF1D-222	ENST00000546088	GPHN	Q9NQX3	736 aa	Predicted RBP	10.93	□□□□□ -0.66
TAF1D-222	ENST00000546088	GAPVD1	Q14C86	1478 aa		10.93	□□□□□ -0.66
TAF1D-222	ENST00000546088	KCNK17	Q96T54	332 aa		10.92	□□□□□ -0.66
TAF1D-222	ENST00000546088	PBRM1	Q86U86	1689 aa		10.91	□□□□□ -0.66
TAF1D-222	ENST00000546088	SNAPC4	Q5SXM2	1469 aa		10.91	□□□□□ -0.66
TAF1D-222	ENST00000546088	VPS9D1	Q9Y2B5	631 aa		10.91	□□□□□ -0.66
TAF1D-222	ENST00000546088	ABCA5	Q8WWZ7	1642 aa		10.9	□□□□□ -0.66
TAF1D-222	ENST00000546088	CHD1	O14646	1710 aa		10.89	□□□□□ -0.67
TAF1D-222	ENST00000546088	DSG2	Q14126	1118 aa		10.89	□□□□□ -0.67
TAF1D-222	ENST00000546088	GRIN2B	Q13224	1484 aa		10.89	□□□□□ -0.67
TAF1D-222	ENST00000546088	PTPN5	P54829	565 aa		10.88	□□□□□ -0.67
TAF1D-222	ENST00000546088	SLC4A5	Q9BY07	1137 aa		10.88	□□□□□ -0.67
TAF1D-222	ENST00000546088	PKD2	Q13563	968 aa		10.87	□□□□□ -0.67
TAF1D-222	ENST00000546088	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.87	□□□□□ -0.67
TAF1D-222	ENST00000546088	RUSC2	Q8N2Y8	1516 aa		10.86	□□□□□ -0.67
TAF1D-222	ENST00000546088	IRX2	Q9BZI1	471 aa	Predicted RBP	10.84	□□□□□ -0.67
TAF1D-222	ENST00000546088	BCL2L12	Q9HB09	334 aa		10.84	□□□□□ -0.67
TAF1D-222	ENST00000546088	KIF27	Q86VH2	1401 aa		10.83	□□□□□ -0.68
TAF1D-222	ENST00000546088	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.83	□□□□□ -0.68
TAF1D-222	ENST00000546088	THSD4	Q6ZMP0	1018 aa		10.83	□□□□□ -0.68
TAF1D-222	ENST00000546088	OXER1	Q8TDS5	423 aa		10.83	□□□□□ -0.68
TAF1D-222	ENST00000546088	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.82	□□□□□ -0.68
TAF1D-222	ENST00000546088	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.82	□□□□□ -0.68
TAF1D-222	ENST00000546088		A0A0G2JS52	829 aa		10.81	□□□□□ -0.68
TAF1D-222	ENST00000546088	SYNJ2	O15056	1496 aa		10.81	□□□□□ -0.68
TAF1D-222	ENST00000546088	ZNF454	Q8N9F8	522 aa		10.81	□□□□□ -0.68
TAF1D-222	ENST00000546088	ADAMTS12	P58397	1594 aa		10.8	□□□□□ -0.68
TAF1D-222	ENST00000546088	ERICH3	Q5RHP9	1530 aa		10.8	□□□□□ -0.68
TAF1D-222	ENST00000546088	IGF1R	P08069	1367 aa		10.79	□□□□□ -0.68
TAF1D-222	ENST00000546088	FHAD1	B1AJZ9	1412 aa		10.77	□□□□□ -0.68
TAF1D-222	ENST00000546088	GRIN2A	Q12879	1464 aa		10.77	□□□□□ -0.69
TAF1D-222	ENST00000546088	GOLGA8CP	A6NN73	597 aa		10.76	□□□□□ -0.69
TAF1D-222	ENST00000546088	PTPRE	P23469	700 aa		10.76	□□□□□ -0.69
TAF1D-222	ENST00000546088	FOSB	P53539	338 aa		10.76	□□□□□ -0.69
TAF1D-222	ENST00000546088	WNT2B	Q93097	391 aa		10.76	□□□□□ -0.69
TAF1D-222	ENST00000546088	ZBED2	Q9BTP6	218 aa		10.76	□□□□□ -0.69
TAF1D-222	ENST00000546088	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
TAF1D-222	ENST00000546088	MRPL50	Q8N5N7	158 aa	Known RBP	10.75	□□□□□ -0.69
TAF1D-222	ENST00000546088	CARMIL1	Q5VZK9	1371 aa		10.74	□□□□□ -0.69
TAF1D-222	ENST00000546088	HS6ST3	Q8IZP7	471 aa		10.74	□□□□□ -0.69
TAF1D-222	ENST00000546088	CEP170	Q5SW79	1584 aa		10.73	□□□□□ -0.69
TAF1D-222	ENST00000546088	CUL7	Q14999	1698 aa		10.72	□□□□□ -0.69
TAF1D-222	ENST00000546088	NBPF3	Q9H094	633 aa		10.71	□□□□□ -0.69
TAF1D-222	ENST00000546088	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.71	□□□□□ -0.69
TAF1D-222	ENST00000546088	CLASP1	Q7Z460	1538 aa		10.7	□□□□□ -0.7
TAF1D-222	ENST00000546088	CRISPLD2	Q9H0B8	497 aa		10.7	□□□□□ -0.7
TAF1D-222	ENST00000546088	JPH4	Q96JJ6	628 aa		10.7	□□□□□ -0.7
TAF1D-222	ENST00000546088	RIMBP3C	A6NJZ7	1639 aa		10.69	□□□□□ -0.7
TAF1D-222	ENST00000546088	RIMBP3B	A6NNM3	1639 aa		10.69	□□□□□ -0.7
TAF1D-222	ENST00000546088	RIMBP3	Q9UFD9	1639 aa		10.69	□□□□□ -0.7
TAF1D-222	ENST00000546088	ARHGEF11	O15085	1522 aa		10.68	□□□□□ -0.7
TAF1D-222	ENST00000546088	NUP160	Q12769	1436 aa		10.68	□□□□□ -0.7
TAF1D-222	ENST00000546088	PPP1R15B	Q5SWA1	713 aa		10.68	□□□□□ -0.7
TAF1D-222	ENST00000546088	ZDHHC16	Q969W1	377 aa		10.67	□□□□□ -0.7
TAF1D-222	ENST00000546088	RAPGEF2	Q9Y4G8	1499 aa		10.66	□□□□□ -0.7
TAF1D-222	ENST00000546088	ERCC6L2	Q5T890	1561 aa		10.66	□□□□□ -0.7
TAF1D-222	ENST00000546088	CYB5RL	Q6IPT4	315 aa		10.66	□□□□□ -0.7
TAF1D-222	ENST00000546088	ADAM33	Q9BZ11	813 aa		10.66	□□□□□ -0.7
TAF1D-222	ENST00000546088	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.65	□□□□□ -0.7
TAF1D-222	ENST00000546088	ITGBL1	O95965	494 aa	Predicted RBP	10.65	□□□□□ -0.7
TAF1D-222	ENST00000546088	RANGAP1	P46060	587 aa	Predicted RBP	10.65	□□□□□ -0.7
TAF1D-222	ENST00000546088	PRX	Q9BXM0	1461 aa		10.63	□□□□□ -0.71
TAF1D-222	ENST00000546088	EVI5	O60447	810 aa		10.63	□□□□□ -0.71
TAF1D-222	ENST00000546088	RYDEN	Q9NUL5	291 aa	Known RBP	10.62	□□□□□ -0.71
TAF1D-222	ENST00000546088	ARAP1	Q96P48	1450 aa		10.61	□□□□□ -0.71
TAF1D-222	ENST00000546088	EEA1	Q15075	1411 aa		10.61	□□□□□ -0.71
TAF1D-222	ENST00000546088	PRG4	Q92954	1404 aa	Predicted RBP	10.61	□□□□□ -0.71
TAF1D-222	ENST00000546088	RABGEF1	Q9UJ41	708 aa		10.61	□□□□□ -0.71
TAF1D-222	ENST00000546088	KIAA0586	Q9BVV6	1533 aa		10.6	□□□□□ -0.71
TAF1D-222	ENST00000546088	PDE4A	P27815	886 aa		10.6	□□□□□ -0.71
TAF1D-222	ENST00000546088	ANKK1	Q8NFD2	765 aa		10.6	□□□□□ -0.71
TAF1D-222	ENST00000546088	PPP1R3G	B7ZBB8	358 aa		10.59	□□□□□ -0.71
TAF1D-222	ENST00000546088	SHROOM2	Q13796	1616 aa		10.59	□□□□□ -0.71
TAF1D-222	ENST00000546088	IQGAP2	Q13576	1575 aa		10.58	□□□□□ -0.72
TAF1D-222	ENST00000546088	CHGA	P10645	457 aa	Known RBP	10.58	□□□□□ -0.72
TAF1D-222	ENST00000546088	NKX1-1	Q15270	411 aa	Predicted RBP	10.58	□□□□□ -0.72
TAF1D-222	ENST00000546088	NCKAP5L	Q9HCH0	1330 aa		10.58	□□□□□ -0.72
TAF1D-222	ENST00000546088	CTTNBP2	Q8WZ74	1663 aa		10.58	□□□□□ -0.72
TAF1D-222	ENST00000546088	UBTF	P17480	764 aa	Known RBP	10.57	□□□□□ -0.72
TAF1D-222	ENST00000546088		Q6ZNB5	142 aa		10.57	□□□□□ -0.72
TAF1D-222	ENST00000546088	NYAP1	Q6ZVC0	841 aa		10.56	□□□□□ -0.72
TAF1D-222	ENST00000546088	P3H3	Q8IVL6	736 aa		10.56	□□□□□ -0.72
TAF1D-222	ENST00000546088	LAPTM4B	Q86VI4	370 aa		10.55	□□□□□ -0.72

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