RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 MIA2Q96PC5 1412 aa11.78□□□□□ -0.52
CACNA1C-225ENST00000480911 CNTLNQ9NXG0 1405 aa11.78□□□□□ -0.52
CACNA1C-225ENST00000480911 NLRP13Q86W25 1043 aa11.78□□□□□ -0.52
CACNA1C-225ENST00000480911 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
CACNA1C-225ENST00000480911 KIF15Q9NS87 1388 aa11.77□□□□□ -0.53
CACNA1C-225ENST00000480911 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
CACNA1C-225ENST00000480911 G3V3G9 751 aa11.77□□□□□ -0.53
CACNA1C-225ENST00000480911 DEKP35659 375 aaKnown RBP11.77□□□□□ -0.53
CACNA1C-225ENST00000480911 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
CACNA1C-225ENST00000480911 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
CACNA1C-225ENST00000480911 DRC7Q8IY82 874 aa11.76□□□□□ -0.53
CACNA1C-225ENST00000480911 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-225ENST00000480911 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
CACNA1C-225ENST00000480911 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-225ENST00000480911 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
CACNA1C-225ENST00000480911 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
CACNA1C-225ENST00000480911 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
CACNA1C-225ENST00000480911 KNSTRNQ9Y448 316 aa11.74□□□□□ -0.53
CACNA1C-225ENST00000480911 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
CACNA1C-225ENST00000480911 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
CACNA1C-225ENST00000480911 TMF1P82094 1093 aa11.74□□□□□ -0.53
CACNA1C-225ENST00000480911 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
CACNA1C-225ENST00000480911 TNNT3P45378 269 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-225ENST00000480911 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-225ENST00000480911 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-225ENST00000480911 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-225ENST00000480911 CCDC7Q96M83 1385 aa11.71□□□□□ -0.53
CACNA1C-225ENST00000480911 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.53
CACNA1C-225ENST00000480911 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.54
CACNA1C-225ENST00000480911 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.54
CACNA1C-225ENST00000480911 FHOD3Q2V2M9 1422 aa11.71□□□□□ -0.54
CACNA1C-225ENST00000480911 EIF3AQ14152 1382 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-225ENST00000480911 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 B4GALNT3Q6L9W6 998 aa11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-225ENST00000480911 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
CACNA1C-225ENST00000480911 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
CACNA1C-225ENST00000480911 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-225ENST00000480911 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
CACNA1C-225ENST00000480911 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-225ENST00000480911 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
CACNA1C-225ENST00000480911 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-225ENST00000480911 PRDM2Q13029 1718 aa11.66□□□□□ -0.54
CACNA1C-225ENST00000480911 SMG6Q86US8 1419 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-225ENST00000480911 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-225ENST00000480911 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-225ENST00000480911 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 PRG4Q92954 1404 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 CREBRFQ8IUR6 639 aa11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 NESP48681 1621 aa11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 GOLGA6L1Q8N7Z2 621 aa11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 ARID3AQ99856 593 aa11.64□□□□□ -0.55
CACNA1C-225ENST00000480911 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
CACNA1C-225ENST00000480911 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-225ENST00000480911 FTSJ3Q8IY81 847 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-225ENST00000480911 BIVM-ERCC5R4GMW8 1640 aa11.63□□□□□ -0.55
CACNA1C-225ENST00000480911 PSME1Q06323 249 aa11.63□□□□□ -0.55
CACNA1C-225ENST00000480911 PKD2Q13563 968 aa11.62□□□□□ -0.55
CACNA1C-225ENST00000480911 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-225ENST00000480911 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-225ENST00000480911 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-225ENST00000480911 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-225ENST00000480911 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-225ENST00000480911 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
CACNA1C-225ENST00000480911 NUTM2FA1L443 756 aa11.61□□□□□ -0.55
CACNA1C-225ENST00000480911 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
CACNA1C-225ENST00000480911 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
CACNA1C-225ENST00000480911 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
CACNA1C-225ENST00000480911 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
CACNA1C-225ENST00000480911 USP47Q96K76 1375 aa11.6□□□□□ -0.55
CACNA1C-225ENST00000480911 RRP1P56182 461 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-225ENST00000480911 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
CACNA1C-225ENST00000480911 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
CACNA1C-225ENST00000480911 NUP155O75694 1391 aa11.59□□□□□ -0.55
CACNA1C-225ENST00000480911 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
CACNA1C-225ENST00000480911 ABCA10Q8WWZ4 1543 aa11.58□□□□□ -0.56
CACNA1C-225ENST00000480911 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
CACNA1C-225ENST00000480911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.561e-7■■■■■ 115.4
CACNA1C-225ENST00000480911 LAMC3Q9Y6N6 1575 aa11.57□□□□□ -0.56
CACNA1C-225ENST00000480911 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
CACNA1C-225ENST00000480911 RWDD1Q9H446 243 aaPredicted RBP11.57□□□□□ -0.56
CACNA1C-225ENST00000480911 MSNP26038 577 aaKnown RBP11.57□□□□□ -0.56
CACNA1C-225ENST00000480911 MARCH6O60337 910 aa11.57□□□□□ -0.56
CACNA1C-225ENST00000480911 PDE4AP27815 886 aa11.57□□□□□ -0.56
CACNA1C-225ENST00000480911 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 SYTL4Q96C24 671 aaPredicted RBP11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 NAIPQ13075 1403 aa11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 AMPHP49418 695 aa11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 TAF7LQ5H9L4 462 aa11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 HMGB2P26583 209 aaKnown RBP11.56□□□□□ -0.56
CACNA1C-225ENST00000480911 PLEKHH2Q8IVE3 1493 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms