RNA–Protein interactions for RNA: ENST00000478687.5

VRK2-209, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,021 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-209ENST00000478687 FOXK1P85037 733 aa10.14□□□□□ -0.79
VRK2-209ENST00000478687 IFFO2Q5TF58 517 aa10.14□□□□□ -0.79
VRK2-209ENST00000478687 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
VRK2-209ENST00000478687 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
VRK2-209ENST00000478687 RGS20O76081 388 aa10.11□□□□□ -0.79
VRK2-209ENST00000478687 PPP4R3BQ5MIZ7 849 aa10.11□□□□□ -0.79
VRK2-209ENST00000478687 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
VRK2-209ENST00000478687 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
VRK2-209ENST00000478687 VPS9D1Q9Y2B5 631 aa10.09□□□□□ -0.79
VRK2-209ENST00000478687 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
VRK2-209ENST00000478687 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
VRK2-209ENST00000478687 SNAPC4Q5SXM2 1469 aa10.07□□□□□ -0.8
VRK2-209ENST00000478687 RGL2O15211 777 aa10.07□□□□□ -0.8
VRK2-209ENST00000478687 SOGA1O94964 1423 aa10.07□□□□□ -0.8
VRK2-209ENST00000478687 SLC4A5Q9BY07 1137 aa10.06□□□□□ -0.8
VRK2-209ENST00000478687 CLASP1Q7Z460 1538 aa10.06□□□□□ -0.8
VRK2-209ENST00000478687 BHMG1C9JSJ3 638 aaPredicted RBP10.05□□□□□ -0.8
VRK2-209ENST00000478687 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
VRK2-209ENST00000478687 DSG2Q14126 1118 aa10.05□□□□□ -0.8
VRK2-209ENST00000478687 CHMP7Q8WUX9 453 aaPredicted RBP10.05□□□□□ -0.8
VRK2-209ENST00000478687 KCNK17Q96T54 332 aa10.05□□□□□ -0.8
VRK2-209ENST00000478687 PKD2Q13563 968 aa10.04□□□□□ -0.8
VRK2-209ENST00000478687 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
VRK2-209ENST00000478687 SYNJ1O43426 1573 aa10.02□□□□□ -0.81
VRK2-209ENST00000478687 A0A0G2JS52 829 aa10.02□□□□□ -0.81
VRK2-209ENST00000478687 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
VRK2-209ENST00000478687 PTPN5P54829 565 aa10.01□□□□□ -0.81
VRK2-209ENST00000478687 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
VRK2-209ENST00000478687 MAGI1Q96QZ7 1491 aaPredicted RBP10□□□□□ -0.81
VRK2-209ENST00000478687 BCL2L12Q9HB09 334 aa10□□□□□ -0.81
VRK2-209ENST00000478687 GRIN2BQ13224 1484 aa9.99□□□□□ -0.81
VRK2-209ENST00000478687 TBC1D12O60347 775 aa9.99□□□□□ -0.81
VRK2-209ENST00000478687 WDR97A6NE52 1622 aa9.99□□□□□ -0.81
VRK2-209ENST00000478687 SYNJ2O15056 1496 aa9.98□□□□□ -0.81
VRK2-209ENST00000478687 CUX1P39880 1505 aa9.98□□□□□ -0.81
VRK2-209ENST00000478687 STAC3Q96MF2 364 aa9.98□□□□□ -0.81
VRK2-209ENST00000478687 IRX2Q9BZI1 471 aaPredicted RBP9.98□□□□□ -0.81
VRK2-209ENST00000478687 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
VRK2-209ENST00000478687 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
VRK2-209ENST00000478687 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.82
VRK2-209ENST00000478687 FOSBP53539 338 aa9.95□□□□□ -0.82
VRK2-209ENST00000478687 PBRM1Q86U86 1689 aa9.94□□□□□ -0.82
VRK2-209ENST00000478687 ZNF454Q8N9F8 522 aa9.93□□□□□ -0.82
VRK2-209ENST00000478687 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
VRK2-209ENST00000478687 CRISPLD2Q9H0B8 497 aa9.9□□□□□ -0.82
VRK2-209ENST00000478687 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
VRK2-209ENST00000478687 ABCA5Q8WWZ7 1642 aa9.89□□□□□ -0.83
VRK2-209ENST00000478687 WNT2BQ93097 391 aa9.89□□□□□ -0.83
VRK2-209ENST00000478687 ABCA10Q8WWZ4 1543 aa9.88□□□□□ -0.83
VRK2-209ENST00000478687 ITGBL1O95965 494 aaPredicted RBP9.88□□□□□ -0.83
VRK2-209ENST00000478687 PTPREP23469 700 aa9.88□□□□□ -0.83
VRK2-209ENST00000478687 HS6ST3Q8IZP7 471 aa9.88□□□□□ -0.83
VRK2-209ENST00000478687 GRIN2AQ12879 1464 aa9.87□□□□□ -0.83
VRK2-209ENST00000478687 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
VRK2-209ENST00000478687 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
VRK2-209ENST00000478687 CEP170Q5SW79 1584 aa9.86□□□□□ -0.83
VRK2-209ENST00000478687 MRPL50Q8N5N7 158 aaKnown RBP9.86□□□□□ -0.83
VRK2-209ENST00000478687 ADAM33Q9BZ11 813 aa9.85□□□□□ -0.83
VRK2-209ENST00000478687 ADAMTS12P58397 1594 aa9.84□□□□□ -0.83
VRK2-209ENST00000478687 NUP160Q12769 1436 aa9.83□□□□□ -0.84
VRK2-209ENST00000478687 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
VRK2-209ENST00000478687 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
VRK2-209ENST00000478687 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
VRK2-209ENST00000478687 ZDHHC16Q969W1 377 aa9.81□□□□□ -0.84
VRK2-209ENST00000478687 SHROOM2Q13796 1616 aa9.81□□□□□ -0.84
VRK2-209ENST00000478687 WRNQ14191 1432 aaPredicted RBP eCLIP9.81□□□□□ -0.84
VRK2-209ENST00000478687 KIF13AQ9H1H9 1805 aa9.8□□□□□ -0.84
VRK2-209ENST00000478687 FHAD1B1AJZ9 1412 aa9.8□□□□□ -0.84
VRK2-209ENST00000478687 NCKAP5LQ9HCH0 1330 aa9.8□□□□□ -0.84
VRK2-209ENST00000478687 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
VRK2-209ENST00000478687 PRG4Q92954 1404 aaPredicted RBP9.78□□□□□ -0.84
VRK2-209ENST00000478687 PPP1R3GB7ZBB8 358 aa9.77□□□□□ -0.85
VRK2-209ENST00000478687 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
VRK2-209ENST00000478687 EVI5O60447 810 aa9.77□□□□□ -0.85
VRK2-209ENST00000478687 RABGEF1Q9UJ41 708 aa9.77□□□□□ -0.85
VRK2-209ENST00000478687 TOP2BQ02880 1626 aa9.76□□□□□ -0.85
VRK2-209ENST00000478687 LCE2BO14633 110 aa9.76□□□□□ -0.85
VRK2-209ENST00000478687 BIVM-ERCC5R4GMW8 1640 aa9.75□□□□□ -0.85
VRK2-209ENST00000478687 FAM69CQ0P6D2 419 aa9.75□□□□□ -0.85
VRK2-209ENST00000478687 ERICH3Q5RHP9 1530 aa9.75□□□□□ -0.85
VRK2-209ENST00000478687 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
VRK2-209ENST00000478687 ANKK1Q8NFD2 765 aa9.74□□□□□ -0.85
VRK2-209ENST00000478687 SOWAHBA6NEL2 793 aa9.73□□□□□ -0.85
VRK2-209ENST00000478687 COL9A1P20849 921 aa9.73□□□□□ -0.85
VRK2-209ENST00000478687 ABCC10Q5T3U5 1492 aa9.72□□□□□ -0.85
VRK2-209ENST00000478687 BCAMP50895 628 aa9.72□□□□□ -0.85
VRK2-209ENST00000478687 Q6ZNB5 142 aa9.72□□□□□ -0.85
VRK2-209ENST00000478687 LAPTM4BQ86VI4 370 aa9.72□□□□□ -0.85
VRK2-209ENST00000478687 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
VRK2-209ENST00000478687 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
VRK2-209ENST00000478687 RUSC2Q8N2Y8 1516 aa9.71□□□□□ -0.86
VRK2-209ENST00000478687 DIP2BQ9P265 1576 aa9.71□□□□□ -0.86
VRK2-209ENST00000478687 MAPKBP1O60336 1514 aa9.7□□□□□ -0.86
VRK2-209ENST00000478687 ADCY10Q96PN6 1610 aa9.7□□□□□ -0.86
VRK2-209ENST00000478687 PDE4AP27815 886 aa9.69□□□□□ -0.86
VRK2-209ENST00000478687 KDM6BO15054 1643 aa9.68□□□□□ -0.86
VRK2-209ENST00000478687 MFSD10Q14728 455 aa9.68□□□□□ -0.86
VRK2-209ENST00000478687 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
VRK2-209ENST00000478687 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
VRK2-209ENST00000478687 WBP1LQ9NX94 342 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms