RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 PSEN2P49810 448 aa14.08□□□□□ -0.16
CHD6-207ENST00000476641 DMRTA1Q5VZB9 504 aa14.08□□□□□ -0.16
CHD6-207ENST00000476641 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
CHD6-207ENST00000476641 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
CHD6-207ENST00000476641 SOGA1O94964 1423 aa14.07□□□□□ -0.16
CHD6-207ENST00000476641 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
CHD6-207ENST00000476641 TK2O00142 265 aa14.06□□□□□ -0.16
CHD6-207ENST00000476641 TBC1D12O60347 775 aa14.06□□□□□ -0.16
CHD6-207ENST00000476641 PLA2G2EQ9NZK7 142 aa14.06□□□□□ -0.16
CHD6-207ENST00000476641 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
CHD6-207ENST00000476641 HRO43593 1189 aa14.02□□□□□ -0.17
CHD6-207ENST00000476641 KCNK17Q96T54 332 aa13.98□□□□□ -0.17
CHD6-207ENST00000476641 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.17
CHD6-207ENST00000476641 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
CHD6-207ENST00000476641 UPF1Q92900 1129 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHD6-207ENST00000476641 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
CHD6-207ENST00000476641 STAC3Q96MF2 364 aa13.96□□□□□ -0.17
CHD6-207ENST00000476641 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
CHD6-207ENST00000476641 KCTD12Q96CX2 325 aaKnown RBP13.95□□□□□ -0.18
CHD6-207ENST00000476641 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
CHD6-207ENST00000476641 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
CHD6-207ENST00000476641 CRISPLD2Q9H0B8 497 aa13.91□□□□□ -0.18
CHD6-207ENST00000476641 RYDENQ9NUL5 291 aaKnown RBP13.91□□□□□ -0.18
CHD6-207ENST00000476641 CHD1O14646 1710 aa13.9□□□□□ -0.18
CHD6-207ENST00000476641 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
CHD6-207ENST00000476641 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
CHD6-207ENST00000476641 WDR97A6NE52 1622 aa13.9□□□□□ -0.19
CHD6-207ENST00000476641 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.19
CHD6-207ENST00000476641 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
CHD6-207ENST00000476641 PPP1R15BQ5SWA1 713 aa13.89□□□□□ -0.19
CHD6-207ENST00000476641 VPS9D1Q9Y2B5 631 aa13.88□□□□□ -0.19
CHD6-207ENST00000476641 RIMBP3CA6NJZ7 1639 aa13.87□□□□□ -0.19
CHD6-207ENST00000476641 RIMBP3BA6NNM3 1639 aa13.87□□□□□ -0.19
CHD6-207ENST00000476641 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
CHD6-207ENST00000476641 RIMBP3Q9UFD9 1639 aa13.87□□□□□ -0.19
CHD6-207ENST00000476641 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
CHD6-207ENST00000476641 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
CHD6-207ENST00000476641 BCL2L12Q9HB09 334 aa13.85□□□□□ -0.19
CHD6-207ENST00000476641 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
CHD6-207ENST00000476641 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
CHD6-207ENST00000476641 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
CHD6-207ENST00000476641 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
CHD6-207ENST00000476641 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
CHD6-207ENST00000476641 FOSBP53539 338 aa13.81□□□□□ -0.2
CHD6-207ENST00000476641 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
CHD6-207ENST00000476641 PDE4AP27815 886 aa13.8□□□□□ -0.2
CHD6-207ENST00000476641 PTPN5P54829 565 aa13.8□□□□□ -0.2
CHD6-207ENST00000476641 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
CHD6-207ENST00000476641 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
CHD6-207ENST00000476641 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
CHD6-207ENST00000476641 PTPREP23469 700 aa13.78□□□□□ -0.2
CHD6-207ENST00000476641 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
CHD6-207ENST00000476641 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
CHD6-207ENST00000476641 EVI5O60447 810 aa13.75□□□□□ -0.21
CHD6-207ENST00000476641 JPH4Q96JJ6 628 aa13.75□□□□□ -0.21
CHD6-207ENST00000476641 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
CHD6-207ENST00000476641 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
CHD6-207ENST00000476641 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
CHD6-207ENST00000476641 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
CHD6-207ENST00000476641 LARP6Q9BRS8 491 aaKnown RBP13.73□□□□□ -0.21
CHD6-207ENST00000476641 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
CHD6-207ENST00000476641 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
CHD6-207ENST00000476641 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
CHD6-207ENST00000476641 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
CHD6-207ENST00000476641 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
CHD6-207ENST00000476641 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
CHD6-207ENST00000476641 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
CHD6-207ENST00000476641 MRPL50Q8N5N7 158 aaKnown RBP13.7□□□□□ -0.22
CHD6-207ENST00000476641 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
CHD6-207ENST00000476641 WNT2BQ93097 391 aa13.69□□□□□ -0.22
CHD6-207ENST00000476641 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
CHD6-207ENST00000476641 NUP160Q12769 1436 aa13.68□□□□□ -0.22
CHD6-207ENST00000476641 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
CHD6-207ENST00000476641 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
CHD6-207ENST00000476641 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
CHD6-207ENST00000476641 IGF1RP08069 1367 aa13.65□□□□□ -0.22
CHD6-207ENST00000476641 MFSD10Q14728 455 aa13.64□□□□□ -0.23
CHD6-207ENST00000476641 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
CHD6-207ENST00000476641 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
CHD6-207ENST00000476641 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
CHD6-207ENST00000476641 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
CHD6-207ENST00000476641 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.24
CHD6-207ENST00000476641 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
CHD6-207ENST00000476641 RGS20O76081 388 aa13.57□□□□□ -0.24
CHD6-207ENST00000476641 PROX2Q3B8N5 592 aa13.56□□□□□ -0.24
CHD6-207ENST00000476641 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
CHD6-207ENST00000476641 SHROOM2Q13796 1616 aa13.55□□□□□ -0.24
CHD6-207ENST00000476641 A0A0G2JS52 829 aa13.55□□□□□ -0.24
CHD6-207ENST00000476641 RABGEF1Q9UJ41 708 aa13.55□□□□□ -0.24
CHD6-207ENST00000476641 COL9A1P20849 921 aa13.54□□□□□ -0.24
CHD6-207ENST00000476641 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
CHD6-207ENST00000476641 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
CHD6-207ENST00000476641 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
CHD6-207ENST00000476641 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
CHD6-207ENST00000476641 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
CHD6-207ENST00000476641 PHF14O94880 888 aa13.5□□□□□ -0.25
CHD6-207ENST00000476641 CUL7Q14999 1698 aa13.49□□□□□ -0.25
CHD6-207ENST00000476641 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
CHD6-207ENST00000476641 BCAMP50895 628 aa13.47□□□□□ -0.25
CHD6-207ENST00000476641 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms