RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 NUDT7P0C024 238 aa10.4□□□□□ -0.74
TVP23C-202ENST00000419890 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
TVP23C-202ENST00000419890 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
TVP23C-202ENST00000419890 BIVM-ERCC5R4GMW8 1640 aa10.38□□□□□ -0.75
TVP23C-202ENST00000419890 SLC34A2O95436 690 aa10.38□□□□□ -0.75
TVP23C-202ENST00000419890 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
TVP23C-202ENST00000419890 STK25O00506 426 aa10.37□□□□□ -0.75
TVP23C-202ENST00000419890 PBX2P40425 430 aa10.37□□□□□ -0.75
TVP23C-202ENST00000419890 VPS8Q8N3P4 1428 aa10.37□□□□□ -0.75
TVP23C-202ENST00000419890 CHMP7Q8WUX9 453 aaPredicted RBP10.37□□□□□ -0.75
TVP23C-202ENST00000419890 LHX6Q9UPM6 363 aa10.37□□□□□ -0.75
TVP23C-202ENST00000419890 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
TVP23C-202ENST00000419890 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
TVP23C-202ENST00000419890 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
TVP23C-202ENST00000419890 GAPVD1Q14C86 1478 aa10.36□□□□□ -0.75
TVP23C-202ENST00000419890 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
TVP23C-202ENST00000419890 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
TVP23C-202ENST00000419890 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
TVP23C-202ENST00000419890 CHD1O14646 1710 aa10.33□□□□□ -0.76
TVP23C-202ENST00000419890 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
TVP23C-202ENST00000419890 ERICH3Q5RHP9 1530 aa10.32□□□□□ -0.76
TVP23C-202ENST00000419890 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
TVP23C-202ENST00000419890 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
TVP23C-202ENST00000419890 ABCA5Q8WWZ7 1642 aa10.31□□□□□ -0.76
TVP23C-202ENST00000419890 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
TVP23C-202ENST00000419890 CLIP1P30622 1438 aa10.3□□□□□ -0.76
TVP23C-202ENST00000419890 RGL2O15211 777 aa10.29□□□□□ -0.76
TVP23C-202ENST00000419890 PPP1R37O75864 691 aa10.29□□□□□ -0.76
TVP23C-202ENST00000419890 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
TVP23C-202ENST00000419890 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
TVP23C-202ENST00000419890 PKD2Q13563 968 aa10.27□□□□□ -0.77
TVP23C-202ENST00000419890 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
TVP23C-202ENST00000419890 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
TVP23C-202ENST00000419890 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
TVP23C-202ENST00000419890 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
TVP23C-202ENST00000419890 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
TVP23C-202ENST00000419890 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
TVP23C-202ENST00000419890 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
TVP23C-202ENST00000419890 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
TVP23C-202ENST00000419890 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
TVP23C-202ENST00000419890 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
TVP23C-202ENST00000419890 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 IGF1RP08069 1367 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
TVP23C-202ENST00000419890 HRO43593 1189 aa10.21□□□□□ -0.77
TVP23C-202ENST00000419890 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
TVP23C-202ENST00000419890 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
TVP23C-202ENST00000419890 CLASP1Q7Z460 1538 aa10.2□□□□□ -0.78
TVP23C-202ENST00000419890 RRBP1Q9P2E9 1410 aaKnown RBP10.2□□□□□ -0.78
TVP23C-202ENST00000419890 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
TVP23C-202ENST00000419890 TK2O00142 265 aa10.18□□□□□ -0.78
TVP23C-202ENST00000419890 PSEN2P49810 448 aa10.18□□□□□ -0.78
TVP23C-202ENST00000419890 FOXK1P85037 733 aa10.18□□□□□ -0.78
TVP23C-202ENST00000419890 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
TVP23C-202ENST00000419890 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
TVP23C-202ENST00000419890 DHX57Q6P158 1386 aaKnown RBP10.17□□□□□ -0.78
TVP23C-202ENST00000419890 CEP170Q5SW79 1584 aa10.16□□□□□ -0.78
TVP23C-202ENST00000419890 MAP3K1Q13233 1512 aa10.16□□□□□ -0.78
TVP23C-202ENST00000419890 NUP160Q12769 1436 aa10.16□□□□□ -0.78
TVP23C-202ENST00000419890 CARMIL1Q5VZK9 1371 aa10.15□□□□□ -0.78
TVP23C-202ENST00000419890 PLPP6Q8IY26 295 aa10.15□□□□□ -0.78
TVP23C-202ENST00000419890 ARAP1Q96P48 1450 aa10.15□□□□□ -0.78
TVP23C-202ENST00000419890 JPH4Q96JJ6 628 aa10.14□□□□□ -0.79
TVP23C-202ENST00000419890 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
TVP23C-202ENST00000419890 CUL7Q14999 1698 aa10.13□□□□□ -0.79
TVP23C-202ENST00000419890 DSG2Q14126 1118 aa10.12□□□□□ -0.79
TVP23C-202ENST00000419890 PRG4Q92954 1404 aaPredicted RBP10.09□□□□□ -0.79
TVP23C-202ENST00000419890 PPP4R3BQ5MIZ7 849 aa10.09□□□□□ -0.79
TVP23C-202ENST00000419890 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
TVP23C-202ENST00000419890 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
TVP23C-202ENST00000419890 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
TVP23C-202ENST00000419890 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
TVP23C-202ENST00000419890 SUPT16HQ9Y5B9 1047 aaKnown RBP10.07□□□□□ -0.8
TVP23C-202ENST00000419890 SHROOM2Q13796 1616 aa10.07□□□□□ -0.8
TVP23C-202ENST00000419890 HS6ST3Q8IZP7 471 aa10.06□□□□□ -0.8
TVP23C-202ENST00000419890 TBC1D12O60347 775 aa10.05□□□□□ -0.8
TVP23C-202ENST00000419890 KCNK17Q96T54 332 aa10.05□□□□□ -0.8
TVP23C-202ENST00000419890 CCNB3Q8WWL7 1395 aa10.04□□□□□ -0.8
TVP23C-202ENST00000419890 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
TVP23C-202ENST00000419890 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
TVP23C-202ENST00000419890 CFAP43Q8NDM7 1665 aa10.03□□□□□ -0.8
TVP23C-202ENST00000419890 TIAM1Q13009 1591 aa10.02□□□□□ -0.81
TVP23C-202ENST00000419890 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
TVP23C-202ENST00000419890 MAPKBP1O60336 1514 aa10.02□□□□□ -0.81
TVP23C-202ENST00000419890 CARMIL2Q6F5E8 1435 aa10□□□□□ -0.81
TVP23C-202ENST00000419890 ARHGAP35Q9NRY4 1499 aa10□□□□□ -0.81
TVP23C-202ENST00000419890 IQGAP2Q13576 1575 aa10□□□□□ -0.81
TVP23C-202ENST00000419890 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
TVP23C-202ENST00000419890 BCL2L12Q9HB09 334 aa9.99□□□□□ -0.81
TVP23C-202ENST00000419890 PTPRGP23470 1445 aa9.99□□□□□ -0.81
TVP23C-202ENST00000419890 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
TVP23C-202ENST00000419890 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
TVP23C-202ENST00000419890 CRISPLD2Q9H0B8 497 aa9.98□□□□□ -0.81
TVP23C-202ENST00000419890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.98□□□□□ -0.81
TVP23C-202ENST00000419890 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
TVP23C-202ENST00000419890 ANP32EQ9BTT0 268 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms