RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
RFC1-201ENST00000349703 WDR78Q5VTH9 848 aa7.85□□□□□ -1.15
RFC1-201ENST00000349703 RDH13Q8NBN7 331 aa7.85□□□□□ -1.15
RFC1-201ENST00000349703 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
RFC1-201ENST00000349703 WRNQ14191 1432 aaPredicted RBP eCLIP7.84□□□□□ -1.15
RFC1-201ENST00000349703 XPCQ01831 940 aaPredicted RBP7.84□□□□□ -1.15
RFC1-201ENST00000349703 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
RFC1-201ENST00000349703 FOSBP53539 338 aa7.84□□□□□ -1.16
RFC1-201ENST00000349703 RBM33Q96EV2 1170 aaKnown RBP7.84□□□□□ -1.16
RFC1-201ENST00000349703 ANP32CO43423 234 aa7.83□□□□□ -1.16
RFC1-201ENST00000349703 SEMA3FQ13275 785 aa7.83□□□□□ -1.16
RFC1-201ENST00000349703 KCNV2Q8TDN2 545 aa7.83□□□□□ -1.16
RFC1-201ENST00000349703 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
RFC1-201ENST00000349703 TNIKQ9UKE5 1360 aa7.82□□□□□ -1.16
RFC1-201ENST00000349703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.82□□□□□ -1.16
RFC1-201ENST00000349703 MAP3K7O43318 606 aa7.81□□□□□ -1.16
RFC1-201ENST00000349703 CCDC85CA6NKD9 419 aa7.8□□□□□ -1.16
RFC1-201ENST00000349703 RBM26Q5T8P6 1007 aaKnown RBP7.8□□□□□ -1.16
RFC1-201ENST00000349703 PMFBP1Q8TBY8 1022 aa7.8□□□□□ -1.16
RFC1-201ENST00000349703 PCDHB13Q9Y5F0 798 aa7.8□□□□□ -1.16
RFC1-201ENST00000349703 PSEN1P49768 467 aa7.8□□□□□ -1.16
RFC1-201ENST00000349703 GORABQ5T7V8 394 aa7.79□□□□□ -1.16
RFC1-201ENST00000349703 ARHGEF1Q92888 912 aaKnown RBP7.79□□□□□ -1.16
RFC1-201ENST00000349703 CEP89Q96ST8 783 aa7.79□□□□□ -1.16
RFC1-201ENST00000349703 SPINK5Q9NQ38 1064 aaPredicted RBP7.79□□□□□ -1.16
RFC1-201ENST00000349703 PPP1R12AO14974 1030 aaPredicted RBP7.79□□□□□ -1.16
RFC1-201ENST00000349703 MDM2Q00987 491 aaPredicted RBP7.79□□□□□ -1.16
RFC1-201ENST00000349703 PROSER2Q86WR7 435 aaPredicted RBP7.78□□□□□ -1.16
RFC1-201ENST00000349703 PDE4DQ08499 809 aa7.78□□□□□ -1.16
RFC1-201ENST00000349703 VPS37DQ86XT2 251 aa7.78□□□□□ -1.16
RFC1-201ENST00000349703 ANKRD62A6NC57 917 aa7.78□□□□□ -1.16
RFC1-201ENST00000349703 CT47B1P0C2W7 299 aaPredicted RBP7.78□□□□□ -1.16
RFC1-201ENST00000349703 SRPK2P78362 688 aaKnown RBP7.78□□□□□ -1.16
RFC1-201ENST00000349703 GOLGA3Q08378 1498 aa7.77□□□□□ -1.17
RFC1-201ENST00000349703 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
RFC1-201ENST00000349703 PIK3R5Q8WYR1 880 aa7.77□□□□□ -1.17
RFC1-201ENST00000349703 HINFPQ9BQA5 517 aa7.77□□□□□ -1.17
RFC1-201ENST00000349703 CNGA1P29973 690 aa7.76□□□□□ -1.17
RFC1-201ENST00000349703 ANP32AP39687 249 aaKnown RBP7.76□□□□□ -1.17
RFC1-201ENST00000349703 CPLX3Q8WVH0 158 aa7.76□□□□□ -1.17
RFC1-201ENST00000349703 PCDHB8Q9UN66 801 aa7.75□□□□□ -1.17
RFC1-201ENST00000349703 SCRIBQ14160 1630 aa7.75□□□□□ -1.17
RFC1-201ENST00000349703 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
RFC1-201ENST00000349703 RAB15P59190 212 aa7.75□□□□□ -1.17
RFC1-201ENST00000349703 BRD3Q15059 726 aa7.75□□□□□ -1.17
RFC1-201ENST00000349703 LARP1Q6PKG0 1096 aaKnown RBP7.75□□□□□ -1.17
RFC1-201ENST00000349703 BCL2L13Q9BXK5 485 aa7.75□□□□□ -1.17
RFC1-201ENST00000349703 TCERG1O14776 1098 aaKnown RBP7.74□□□□□ -1.17
RFC1-201ENST00000349703 ERICH6BQ5W0A0 696 aa7.74□□□□□ -1.17
RFC1-201ENST00000349703 TRERF1Q96PN7 1200 aa7.74□□□□□ -1.17
RFC1-201ENST00000349703 GTF2F1P35269 517 aaKnown RBP eCLIP7.73□□□□□ -1.17
RFC1-201ENST00000349703 ENOX2Q16206 610 aaKnown RBP7.73□□□□□ -1.17
RFC1-201ENST00000349703 DDX12PQ92771 950 aa7.73□□□□□ -1.17
RFC1-201ENST00000349703 GOLGA8CPA6NN73 597 aa7.73□□□□□ -1.17
RFC1-201ENST00000349703 ZBBXA8MT70 800 aa7.73□□□□□ -1.17
RFC1-201ENST00000349703 ATP2B2Q01814 1243 aa7.73□□□□□ -1.17
RFC1-201ENST00000349703 TSR1Q2NL82 804 aaKnown RBP7.73□□□□□ -1.17
RFC1-201ENST00000349703 HELBQ8NG08 1087 aaPredicted RBP7.73□□□□□ -1.17
RFC1-201ENST00000349703 CHMP3Q9Y3E7 222 aa7.73□□□□□ -1.17
RFC1-201ENST00000349703 CTHP32929 405 aa7.72□□□□□ -1.17
RFC1-201ENST00000349703 FBXW10Q5XX13 1052 aa7.72□□□□□ -1.17
RFC1-201ENST00000349703 FAM177BA6PVY3 158 aa7.72□□□□□ -1.17
RFC1-201ENST00000349703 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
RFC1-201ENST00000349703 NEUROD4Q9HD90 331 aa7.71□□□□□ -1.18
RFC1-201ENST00000349703 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
RFC1-201ENST00000349703 DPYSL4O14531 572 aa7.7□□□□□ -1.18
RFC1-201ENST00000349703 IPO9Q96P70 1041 aaKnown RBP7.7□□□□□ -1.18
RFC1-201ENST00000349703 IVNS1ABPQ9Y6Y0 642 aa7.7□□□□□ -1.18
RFC1-201ENST00000349703 CLIP1P30622 1438 aa7.7□□□□□ -1.18
RFC1-201ENST00000349703 SEC24BO95487 1268 aa7.7□□□□□ -1.18
RFC1-201ENST00000349703 ANKRD13AQ8IZ07 590 aa7.7□□□□□ -1.18
RFC1-201ENST00000349703 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
RFC1-201ENST00000349703 DIXDC1Q155Q3 683 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 GLYCTKQ8IVS8 523 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 RBM42Q9BTD8 480 aaKnown RBP7.69□□□□□ -1.18
RFC1-201ENST00000349703 CCSER2Q9H7U1 834 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 DEKP35659 375 aaKnown RBP7.69□□□□□ -1.18
RFC1-201ENST00000349703 CCER2I3L3R5 266 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 CLCN1P35523 988 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 FCHSD2O94868 740 aa7.69□□□□□ -1.18
RFC1-201ENST00000349703 SAFB2Q14151 953 aaKnown RBP eCLIP7.68□□□□□ -1.18
RFC1-201ENST00000349703 L1TD1Q5T7N2 865 aaKnown RBP7.68□□□□□ -1.18
RFC1-201ENST00000349703 CEP164Q9UPV0 1460 aa7.68□□□□□ -1.18
RFC1-201ENST00000349703 hCG_2014768A0A024R1R8 64 aa7.68□□□□□ -1.18
RFC1-201ENST00000349703 WDR43Q15061 677 aaKnown RBP eCLIP7.68□□□□□ -1.18
RFC1-201ENST00000349703 TANGO6Q9C0B7 1094 aa7.68□□□□□ -1.18
RFC1-201ENST00000349703 CACNB1Q02641 598 aaPredicted RBP7.68□□□□□ -1.18
RFC1-201ENST00000349703 PLIN1O60240 522 aa7.67□□□□□ -1.18
RFC1-201ENST00000349703 GTPBP6O43824 516 aaPredicted RBP7.67□□□□□ -1.18
RFC1-201ENST00000349703 TRIM34Q9BYJ4 488 aa7.67□□□□□ -1.18
RFC1-201ENST00000349703 GDPD2Q9HCC8 539 aa7.67□□□□□ -1.18
RFC1-201ENST00000349703 TCEAL9Q9UHQ7 104 aa7.67□□□□□ -1.18
RFC1-201ENST00000349703 NAP1L4Q99733 375 aaKnown RBP7.66□□□□□ -1.18
RFC1-201ENST00000349703 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
RFC1-201ENST00000349703 NOP58Q9Y2X3 529 aaKnown RBP7.66□□□□□ -1.18
RFC1-201ENST00000349703 GIPC2Q8TF65 315 aa7.66□□□□□ -1.18
RFC1-201ENST00000349703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.66□□□□□ -1.183e-7■■■■□ 21.4
RFC1-201ENST00000349703 PCSK2P16519 638 aa7.66□□□□□ -1.18
RFC1-201ENST00000349703 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms