RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 SLC52A1Q9NWF4 448 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 TPD52L2O43399 206 aaKnown RBP4.45□□□□□ -1.7
DMD-201ENST00000288447 BRD1O95696 1058 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 GTF2E1P29083 439 aaPredicted RBP4.45□□□□□ -1.7
DMD-201ENST00000288447 PPP4CP60510 307 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 MTA3Q9BTC8 594 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 APLP1P51693 650 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 AXDND1Q5T1B0 1012 aaPredicted RBP4.45□□□□□ -1.7
DMD-201ENST00000288447 MIER1Q8N108 512 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 SPOCK2Q92563 424 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 TSPAN18Q96SJ8 248 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 SLC24A3Q9HC58 644 aa4.45□□□□□ -1.7
DMD-201ENST00000288447 CFAP65Q6ZU64 1925 aaKnown RBP4.44□□□□□ -1.7
DMD-201ENST00000288447 CLGNO14967 610 aa4.44□□□□□ -1.7
DMD-201ENST00000288447 HELBQ8NG08 1087 aaPredicted RBP4.44□□□□□ -1.7
DMD-201ENST00000288447 HIRIP3Q9BW71 556 aaPredicted RBP4.44□□□□□ -1.7
DMD-201ENST00000288447 CALRP27797 417 aaKnown RBP4.44□□□□□ -1.7
DMD-201ENST00000288447 PSEN1P49768 467 aa4.44□□□□□ -1.7
DMD-201ENST00000288447 PCGF5Q86SE9 256 aa4.44□□□□□ -1.7
DMD-201ENST00000288447 CCDC136Q96JN2 1154 aa4.44□□□□□ -1.7
DMD-201ENST00000288447 PPM1GO15355 546 aaPredicted RBP4.43□□□□□ -1.7
DMD-201ENST00000288447 MKRN4PQ13434 485 aaPredicted RBP4.43□□□□□ -1.7
DMD-201ENST00000288447 CEP126Q9P2H0 1117 aa4.43□□□□□ -1.7
DMD-201ENST00000288447 KDM4AO75164 1064 aa4.43□□□□□ -1.7
DMD-201ENST00000288447 PPFIA4O75335 1185 aa4.43□□□□□ -1.7
DMD-201ENST00000288447 TSR1Q2NL82 804 aaKnown RBP4.43□□□□□ -1.7
DMD-201ENST00000288447 TRIM44Q96DX7 344 aaPredicted RBP4.43□□□□□ -1.7
DMD-201ENST00000288447 CIZ1Q9ULV3 898 aaPredicted RBP4.43□□□□□ -1.7
DMD-201ENST00000288447 SALL2Q9Y467 1007 aaPredicted RBP4.43□□□□□ -1.7
DMD-201ENST00000288447 USP35Q9P2H5 1018 aa4.43□□□□□ -1.7
DMD-201ENST00000288447 RINLQ6ZS11 566 aa4.42□□□□□ -1.7
DMD-201ENST00000288447 PRDM4Q9UKN5 801 aa4.42□□□□□ -1.7
DMD-201ENST00000288447 RALBP1Q15311 655 aa4.42□□□□□ -1.7
DMD-201ENST00000288447 OSCARQ8IYS5 282 aa4.42□□□□□ -1.7
DMD-201ENST00000288447 ARID4AP29374 1257 aaPredicted RBP4.42□□□□□ -1.7
DMD-201ENST00000288447 LONRF3Q496Y0 759 aa4.42□□□□□ -1.7
DMD-201ENST00000288447 GLIPR1L2Q4G1C9 344 aa4.42□□□□□ -1.7
DMD-201ENST00000288447 PNISRQ8TF01 805 aaKnown RBP4.42□□□□□ -1.7
DMD-201ENST00000288447 PPARGC1BQ86YN6 1023 aaKnown RBP4.41□□□□□ -1.7
DMD-201ENST00000288447 SREK1Q8WXA9 508 aaKnown RBP4.41□□□□□ -1.7
DMD-201ENST00000288447 BSDC1Q9NW68 430 aaPredicted RBP4.41□□□□□ -1.7
DMD-201ENST00000288447 CACNB1Q02641 598 aaPredicted RBP4.41□□□□□ -1.7
DMD-201ENST00000288447 UBXN4Q92575 508 aa4.41□□□□□ -1.7
DMD-201ENST00000288447 USTQ9Y2C2 406 aa4.41□□□□□ -1.7
DMD-201ENST00000288447 ARID3CA6NKF2 412 aa4.41□□□□□ -1.7
DMD-201ENST00000288447 MARCH6O60337 910 aa4.41□□□□□ -1.7
DMD-201ENST00000288447 TXNDC2Q86VQ3 553 aa4.41□□□□□ -1.7
DMD-201ENST00000288447 RNF39Q9H2S5 420 aa4.41□□□□□ -1.7
DMD-201ENST00000288447 NOP9Q86U38 636 aaKnown RBP4.4□□□□□ -1.7
DMD-201ENST00000288447 ZBTB12Q9Y330 459 aaPredicted RBP4.4□□□□□ -1.7
DMD-201ENST00000288447 EIF4G1Q04637 1599 aaKnown RBP4.4□□□□□ -1.71
DMD-201ENST00000288447 C1QBPQ07021 282 aaKnown RBP4.4□□□□□ -1.71
DMD-201ENST00000288447 NKX1-1Q15270 411 aaPredicted RBP4.4□□□□□ -1.71
DMD-201ENST00000288447 AK7Q96M32 723 aa4.4□□□□□ -1.71
DMD-201ENST00000288447 SGIP1Q9BQI5 828 aa4.4□□□□□ -1.71
DMD-201ENST00000288447 GNEQ9Y223 722 aaKnown RBP4.4□□□□□ -1.71
DMD-201ENST00000288447 C11orf95C9JLR9 678 aaPredicted RBP4.4□□□□□ -1.71
DMD-201ENST00000288447 IRX6P78412 446 aaPredicted RBP4.4□□□□□ -1.71
DMD-201ENST00000288447 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
DMD-201ENST00000288447 KRBA2Q6ZNG9 492 aa4.4□□□□□ -1.71
DMD-201ENST00000288447 SND1Q7KZF4 910 aaKnown RBP eCLIP4.4□□□□□ -1.71
DMD-201ENST00000288447 RETREG2Q8NC44 543 aa4.4□□□□□ -1.71
DMD-201ENST00000288447 MORC4Q8TE76 937 aa4.4□□□□□ -1.71
DMD-201ENST00000288447 ZCCHC6Q5VYS8 1495 aaKnown RBP4.39□□□□□ -1.71
DMD-201ENST00000288447 NRDCO43847 1150 aa4.39□□□□□ -1.71
DMD-201ENST00000288447 TBC1D10BQ4KMP7 808 aaPredicted RBP4.39□□□□□ -1.71
DMD-201ENST00000288447 PABPN1Q86U42 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
DMD-201ENST00000288447 STAC3Q96MF2 364 aa4.39□□□□□ -1.71
DMD-201ENST00000288447 CUEDC1Q9NWM3 386 aaPredicted RBP4.39□□□□□ -1.71
DMD-201ENST00000288447 SYNRGQ9UMZ2 1314 aa4.39□□□□□ -1.71
DMD-201ENST00000288447 VIL1P09327 827 aaKnown RBP4.39□□□□□ -1.71
DMD-201ENST00000288447 COL6A1P12109 1028 aa4.39□□□□□ -1.71
DMD-201ENST00000288447 ANKRD23Q86SG2 305 aa4.39□□□□□ -1.71
DMD-201ENST00000288447 ARHGEF1Q92888 912 aaKnown RBP4.39□□□□□ -1.71
DMD-201ENST00000288447 ACIN1Q9UKV3 1341 aaKnown RBP4.39□□□□□ -1.71
DMD-201ENST00000288447 SOCS7O14512 581 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 PRDM10Q9NQV6 1147 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 KIAA1522Q9P206 1035 aaPredicted RBP4.38□□□□□ -1.71
DMD-201ENST00000288447 OTUD6BQ8N6M0 293 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 RELTQ969Z4 430 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 SCYL1Q96KG9 808 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 CLEC11AQ9Y240 323 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 PLSCR2Q9NRY7 297 aa4.38□□□□□ -1.71
DMD-201ENST00000288447 RIOK3O14730 519 aaKnown RBP4.37□□□□□ -1.71
DMD-201ENST00000288447 SLC20A2Q08357 652 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 GJC2Q5T442 439 aaPredicted RBP4.37□□□□□ -1.71
DMD-201ENST00000288447 CSPP1Q1MSJ5 1256 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 UVSSAQ2YD98 709 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 ARMC5Q96C12 935 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 CCDC85AQ96PX6 553 aaPredicted RBP4.37□□□□□ -1.71
DMD-201ENST00000288447 CARD10Q9BWT7 1032 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 NBPF9Q3BBW0 867 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 GORABQ5T7V8 394 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 KDM4CQ9H3R0 1056 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 SH3BP1Q9Y3L3 701 aa4.37□□□□□ -1.71
DMD-201ENST00000288447 ZRANB2O95218 330 aaKnown RBP eCLIP4.36□□□□□ -1.71
DMD-201ENST00000288447 XPCQ01831 940 aaPredicted RBP4.36□□□□□ -1.71
DMD-201ENST00000288447 MIGA1Q8NAN2 632 aa4.36□□□□□ -1.71
DMD-201ENST00000288447 SLC39A13Q96H72 371 aa4.36□□□□□ -1.71
DMD-201ENST00000288447 TBC1D12O60347 775 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms