RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 CHIC1Q5VXU3 224 aa7.27□□□□□ -1.24
DMD-201ENST00000288447 AEBP2Q6ZN18 517 aaPredicted RBP7.27□□□□□ -1.25
DMD-201ENST00000288447 SLC24A1O60721 1099 aa6.87□□□□□ -1.31
DMD-201ENST00000288447 TTBK1Q5TCY1 1321 aaPredicted RBP6.49□□□□□ -1.37
DMD-201ENST00000288447 DAXXQ9UER7 740 aaPredicted RBP6.46□□□□□ -1.38
DMD-201ENST00000288447 PHF23Q9BUL5 403 aaPredicted RBP6.41□□□□□ -1.38
DMD-201ENST00000288447 APLP2Q06481 763 aa6.32□□□□□ -1.4
DMD-201ENST00000288447 MYT1Q01538 1121 aa6.31□□□□□ -1.4
DMD-201ENST00000288447 NCBP3Q53F19 620 aaKnown RBP6.31□□□□□ -1.4
DMD-201ENST00000288447 SENP3Q9H4L4 574 aaPredicted RBP6.19□□□□□ -1.42
DMD-201ENST00000288447 PELP1Q8IZL8 1130 aaKnown RBP6.15□□□□□ -1.42
DMD-201ENST00000288447 ARXQ96QS3 562 aa6.15□□□□□ -1.43
DMD-201ENST00000288447 AMER1Q5JTC6 1135 aaPredicted RBP6.11□□□□□ -1.43
DMD-201ENST00000288447 PLPPR3Q6T4P5 718 aa6.07□□□□□ -1.44
DMD-201ENST00000288447 ERICH6Q7L0X2 663 aa5.97□□□□□ -1.45
DMD-201ENST00000288447 RTN4Q9NQC3 1192 aaKnown RBP5.95□□□□□ -1.46
DMD-201ENST00000288447 PRKCSHP14314 528 aaPredicted RBP5.93□□□□□ -1.46
DMD-201ENST00000288447 EHMT2Q96KQ7 1210 aa5.79□□□□□ -1.48
DMD-201ENST00000288447 ADRA2BP18089 450 aa5.78□□□□□ -1.48
DMD-201ENST00000288447 CSRNP3Q8WYN3 585 aa5.77□□□□□ -1.49
DMD-201ENST00000288447 KCNA4P22459 653 aa5.77□□□□□ -1.49
DMD-201ENST00000288447 HOMEZQ8IX15 550 aa5.75□□□□□ -1.49
DMD-201ENST00000288447 FOXD1Q16676 465 aa5.72□□□□□ -1.49
DMD-201ENST00000288447 TIMELESSQ9UNS1 1208 aa5.71□□□□□ -1.5
DMD-201ENST00000288447 TAOK2Q9UL54 1235 aa5.68□□□□□ -1.5
DMD-201ENST00000288447 PPP6R1Q9UPN7 881 aa5.68□□□□□ -1.5
DMD-201ENST00000288447 BCANQ96GW7 911 aa5.65□□□□□ -1.5
DMD-201ENST00000288447 FBXO3Q9UK99 471 aa5.62□□□□□ -1.51
DMD-201ENST00000288447 RANGAP1P46060 587 aaPredicted RBP5.61□□□□□ -1.51
DMD-201ENST00000288447 PIAS4Q8N2W9 510 aaPredicted RBP5.58□□□□□ -1.52
DMD-201ENST00000288447 PLCB2Q00722 1185 aa5.52□□□□□ -1.53
DMD-201ENST00000288447 GTF3C3Q9Y5Q9 886 aa5.51□□□□□ -1.53
DMD-201ENST00000288447 EIF5BO60841 1220 aaKnown RBP5.49□□□□□ -1.53
DMD-201ENST00000288447 VSIG10Q8N0Z9 540 aa5.49□□□□□ -1.53
DMD-201ENST00000288447 TULP1O00294 542 aaPredicted RBP5.48□□□□□ -1.53
DMD-201ENST00000288447 KLHL34Q8N239 644 aa5.46□□□□□ -1.54
DMD-201ENST00000288447 TMEM132AQ24JP5 1023 aa5.46□□□□□ -1.54
DMD-201ENST00000288447 PPP4R3CPQ6ZMV5 832 aa5.41□□□□□ -1.54
DMD-201ENST00000288447 TPRNQ4KMQ1 711 aa5.38□□□□□ -1.55
DMD-201ENST00000288447 NPM2Q86SE8 214 aaKnown RBP5.37□□□□□ -1.55
DMD-201ENST00000288447 SLC4A1APQ9BWU0 796 aaKnown RBP5.36□□□□□ -1.55
DMD-201ENST00000288447 PODXL2Q9NZ53 605 aa5.36□□□□□ -1.55
DMD-201ENST00000288447 CNKSR2Q8WXI2 1034 aa5.31□□□□□ -1.56
DMD-201ENST00000288447 DNAJC5Q9H3Z4 198 aa5.28□□□□□ -1.56
DMD-201ENST00000288447 UBE2Q2Q8WVN8 375 aa5.27□□□□□ -1.57
DMD-201ENST00000288447 CDK11AQ9UQ88 783 aaPredicted RBP5.26□□□□□ -1.57
DMD-201ENST00000288447 SCAF1Q9H7N4 1312 aaKnown RBP5.26□□□□□ -1.57
DMD-201ENST00000288447 HRCP23327 699 aa5.25□□□□□ -1.57
DMD-201ENST00000288447 DCAF8L2P0C7V8 631 aa5.25□□□□□ -1.57
DMD-201ENST00000288447 SHROOM4Q9ULL8 1493 aa5.24□□□□□ -1.57
DMD-201ENST00000288447 BCL11AQ9H165 835 aa5.23□□□□□ -1.57
DMD-201ENST00000288447 DNAJC5BQ9UF47 199 aa5.23□□□□□ -1.57
DMD-201ENST00000288447 HMGB1P09429 215 aaKnown RBP5.22□□□□□ -1.57
DMD-201ENST00000288447 TRIM26Q12899 539 aaPredicted RBP5.21□□□□□ -1.58
DMD-201ENST00000288447 NPM3O75607 178 aaKnown RBP5.21□□□□□ -1.58
DMD-201ENST00000288447 LOC105371045A0A1W2PR82 267 aa5.2□□□□□ -1.58
DMD-201ENST00000288447 PUS7Q96PZ0 661 aaKnown RBP5.2□□□□□ -1.58
DMD-201ENST00000288447 POTEDQ86YR6 584 aa5.2□□□□□ -1.58
DMD-201ENST00000288447 KDM2AQ9Y2K7 1162 aa5.19□□□□□ -1.58
DMD-201ENST00000288447 MSH5O43196 834 aa5.18□□□□□ -1.58
DMD-201ENST00000288447 MAPK8IP2Q13387 824 aaPredicted RBP5.18□□□□□ -1.58
DMD-201ENST00000288447 ZBTB22O15209 634 aa5.18□□□□□ -1.58
DMD-201ENST00000288447 ARID3AQ99856 593 aa5.18□□□□□ -1.58
DMD-201ENST00000288447 C14orf37Q86TY3 774 aa5.18□□□□□ -1.58
DMD-201ENST00000288447 HAP1P54257 671 aaPredicted RBP5.17□□□□□ -1.58
DMD-201ENST00000288447 PLEKHG5O94827 1062 aa5.16□□□□□ -1.58
DMD-201ENST00000288447 PDIA4P13667 645 aaKnown RBP5.15□□□□□ -1.59
DMD-201ENST00000288447 SAMD1Q6SPF0 538 aaPredicted RBP5.14□□□□□ -1.59
DMD-201ENST00000288447 DCAF8L1A6NGE4 600 aa5.14□□□□□ -1.59
DMD-201ENST00000288447 HSP90B1P14625 803 aaKnown RBP5.12□□□□□ -1.59
DMD-201ENST00000288447 BRD2P25440 801 aaKnown RBP5.12□□□□□ -1.59
DMD-201ENST00000288447 FAM9AQ8IZU1 332 aaPredicted RBP5.11□□□□□ -1.59
DMD-201ENST00000288447 TAF7LQ5H9L4 462 aa5.09□□□□□ -1.59
DMD-201ENST00000288447 RSPH4AQ5TD94 716 aa5.09□□□□□ -1.59
DMD-201ENST00000288447 BCCIPQ9P287 314 aaKnown RBP eCLIP5.06□□□□□ -1.6
DMD-201ENST00000288447 UBTFP17480 764 aaKnown RBP5.05□□□□□ -1.6
DMD-201ENST00000288447 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
DMD-201ENST00000288447 CCDC9Q9Y3X0 531 aaKnown RBP5.03□□□□□ -1.6
DMD-201ENST00000288447 BBXQ8WY36 941 aaPredicted RBP5.03□□□□□ -1.6
DMD-201ENST00000288447 CDK11BP21127 795 aaKnown RBP5□□□□□ -1.61
DMD-201ENST00000288447 NPM1P06748 294 aaKnown RBP eCLIP5□□□□□ -1.61
DMD-201ENST00000288447 FOXD4L1Q9NU39 408 aa5□□□□□ -1.61
DMD-201ENST00000288447 IGSF3O75054 1194 aa4.99□□□□□ -1.61
DMD-201ENST00000288447 FBLN2P98095 1184 aa4.98□□□□□ -1.61
DMD-201ENST00000288447 NEFLP07196 543 aa4.97□□□□□ -1.61
DMD-201ENST00000288447 FGD1P98174 961 aa4.97□□□□□ -1.61
DMD-201ENST00000288447 RGS22Q8NE09 1264 aa4.97□□□□□ -1.61
DMD-201ENST00000288447 CC2D2BQ6DHV5 1058 aa4.97□□□□□ -1.61
DMD-201ENST00000288447 RSPH6AQ9H0K4 717 aa4.97□□□□□ -1.61
DMD-201ENST00000288447 PDE4CQ08493 712 aa4.96□□□□□ -1.62
DMD-201ENST00000288447 CHRM1P11229 460 aaPredicted RBP4.95□□□□□ -1.62
DMD-201ENST00000288447 RNF216Q9NWF9 866 aaPredicted RBP4.94□□□□□ -1.62
DMD-201ENST00000288447 ATXN8OSP0DMR3 200 aa4.93□□□□□ -1.62
DMD-201ENST00000288447 FKBP8Q14318 412 aa4.93□□□□□ -1.62
DMD-201ENST00000288447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.92□□□□□ -1.62
DMD-201ENST00000288447 TICAM2Q86XR7 235 aa4.9□□□□□ -1.62
DMD-201ENST00000288447 TRAIPQ9BWF2 469 aa4.9□□□□□ -1.63
DMD-201ENST00000288447 ZNF326Q5BKZ1 582 aaKnown RBP4.9□□□□□ -1.63
DMD-201ENST00000288447 PKNOX2Q96KN3 472 aa4.9□□□□□ -1.63
DMD-201ENST00000288447 ZMYND15Q9H091 742 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms