RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Irx3P81067 507 aa22.79■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Stard8Q8K031 1019 aa22.79■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Smarca4Q3TKT4 1613 aaKnown RBP22.79■■□□□ 1.24
Pkp4-210ENSMUST00000168631 MecomP14404 1042 aa22.78■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Ipo9Q91YE6 1041 aa22.78■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Ccdc60Q8C4J0 545 aa22.78■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Kif7B7ZNG0 1348 aa22.78■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Erich6bQ9D4S6 220 aa22.77■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Ccdc146E9Q9F7 977 aa22.76■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Dapk1Q80YE7 1442 aa22.76■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Anapc15P60007 132 aa22.76■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Iffo2Q8R2V2 512 aa22.76■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Brpf1B2RRD7 1212 aa22.76■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Zscan10Q3URR7 782 aa22.75■■□□□ 1.23
Pkp4-210ENSMUST00000168631 CgnP59242 1191 aa22.74■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Cc2d2bA0A286YDU8 1405 aa22.74■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Rock1P70335 1354 aa22.73■■□□□ 1.23
Pkp4-210ENSMUST00000168631 GsdmaQ9EST1 446 aa22.73■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Cc2d1aQ8K1A6 943 aa22.72■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Stk31Q99MW1 1018 aa22.72■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Ap3b2Q9JME5 1082 aa22.72■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Chmp3Q9CQ10 224 aa22.72■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Bcl11aQ9QYE3 773 aa22.72■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Nol10Q5RJG1 687 aaKnown RBP22.71■■□□□ 1.23
Pkp4-210ENSMUST00000168631 HdgfP51859 237 aaKnown RBP22.71■■□□□ 1.23
Pkp4-210ENSMUST00000168631 Rpgrip1lQ8CG73 1264 aa22.7■■□□□ 1.22
Pkp4-210ENSMUST00000168631 Soga1E1U8D0 1418 aa22.7■■□□□ 1.22
Pkp4-210ENSMUST00000168631 CrebrfQ8CDG5 640 aaKnown RBP22.67■■□□□ 1.22
Pkp4-210ENSMUST00000168631 Pak3Q61036 559 aa22.65■■□□□ 1.22
Pkp4-210ENSMUST00000168631 Slc4a10Q5DTL9 1118 aa22.64■■□□□ 1.22
Pkp4-210ENSMUST00000168631 Rad54l2Q99NG0 1466 aa22.64■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Pabpn1Q8CCS6 302 aaKnown RBP22.64■■□□□ 1.21
Pkp4-210ENSMUST00000168631 AU015836B2RUM3 263 aa22.64■■□□□ 1.21
Pkp4-210ENSMUST00000168631 G3bp1P97855 465 aaKnown RBP22.64■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Rsph4aQ8BYM7 716 aa22.63■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Pde3bQ61409 1100 aa22.63■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Pde4cQ3UEI1 686 aa22.62■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Cttnbp2B9EJA2 1648 aa22.61■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Eif4g2Q62448 906 aaKnown RBP22.61■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Ralbp1Q62172 648 aa22.59■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Efcab5A0JP43 1406 aa22.58■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Gm21190A0A0G2JGJ6 266 aa22.58■■□□□ 1.21
Pkp4-210ENSMUST00000168631 PtmsQ9D0J8 101 aaKnown RBP22.58■■□□□ 1.21
Pkp4-210ENSMUST00000168631 Q7TT23 1179 aa22.57■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Iqgap2Q3UQ44 1575 aa22.55■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Ccdc30Q8BVF4 654 aa22.55■■□□□ 1.2
Pkp4-210ENSMUST00000168631 SlkO54988 1233 aa22.54■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Map3k5O35099 1380 aa22.54■■□□□ 1.2
Pkp4-210ENSMUST00000168631 ErbinQ80TH2 1402 aa22.53■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Q9D9H8 365 aa22.53■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Puf60Q3UEB3 564 aaKnown RBP22.53■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Naip1Q9QWK5 1403 aa22.52■■□□□ 1.2
Pkp4-210ENSMUST00000168631 Nectin2P32507 530 aa22.51■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Triml2E9PW10 424 aa22.5■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Znf710Q3U288 666 aa22.49■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Shroom4Q1W617 1475 aa22.49■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Rfx1P48377 963 aa22.49■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Pank1Q8K4K6 548 aa22.49■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Eif2s2Q99L45 331 aaKnown RBP22.49■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Trim58Q5NCC9 485 aa22.48■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Atp2b2Q9R0K7 1198 aa22.48■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Slc4a2P13808 1237 aaKnown RBP22.47■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Nutm1Q8BHP2 1126 aa22.47■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Ak7Q9D2H2 614 aa22.46■■□□□ 1.19
Pkp4-210ENSMUST00000168631 Gm973E9Q295 1059 aa22.45■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Ubap1lG3UW59 384 aa22.44■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Usp16Q99LG0 825 aa22.44■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Gsto1O09131 240 aa22.44■■□□□ 1.18
Pkp4-210ENSMUST00000168631 AppP12023 770 aa22.43■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Top2aQ01320 1528 aaKnown RBP22.43■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Mical1Q8VDP3 1048 aa22.43■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Nsd2Q8BVE8 1365 aa22.42■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Adam1bQ8R534 806 aa22.42■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Ylpm1Q9R0I7 1386 aaKnown RBP22.42■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Ankrd36D3Z4K0 1415 aa22.42■■□□□ 1.18
Pkp4-210ENSMUST00000168631 KarsQ99MN1 595 aaKnown RBP22.42■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Cgnl1Q6AW69 1298 aa22.42■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Urb2E9Q7L1 1524 aaKnown RBP22.41■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Apaf1O88879 1249 aa22.41■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Chmp4cQ9D7F7 232 aa22.4■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Ttll5Q8CHB8 1328 aa22.4■■□□□ 1.18
Pkp4-210ENSMUST00000168631 R3hcc1Q8BSI6 488 aa22.4■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Arhgap31A6X8Z5 1425 aa22.39■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Duox2A2AQ99 1517 aa22.39■■□□□ 1.18
Pkp4-210ENSMUST00000168631 Prdm16A2A935 1275 aa22.38■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Atp6v1dP57746 247 aa22.38■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Ncoa2Q61026 1462 aa22.37■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Ift140E9PY46 1464 aa22.37■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Arap1Q4LDD4 1452 aa22.37■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Ric3Q8BPM6 367 aa22.37■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Smarce1O54941 411 aaKnown RBP22.37■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Vps8Q0P5W1 1427 aa22.36■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Dhx9O70133 1380 aaKnown RBP22.36■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Fyb1O35601 819 aa22.36■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Ccer1Q9CQL2 403 aa22.36■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Gpatch11Q3UFS4 262 aa22.35■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Chmp7Q8R1T1 451 aa22.35■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Rbm25B2RY56 838 aaKnown RBP22.35■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Rsph3aQ3UFY4 516 aa22.35■■□□□ 1.17
Pkp4-210ENSMUST00000168631 Filip1lQ6P6L0 1131 aa22.34■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms