RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Plppr3Q7TPB0 716 aa20.57■□□□□ 0.88
Synpo-206ENSMUST00000130360 1700019A02RikA0A087WPV9 146 aa20.57■□□□□ 0.88
Synpo-206ENSMUST00000130360 Grin2bQ01097 1482 aa20.56■□□□□ 0.88
Synpo-206ENSMUST00000130360 Ylpm1Q9R0I7 1386 aaKnown RBP20.56■□□□□ 0.88
Synpo-206ENSMUST00000130360 Slc4a2P13808 1237 aaKnown RBP20.56■□□□□ 0.88
Synpo-206ENSMUST00000130360 Kif3bQ61771 747 aa20.55■□□□□ 0.88
Synpo-206ENSMUST00000130360 Tmco5bQ80X59 307 aa20.54■□□□□ 0.88
Synpo-206ENSMUST00000130360 Plcd4Q8K3R3 807 aa20.54■□□□□ 0.88
Synpo-206ENSMUST00000130360 Sart3Q9JLI8 962 aaKnown RBP20.54■□□□□ 0.88
Synpo-206ENSMUST00000130360 Irx6Q9ER75 438 aa20.54■□□□□ 0.88
Synpo-206ENSMUST00000130360 CenpjQ569L8 1344 aa20.52■□□□□ 0.88
Synpo-206ENSMUST00000130360 SlkO54988 1233 aa20.51■□□□□ 0.87
Synpo-206ENSMUST00000130360 VgfQ0VGU4 617 aa20.51■□□□□ 0.87
Synpo-206ENSMUST00000130360 Rpgrip1lQ8CG73 1264 aa20.51■□□□□ 0.87
Synpo-206ENSMUST00000130360 Plekhg5Q66T02 1073 aa20.51■□□□□ 0.87
Synpo-206ENSMUST00000130360 Tdrd9Q14BI7 1383 aa20.5■□□□□ 0.87
Synpo-206ENSMUST00000130360 Pdcl3Q8BVF2 240 aa20.5■□□□□ 0.87
Synpo-206ENSMUST00000130360 Spag9Q58A65 1321 aaKnown RBP20.5■□□□□ 0.87
Synpo-206ENSMUST00000130360 Pde3bQ61409 1100 aa20.5■□□□□ 0.87
Synpo-206ENSMUST00000130360 Esx1O88933 382 aa20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 Stk26Q99JT2 416 aa20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 Fan1Q69ZT1 1020 aa20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 U2surpQ6NV83 1029 aaKnown RBP20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 Rtf1A2AQ19 715 aaKnown RBP20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 Kif7B7ZNG0 1348 aa20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 PtprkP35822 1457 aa20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 Duox2A2AQ99 1517 aa20.49■□□□□ 0.87
Synpo-206ENSMUST00000130360 Cgnl1Q6AW69 1298 aa20.48■□□□□ 0.87
Synpo-206ENSMUST00000130360 Trim58Q5NCC9 485 aa20.47■□□□□ 0.87
Synpo-206ENSMUST00000130360 Becn1O88597 448 aa20.47■□□□□ 0.87
Synpo-206ENSMUST00000130360 Tsen2Q6P7W5 460 aa20.46■□□□□ 0.87
Synpo-206ENSMUST00000130360 GsdmaQ9EST1 446 aa20.45■□□□□ 0.86
Synpo-206ENSMUST00000130360 AqrQ8CFQ3 1481 aaKnown RBP20.45■□□□□ 0.86
Synpo-206ENSMUST00000130360 Rsph3aQ3UFY4 516 aa20.45■□□□□ 0.86
Synpo-206ENSMUST00000130360 Pak3Q61036 559 aa20.45■□□□□ 0.86
Synpo-206ENSMUST00000130360 Znf330Q922H9 316 aa20.45■□□□□ 0.86
Synpo-206ENSMUST00000130360 Nsd2Q8BVE8 1365 aa20.44■□□□□ 0.86
Synpo-206ENSMUST00000130360 Kif16bB1AVY7 1312 aa20.44■□□□□ 0.86
Synpo-206ENSMUST00000130360 Plekhh1Q80TI1 1356 aa20.43■□□□□ 0.86
Synpo-206ENSMUST00000130360 Arid3cA6PWV5 409 aa20.42■□□□□ 0.86
Synpo-206ENSMUST00000130360 Ak7Q9D2H2 614 aa20.42■□□□□ 0.86
Synpo-206ENSMUST00000130360 Usp40Q8BWR4 1235 aa20.42■□□□□ 0.86
Synpo-206ENSMUST00000130360 NgefQ8CHT1 710 aa20.42■□□□□ 0.86
Synpo-206ENSMUST00000130360 Ush1cQ9ES64 910 aa20.41■□□□□ 0.86
Synpo-206ENSMUST00000130360 Rad54l2Q99NG0 1466 aa20.41■□□□□ 0.86
Synpo-206ENSMUST00000130360 PogzQ8BZH4 1409 aaKnown RBP20.41■□□□□ 0.86
Synpo-206ENSMUST00000130360 Zfp644E9QA22 1323 aa20.41■□□□□ 0.86
Synpo-206ENSMUST00000130360 Myom3A2ABU4 1439 aa20.41■□□□□ 0.86
Synpo-206ENSMUST00000130360 Rsph4aQ8BYM7 716 aa20.4■□□□□ 0.86
Synpo-206ENSMUST00000130360 Smarce1O54941 411 aaKnown RBP20.4■□□□□ 0.86
Synpo-206ENSMUST00000130360 Atl3Q91YH5 541 aa20.4■□□□□ 0.86
Synpo-206ENSMUST00000130360 Ccdc30Q8BVF4 654 aa20.4■□□□□ 0.86
Synpo-206ENSMUST00000130360 Gm973E9Q295 1059 aa20.39■□□□□ 0.86
Synpo-206ENSMUST00000130360 Birc3O08863 600 aa20.39■□□□□ 0.86
Synpo-206ENSMUST00000130360 Atp6v1dP57746 247 aa20.39■□□□□ 0.86
Synpo-206ENSMUST00000130360 Ttll13A4Q9F6 804 aa20.39■□□□□ 0.85
Synpo-206ENSMUST00000130360 Pes1Q9EQ61 584 aaKnown RBP20.39■□□□□ 0.85
Synpo-206ENSMUST00000130360 Ciz1Q8VEH2 845 aa20.39■□□□□ 0.85
Synpo-206ENSMUST00000130360 Naip2Q9QUK4 1447 aa20.39■□□□□ 0.85
Synpo-206ENSMUST00000130360 Jph4Q80WT0 628 aa20.39■□□□□ 0.85
Synpo-206ENSMUST00000130360 TchhA0A0B4J1F9 1599 aa20.38■□□□□ 0.85
Synpo-206ENSMUST00000130360 GorabQ8BRM2 368 aa20.38■□□□□ 0.85
Synpo-206ENSMUST00000130360 Pcmtd1P59913 357 aa20.38■□□□□ 0.85
Synpo-206ENSMUST00000130360 Znf316Q6PGE4 1016 aa20.37■□□□□ 0.85
Synpo-206ENSMUST00000130360 Il16O54824 1322 aa20.37■□□□□ 0.85
Synpo-206ENSMUST00000130360 Gm7298A0A0N4SVU1 1476 aa20.37■□□□□ 0.85
Synpo-206ENSMUST00000130360 Eif2s2Q99L45 331 aaKnown RBP20.37■□□□□ 0.85
Synpo-206ENSMUST00000130360 Rabep1O35551 862 aa20.36■□□□□ 0.85
Synpo-206ENSMUST00000130360 Ipo4Q8VI75 1082 aa20.36■□□□□ 0.85
Synpo-206ENSMUST00000130360 Zfp444Q3TDV8 331 aaKnown RBP20.36■□□□□ 0.85
Synpo-206ENSMUST00000130360 Prdm16A2A935 1275 aa20.35■□□□□ 0.85
Synpo-206ENSMUST00000130360 Calcoco2A2A6M5 331 aa20.35■□□□□ 0.85
Synpo-206ENSMUST00000130360 Znf326O88291 580 aa20.35■□□□□ 0.85
Synpo-206ENSMUST00000130360 Eif4g2Q62448 906 aaKnown RBP20.34■□□□□ 0.85
Synpo-206ENSMUST00000130360 Ccdc60Q8C4J0 545 aa20.34■□□□□ 0.85
Synpo-206ENSMUST00000130360 RdxP26043 583 aaKnown RBP20.33■□□□□ 0.85
Synpo-206ENSMUST00000130360 Q3TQI7 289 aaKnown RBP20.33■□□□□ 0.84
Synpo-206ENSMUST00000130360 G3bp1P97855 465 aaKnown RBP20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 Rtn4Q99P72 1162 aaKnown RBP20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 Frmpd1A2AKB4 1549 aa20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 ErbinQ80TH2 1402 aa20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 PnnO35691 725 aaKnown RBP20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 Kiaa0754Q69ZZ9 979 aa20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 Camsap1A2AHC3 1581 aa20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 BicraF8VPZ9 1578 aa20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 Pcf11G3X9Z4 1553 aa20.32■□□□□ 0.84
Synpo-206ENSMUST00000130360 Rrp9Q91WM3 475 aaKnown RBP20.3■□□□□ 0.84
Synpo-206ENSMUST00000130360 Rab3gap2Q8BMG7 1366 aa20.3■□□□□ 0.84
Synpo-206ENSMUST00000130360 Ccdc183A2AJB1 534 aa20.3■□□□□ 0.84
Synpo-206ENSMUST00000130360 Glipr1l2Q9CQ35 332 aa20.3■□□□□ 0.84
Synpo-206ENSMUST00000130360 Ttll5Q8CHB8 1328 aa20.28■□□□□ 0.84
Synpo-206ENSMUST00000130360 Q7TT23 1179 aa20.28■□□□□ 0.84
Synpo-206ENSMUST00000130360 Plin1Q8CGN5 517 aa20.28■□□□□ 0.84
Synpo-206ENSMUST00000130360 Cd109Q8R422 1442 aa20.27■□□□□ 0.84
Synpo-206ENSMUST00000130360 Trim30aP15533 496 aa20.27■□□□□ 0.83
Synpo-206ENSMUST00000130360 Ppp2r1aQ76MZ3 589 aa20.27■□□□□ 0.83
Synpo-206ENSMUST00000130360 Casq1O09165 405 aa20.26■□□□□ 0.83
Synpo-206ENSMUST00000130360 Pde4cQ3UEI1 686 aa20.26■□□□□ 0.83
Synpo-206ENSMUST00000130360 EprsQ8CGC7 1512 aaKnown RBP20.26■□□□□ 0.83
Synpo-206ENSMUST00000130360 Ccdc146E9Q9F7 977 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms