RNA–Protein interactions for RNA: ENSMUST00000092155.11

Col11a1-201, Transcript of Collagen alpha-1(XI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col11a1, Length 7,667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1-201ENSMUST00000092155 Sh3bgrQ9WUZ7 214 aa12.81□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Fam193aQ8CGI1 1231 aaKnown RBP12.8□□□□□ -0.36
Col11a1-201ENSMUST00000092155 ChgaP26339 463 aaKnown RBP12.8□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Filip1lQ6P6L0 1131 aa12.8□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Chrna2Q91X60 512 aa12.8□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Cluap1Q8R3P7 413 aa12.8□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Nap1l3Q794H2 544 aa12.79□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Hspa5P20029 655 aaKnown RBP12.79□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Hap1O35668 628 aa12.79□□□□□ -0.36
Col11a1-201ENSMUST00000092155 A0A1L1SQF0 893 aa12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Zscan21Q07231 555 aa12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Brpf1B2RRD7 1212 aa12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Vps53Q8CCB4 832 aa12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Gcom1E9PZ54 550 aa12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 MyzapQ3UIJ9 466 aa12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Ylpm1Q9R0I7 1386 aaKnown RBP12.78□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Gm21969J3QJZ1 289 aa12.77□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Kri1Q8VDQ9 704 aaKnown RBP12.77□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Casq1O09165 405 aa12.77□□□□□ -0.36
Col11a1-201ENSMUST00000092155 Tmf1B9EKI3 1091 aa12.77□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Samd1D3YXK1 519 aa12.77□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Sox12Q04890 314 aa12.76□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Q3TQI7 289 aaKnown RBP12.75□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Hook1Q8BIL5 728 aa12.75□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Kif3cO35066 796 aa12.75□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Golga2Q921M4 999 aa12.75□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Gps2Q921N8 327 aa12.75□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Dixdc1Q80Y83 711 aa12.74□□□□□ -0.37
Col11a1-201ENSMUST00000092155 BbxQ8VBW5 907 aa12.74□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Gripap1Q8VD04 806 aa12.74□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Mrvi1Q9WUX5 899 aaKnown RBP12.74□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Kif4P33174 1231 aa12.74□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Rundc1Q0VDN7 615 aa12.74□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Fam13bQ8K2H3 851 aa12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Spag9Q58A65 1321 aaKnown RBP12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Srek1Q8BZX4 494 aaKnown RBP12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Hmgn5Q9JL35 406 aa12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 AcrbpQ3V140 540 aa12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 MlecQ6ZQI3 291 aaKnown RBP12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Krt82Q99M74 516 aa12.73□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Odf2A3KGV1 830 aaKnown RBP12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Kif3aP28741 701 aa12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Znf330Q922H9 316 aa12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 EzrP26040 586 aaKnown RBP12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Cgnl1Q6AW69 1298 aa12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Mns1Q61884 491 aa12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Pkd2O35245 966 aa12.72□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Def6Q8C2K1 630 aa12.71□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Rrp9Q91WM3 475 aaKnown RBP12.71□□□□□ -0.37
Col11a1-201ENSMUST00000092155 Fnbp4Q6ZQ03 1031 aa12.71□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Exoc6Q8R313 802 aa12.7□□□□□ -0.38
Col11a1-201ENSMUST00000092155 HmmrQ00547 794 aaKnown RBP12.7□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Hdgfl1Q2VPR5 283 aa12.7□□□□□ -0.38
Col11a1-201ENSMUST00000092155 U2af1Q9D883 239 aaKnown RBP12.7□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Ccdc173A0JLY1 547 aa12.69□□□□□ -0.38
Col11a1-201ENSMUST00000092155 NaspQ99MD9 773 aaKnown RBP12.69□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Evc2Q8K1G2 1220 aa12.69□□□□□ -0.38
Col11a1-201ENSMUST00000092155 PrkcshO08795 521 aa12.69□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Ccar1Q8CH18 1146 aaKnown RBP12.69□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Map4P27546 1125 aaKnown RBP12.69□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Plcd4Q8K3R3 807 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Stk26Q99JT2 416 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Fam43aQ8BUP8 424 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Fyco1Q8VDC1 1437 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Kif27Q7M6Z4 1394 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Paf1Q8K2T8 535 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Trim55G3X8Y1 545 aa12.68□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Rsph6aQ8CDR2 708 aa12.67□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Znf704Q9ERQ3 566 aa12.67□□□□□ -0.38
Col11a1-201ENSMUST00000092155 CntlnA2AM05 1397 aa12.67□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Cplx2P84086 134 aa12.67□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Polr3gQ6NXY9 223 aa12.66□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Chmp3Q9CQ10 224 aa12.66□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Ksr2Q3UVC0 959 aa12.66□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Gtf2e1Q9D0D5 440 aa12.66□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Arhgap35Q91YM2 1499 aa12.66□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Ccdc43Q9CR29 222 aaKnown RBP12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Necab1Q8BG18 352 aa12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 KinQ8K339 391 aa12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Bicd2Q921C5 820 aa12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Cep162Q6ZQ06 1403 aa12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 A0A0U1RNP2 1173 aa12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Nolc1E9Q5C9 702 aaKnown RBP12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Rec8Q8C5S7 591 aa12.65□□□□□ -0.38
Col11a1-201ENSMUST00000092155 Ppp1r18Q8BQ30 594 aa12.64□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Ifit1bl1D3Z6F0 470 aa12.64□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Fmn1Q05860 1466 aa12.64□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Mex3cQ05A36 652 aaKnown RBP12.64□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Pibf1E9Q6K3 756 aa12.63□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Cdkn1cP49919 348 aa12.63□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Nap1l1P28656 391 aaKnown RBP12.63□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Ciz1Q8VEH2 845 aa12.63□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Mphosph9A6H5Y1 991 aa12.62□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Rfx1P48377 963 aa12.62□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Znf526Q8BI66 675 aa12.62□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Cplx1P63040 134 aa12.61□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Baz1bQ9Z277 1479 aa12.61□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Gpatch3Q8BIY1 525 aa12.61□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Sin3aQ60520 1274 aaKnown RBP12.61□□□□□ -0.39
Col11a1-201ENSMUST00000092155 Ppm1eQ80TL0 749 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms