RNA–Protein interactions for RNA: ENSMUST00000092155.11

Col11a1-201, Transcript of Collagen alpha-1(XI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col11a1, Length 7,667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1-201ENSMUST00000092155 Rhox8Q6VSS7 320 aa17.57■□□□□ 0.4
Col11a1-201ENSMUST00000092155 Rpgrip1Q9EPQ2 1331 aa17.16■□□□□ 0.34
Col11a1-201ENSMUST00000092155 Cngb1E1AZ71 1325 aa17.1■□□□□ 0.33
Col11a1-201ENSMUST00000092155 Las1lA2BE28 776 aaKnown RBP16.98■□□□□ 0.31
Col11a1-201ENSMUST00000092155 Pelp1Q9DBD5 1123 aaKnown RBP16.84■□□□□ 0.29
Col11a1-201ENSMUST00000092155 Ehmt2Q9Z148 1263 aaKnown RBP16.56■□□□□ 0.24
Col11a1-201ENSMUST00000092155 Amer1Q7TS75 1132 aa16.34■□□□□ 0.21
Col11a1-201ENSMUST00000092155 Wdr66E9Q743 1299 aa16.23■□□□□ 0.19
Col11a1-201ENSMUST00000092155 Ube2uB1AUC4 352 aa16.01■□□□□ 0.15
Col11a1-201ENSMUST00000092155 CenpbP27790 599 aa15.99■□□□□ 0.15
Col11a1-201ENSMUST00000092155 Zeb1Q64318 1117 aa15.96■□□□□ 0.15
Col11a1-201ENSMUST00000092155 4930567H17RikQ3V0K5 233 aa15.94■□□□□ 0.14
Col11a1-201ENSMUST00000092155 Myt1Q8CFC2 1127 aa15.67■□□□□ 0.1
Col11a1-201ENSMUST00000092155 Stra8P70278 393 aa15.64■□□□□ 0.09
Col11a1-201ENSMUST00000092155 Ttbk1Q6PCN3 1308 aa15.53■□□□□ 0.08
Col11a1-201ENSMUST00000092155 Ccdc136Q3TVA9 1136 aa15.53■□□□□ 0.08
Col11a1-201ENSMUST00000092155 Esf1Q3V1V3 845 aaKnown RBP15.49■□□□□ 0.07
Col11a1-201ENSMUST00000092155 Gab3Q8BSM5 595 aa15.47■□□□□ 0.07
Col11a1-201ENSMUST00000092155 4933416C03RikQ3V063 378 aa15.44■□□□□ 0.06
Col11a1-201ENSMUST00000092155 Slc24a1Q91WD8 1130 aa15.42■□□□□ 0.06
Col11a1-201ENSMUST00000092155 Myt1lP97500 1187 aa15.32■□□□□ 0.04
Col11a1-201ENSMUST00000092155 NefmP08553 848 aa15.32■□□□□ 0.04
Col11a1-201ENSMUST00000092155 Npm2Q80W85 207 aa15.31■□□□□ 0.04
Col11a1-201ENSMUST00000092155 Acin1Q9JIX8 1338 aaKnown RBP15.3■□□□□ 0.04
Col11a1-201ENSMUST00000092155 Trim41Q5NCC3 630 aa15.29■□□□□ 0.04
Col11a1-201ENSMUST00000092155 Cdk11bP24788 784 aaKnown RBP15.18■□□□□ 0.02
Col11a1-201ENSMUST00000092155 Tnnt3Q9QZ47 272 aa15.14■□□□□ 0.01
Col11a1-201ENSMUST00000092155 NischQ80TM9 1593 aa15.12■□□□□ 0.01
Col11a1-201ENSMUST00000092155 Rtl5Q5DTT4 599 aa15.11■□□□□ 0.01
Col11a1-201ENSMUST00000092155 NeflP08551 543 aa15.1■□□□□ 0.01
Col11a1-201ENSMUST00000092155 UbtfP25976 765 aaKnown RBP15.02■□□□□ -0
Col11a1-201ENSMUST00000092155 Rtl1Q7M732 1744 aa15□□□□□ -0.01
Col11a1-201ENSMUST00000092155 HrcG5E8J6 738 aa14.99□□□□□ -0.01
Col11a1-201ENSMUST00000092155 DiexfQ8BTT6 772 aaKnown RBP14.99□□□□□ -0.01
Col11a1-201ENSMUST00000092155 NrdcQ8BHG1 1161 aa14.98□□□□□ -0.01
Col11a1-201ENSMUST00000092155 Anp32bQ9EST5 272 aaKnown RBP14.96□□□□□ -0.01
Col11a1-201ENSMUST00000092155 Ccdc180J3QNE4 1664 aa14.95□□□□□ -0.02
Col11a1-201ENSMUST00000092155 Pcgf6Q99NA9 353 aa14.94□□□□□ -0.02
Col11a1-201ENSMUST00000092155 Nop58Q6DFW4 536 aaKnown RBP14.91□□□□□ -0.02
Col11a1-201ENSMUST00000092155 Eif5bQ05D44 1216 aaKnown RBP14.86□□□□□ -0.03
Col11a1-201ENSMUST00000092155 Ppargc1bQ8VHJ7 1014 aa14.82□□□□□ -0.04
Col11a1-201ENSMUST00000092155 Neurod1Q60867 357 aa14.81□□□□□ -0.04
Col11a1-201ENSMUST00000092155 Chic1Q8CBW7 227 aa14.73□□□□□ -0.05
Col11a1-201ENSMUST00000092155 NclP09405 707 aaKnown RBP14.72□□□□□ -0.05
Col11a1-201ENSMUST00000092155 DaxxO35613 739 aa14.7□□□□□ -0.06
Col11a1-201ENSMUST00000092155 Os9Q8K2C7 672 aa14.67□□□□□ -0.06
Col11a1-201ENSMUST00000092155 Ap3b1Q9Z1T1 1105 aa14.67□□□□□ -0.06
Col11a1-201ENSMUST00000092155 Il27Q8K3I6 234 aa14.64□□□□□ -0.07
Col11a1-201ENSMUST00000092155 Zbtb7cQ8VCZ7 619 aa14.61□□□□□ -0.07
Col11a1-201ENSMUST00000092155 Anp32aO35381 247 aa14.57□□□□□ -0.08
Col11a1-201ENSMUST00000092155 Ythdc1E9Q5K9 736 aaKnown RBP14.56□□□□□ -0.08
Col11a1-201ENSMUST00000092155 Plppr3Q7TPB0 716 aa14.54□□□□□ -0.08
Col11a1-201ENSMUST00000092155 Supt5hO55201 1082 aaKnown RBP14.52□□□□□ -0.09
Col11a1-201ENSMUST00000092155 CatipB9EKE5 520 aa14.51□□□□□ -0.09
Col11a1-201ENSMUST00000092155 Fam50aQ9WV03 339 aaKnown RBP14.51□□□□□ -0.09
Col11a1-201ENSMUST00000092155 TonslQ6NZL6 1363 aa14.49□□□□□ -0.09
Col11a1-201ENSMUST00000092155 Ifnlr1Q8CGK5 535 aa14.45□□□□□ -0.1
Col11a1-201ENSMUST00000092155 Zbtb4Q5F293 982 aa14.44□□□□□ -0.1
Col11a1-201ENSMUST00000092155 Prdm10Q3UTQ7 1184 aa14.42□□□□□ -0.1
Col11a1-201ENSMUST00000092155 ArxO35085 564 aa14.34□□□□□ -0.11
Col11a1-201ENSMUST00000092155 Upf2A2AT37 1269 aaKnown RBP14.3□□□□□ -0.12
Col11a1-201ENSMUST00000092155 Lmod3E9QA62 571 aa14.27□□□□□ -0.13
Col11a1-201ENSMUST00000092155 Rangap1P46061 589 aaKnown RBP14.26□□□□□ -0.13
Col11a1-201ENSMUST00000092155 ClspnQ80YR7 1315 aa14.24□□□□□ -0.13
Col11a1-201ENSMUST00000092155 Gm13697A2AK42 830 aa14.24□□□□□ -0.13
Col11a1-201ENSMUST00000092155 Zcchc6Q5BLK4 1491 aaKnown RBP14.22□□□□□ -0.13
Col11a1-201ENSMUST00000092155 Ccdc9Q8VC31 543 aaKnown RBP14.22□□□□□ -0.13
Col11a1-201ENSMUST00000092155 Atp1b4Q99ME6 356 aa14.19□□□□□ -0.14
Col11a1-201ENSMUST00000092155 Polr3glQ8R0C0 218 aa14.17□□□□□ -0.14
Col11a1-201ENSMUST00000092155 Hsp90aa1P07901 733 aaKnown RBP14.15□□□□□ -0.14
Col11a1-201ENSMUST00000092155 Hnrnpul2Q00PI9 745 aaKnown RBP14.14□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Nlrp6Q91WS2 869 aa14.12□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Mier1Q5UAK0 511 aa14.12□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Aplp2Q06335 707 aa14.12□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Anks4bQ8K3X6 423 aa14.1□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Csrnp3P59055 597 aa14.08□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Trim44Q9QXA7 346 aa14.08□□□□□ -0.15
Col11a1-201ENSMUST00000092155 Erich6D3Z6S9 713 aa14.08□□□□□ -0.16
Col11a1-201ENSMUST00000092155 Mapk8ip2Q9ERE9 830 aa14.07□□□□□ -0.16
Col11a1-201ENSMUST00000092155 Gm38655A0A286YDK6 273 aa14.04□□□□□ -0.16
Col11a1-201ENSMUST00000092155 Ppp4r2Q0VGB7 417 aa14.02□□□□□ -0.16
Col11a1-201ENSMUST00000092155 Calr4Q3TQS0 420 aa14□□□□□ -0.17
Col11a1-201ENSMUST00000092155 DekQ7TNV0 380 aaKnown RBP13.99□□□□□ -0.17
Col11a1-201ENSMUST00000092155 Abcc9P70170 1546 aa13.96□□□□□ -0.17
Col11a1-201ENSMUST00000092155 Gm13695A2AK44 830 aa13.95□□□□□ -0.18
Col11a1-201ENSMUST00000092155 Gm35339A0A140LHH9 1649 aa13.91□□□□□ -0.18
Col11a1-201ENSMUST00000092155 Lmod2Q3UHZ5 550 aa13.9□□□□□ -0.18
Col11a1-201ENSMUST00000092155 Wdr43Q6ZQL4 677 aaKnown RBP13.89□□□□□ -0.19
Col11a1-201ENSMUST00000092155 Hdac5Q9Z2V6 1113 aa13.88□□□□□ -0.19
Col11a1-201ENSMUST00000092155 Vsig10D3YX43 558 aa13.87□□□□□ -0.19
Col11a1-201ENSMUST00000092155 Plekhg3Q4VAC9 1341 aa13.86□□□□□ -0.19
Col11a1-201ENSMUST00000092155 Fkbp15Q6P9Q6 1216 aaKnown RBP13.86□□□□□ -0.19
Col11a1-201ENSMUST00000092155 PtmaP26350 111 aa13.8□□□□□ -0.2
Col11a1-201ENSMUST00000092155 Npm1Q61937 292 aaKnown RBP13.8□□□□□ -0.2
Col11a1-201ENSMUST00000092155 Irx6Q9ER75 438 aa13.79□□□□□ -0.2
Col11a1-201ENSMUST00000092155 Adam1bQ8R534 806 aa13.78□□□□□ -0.2
Col11a1-201ENSMUST00000092155 Tnnt2P50752 301 aa13.75□□□□□ -0.21
Col11a1-201ENSMUST00000092155 Htatsf1Q8BGC0 757 aa13.75□□□□□ -0.21
Col11a1-201ENSMUST00000092155 Hsp90ab1P11499 724 aaKnown RBP13.75□□□□□ -0.21
Col11a1-201ENSMUST00000092155 CanxP35564 591 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms