RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Speer4f1Q9D5Q6 258 aa9.11□□□□□ -0.95
Col6a6-201ENSMUST00000060896 TchhA0A0B4J1F9 1599 aa9.11□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Pla2r1Q62028 1487 aa9.11□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Tmf1B9EKI3 1091 aa9.1□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Supt16hQ920B9 1047 aa9.1□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Irx6Q9ER75 438 aa9.1□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Upf2A2AT37 1269 aaKnown RBP9.1□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Tcerg1Q8CGF7 1100 aaKnown RBP9.1□□□□□ -0.95
Col6a6-201ENSMUST00000060896 BC005561E9Q5E2 1589 aa9.1□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Mak16Q8BGS0 296 aaKnown RBP9.09□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Ncoa2Q61026 1462 aa9.09□□□□□ -0.95
Col6a6-201ENSMUST00000060896 Sall3Q62255 1320 aa9.08□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Kcnh8P59111 1102 aa9.08□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Fam163aQ8CAA5 168 aa9.08□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Trim30dE9PWL0 497 aa9.07□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Usp40Q8BWR4 1235 aa9.07□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Phf23Q8BSN5 401 aa9.07□□□□□ -0.96
Col6a6-201ENSMUST00000060896 4930567H17RikQ3V0K5 233 aa9.06□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Naip5Q9R016 1403 aa9.06□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Arhgap5P97393 1501 aa9.06□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Cd109Q8R422 1442 aa9.06□□□□□ -0.96
Col6a6-201ENSMUST00000060896 WizO88286 1684 aaKnown RBP9.06□□□□□ -0.96
Col6a6-201ENSMUST00000060896 1700019A02RikA0A087WPV9 146 aa9.05□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Ccdc141E9Q8Q6 1531 aa9.05□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Gm6268A2A3U9 297 aa9.05□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Arid4bA2CG63 1314 aaKnown RBP9.05□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Zscan10Q3URR7 782 aa9.05□□□□□ -0.96
Col6a6-201ENSMUST00000060896 U2af1Q9D883 239 aaKnown RBP9.05□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Magi1Q6RHR9 1471 aa9.04□□□□□ -0.96
Col6a6-201ENSMUST00000060896 MyclP10166 368 aa9.04□□□□□ -0.96
Col6a6-201ENSMUST00000060896 CanxP35564 591 aaKnown RBP9.04□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Rtl5Q5DTT4 599 aa9.04□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Birc3O08863 600 aa9.03□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Gm14025A2AP89 1413 aa9.03□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Il16O54824 1322 aa9.03□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Zcchc11B2RX14 1644 aaKnown RBP9.03□□□□□ -0.96
Col6a6-201ENSMUST00000060896 Fam184bQ0KK56 942 aa9.03□□□□□ -0.96
Col6a6-201ENSMUST00000060896 PnisrA2AJT4 805 aaKnown RBP9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Znf330Q922H9 316 aa9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Magi3Q9EQJ9 1476 aa9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Kif7B7ZNG0 1348 aa9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Golga2Q921M4 999 aa9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Rwdd1Q9CQK7 243 aa9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Mink1Q9JM52 1308 aa9.02□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Utp14aQ640M1 767 aaKnown RBP9.01□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Washc2Q6PGL7 1334 aa9.01□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Shq1Q7TMX5 569 aa9□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Sox12Q04890 314 aa9□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Arhgef40Q3UPH7 1517 aa9□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Myom3A2ABU4 1439 aa9□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Mapk8ip3Q9ESN9 1337 aa9□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Txndc2Q6P902 515 aa8.99□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Trappc8E9PWG2 1437 aa8.99□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Cluap1Q8R3P7 413 aa8.99□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Zfp444Q3TDV8 331 aaKnown RBP8.98□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Adgrb2Q8CGM1 1561 aa8.98□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Chmp5Q9D7S9 219 aa8.98□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Puf60Q3UEB3 564 aaKnown RBP8.98□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Pak3Q61036 559 aa8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Tmco5bQ80X59 307 aa8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Hsp90ab1P11499 724 aaKnown RBP8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 ChgaP26339 463 aaKnown RBP8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Rock1P70335 1354 aa8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 ErbinQ80TH2 1402 aa8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Prdm16A2A935 1275 aa8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Ksr2Q3UVC0 959 aa8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 U2surpQ6NV83 1029 aaKnown RBP8.97□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Rprd2Q6NXI6 1469 aaKnown RBP8.96□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Erich3F6QRE9 1637 aa8.96□□□□□ -0.97
Col6a6-201ENSMUST00000060896 Pibf1E9Q6K3 756 aa8.96□□□□□ -0.98
Col6a6-201ENSMUST00000060896 L3mbtl2P59178 703 aa8.96□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Psme1P97371 249 aa8.96□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Q9D9H8 365 aa8.96□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Prex2Q3LAC4 1598 aa8.96□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Vsig10D3YX43 558 aa8.95□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Kdm5bQ80Y84 1544 aa8.95□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Lmo7E9PYF4 1699 aaKnown RBP8.95□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Tsen2Q6P7W5 460 aa8.95□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Col17a1Q07563 1470 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Gapvd1Q6PAR5 1458 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Igf1rQ60751 1373 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Ncoa1P70365 1447 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Plekhg5Q66T02 1073 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Ppp2r1aQ76MZ3 589 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Pknox2Q8BG99 474 aa8.94□□□□□ -0.98
Col6a6-201ENSMUST00000060896 PrxO55103 1391 aa8.93□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Zranb1Q7M760 708 aa8.93□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Nsd2Q8BVE8 1365 aa8.93□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Abcc1O35379 1528 aa8.92□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Adgrl3Q80TS3 1537 aa8.92□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Apaf1O88879 1249 aa8.92□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Fgd1P52734 960 aa8.92□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Afap1Q80YS6 731 aa8.92□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Rfx7F8VPJ6 1459 aa8.92□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Rapgef6Q5NCJ1 1609 aa8.91□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Atp10dQ8K2X1 1416 aa8.91□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Ccdc30Q8BVF4 654 aa8.91□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Spryd3E9Q9B3 442 aa8.9□□□□□ -0.98
Col6a6-201ENSMUST00000060896 Pank1Q8K4K6 548 aa8.9□□□□□ -0.98
Col6a6-201ENSMUST00000060896 GsdmaQ9EST1 446 aa8.9□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms