RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Shq1Q7TMX5 569 aa21.91■■□□□ 1.1
Pcdhac2-201ENSMUST00000047479 Ciz1Q8VEH2 845 aa21.9■■□□□ 1.1
Pcdhac2-201ENSMUST00000047479 Pank3Q8R2W9 370 aa21.88■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Pabpn1Q8CCS6 302 aaKnown RBP21.88■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Sycp2Q9CUU3 1500 aa21.87■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Calcoco2A2A6M5 331 aa21.86■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Ccdc146E9Q9F7 977 aa21.85■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Usp40Q8BWR4 1235 aa21.85■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Isy1Q69ZQ2 285 aaKnown RBP21.83■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 CftrP26361 1476 aa21.83■■□□□ 1.09
Pcdhac2-201ENSMUST00000047479 Vps53Q8CCB4 832 aa21.82■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 AppP12023 770 aa21.82■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Mink1Q9JM52 1308 aa21.82■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Ccdc47Q9D024 483 aaKnown RBP21.81■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 UacaQ8CGB3 1411 aa21.81■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Ccdc60Q8C4J0 545 aa21.81■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 AU015836B2RUM3 263 aa21.8■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Atp6v1dP57746 247 aa21.8■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Mical1Q8VDP3 1048 aa21.8■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Usp47Q8BY87 1376 aa21.8■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Ccer1Q9CQL2 403 aa21.8■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Smc4Q8CG47 1286 aa21.79■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Cgnl1Q6AW69 1298 aa21.79■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Tomm22Q9CPQ3 142 aa21.78■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 LrpprcQ6PB66 1392 aaKnown RBP21.78■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Rab11fip3Q8CHD8 1047 aa21.78■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Tpd52l1O54818 204 aa21.78■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Inpp5dQ9ES52 1191 aa21.78■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Irx3P81067 507 aa21.77■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Rapgef2Q8CHG7 1496 aa21.77■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Gm21190A0A0G2JGJ6 266 aa21.77■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Cald1E9QA15 768 aaKnown RBP21.77■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 Ipo9Q91YE6 1041 aa21.77■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 WrnO09053 1401 aa21.77■■□□□ 1.08
Pcdhac2-201ENSMUST00000047479 GsdmaQ9EST1 446 aa21.76■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 MsnP26041 577 aaKnown RBP21.76■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Chmp7Q8R1T1 451 aa21.76■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Soga1E1U8D0 1418 aa21.75■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Bcl11bQ99PV8 884 aa21.75■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Fyb1O35601 819 aa21.72■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 RdxP26043 583 aaKnown RBP21.72■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Kif7B7ZNG0 1348 aa21.72■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 G3bp1P97855 465 aaKnown RBP21.72■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Cc2d1aQ8K1A6 943 aa21.72■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Fam184bQ0KK56 942 aa21.71■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Dhx29Q6PGC1 1365 aaKnown RBP21.71■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Chrna2Q91X60 512 aa21.71■■□□□ 1.07
Pcdhac2-201ENSMUST00000047479 Atad2bE9Q166 1460 aaKnown RBP21.7■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Cecr2E9Q2Z1 1453 aa21.69■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Kri1Q8VDQ9 704 aaKnown RBP21.68■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Cc2d2bA0A286YDU8 1405 aa21.68■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Gm21969J3QJZ1 289 aa21.68■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Dhx16G3X8X0 1044 aaKnown RBP21.67■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Ylpm1Q9R0I7 1386 aaKnown RBP21.67■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Jph4Q80WT0 628 aa21.66■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Rock1P70335 1354 aa21.66■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Tpm3P21107 285 aaKnown RBP21.65■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Shroom4Q1W617 1475 aa21.65■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 ErbinQ80TH2 1402 aa21.65■■□□□ 1.06
Pcdhac2-201ENSMUST00000047479 Eif2s2Q99L45 331 aaKnown RBP21.64■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Ddx11Q6AXC6 880 aa21.64■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Tdrd9Q14BI7 1383 aa21.64■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Ncoa2Q61026 1462 aa21.63■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Krt82Q99M74 516 aa21.62■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Tnnt2P50752 301 aa21.62■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Synj1Q8CHC4 1574 aa21.62■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Sf3a1Q8K4Z5 791 aaKnown RBP21.61■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Tceal9Q9DD24 104 aa21.61■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 St18Q80TY4 1045 aa21.61■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Filip1lQ6P6L0 1131 aa21.6■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Pip4k2bQ80XI4 416 aa21.6■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 SlkO54988 1233 aa21.6■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Cplx2P84086 134 aa21.6■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Gpatch11Q3UFS4 262 aa21.6■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Kiaa0754Q69ZZ9 979 aa21.6■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Noc3lQ8VI84 807 aaKnown RBP21.59■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 BccipQ9CWI3 316 aa21.59■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Cspp1B2RX88 1205 aa21.58■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Triml2E9PW10 424 aa21.58■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Nap1l3Q794H2 544 aa21.58■■□□□ 1.05
Pcdhac2-201ENSMUST00000047479 Rsph3aQ3UFY4 516 aa21.58■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Gsdma3Q5Y4Y6 464 aa21.58■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Smg6P61406 1418 aaKnown RBP21.58■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Gsto1O09131 240 aa21.57■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Zscan10Q3URR7 782 aa21.57■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Atf3Q60765 181 aa21.57■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Ralbp1Q62172 648 aa21.57■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Crybg2B7ZCC2 1516 aa21.56■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 ChgaP26339 463 aaKnown RBP21.56■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Sirt1Q923E4 737 aa21.56■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Dapk1Q80YE7 1442 aa21.55■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Tpm4Q6IRU2 248 aa21.55■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Usp16Q99LG0 825 aa21.55■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Ttll5Q8CHB8 1328 aa21.55■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Esx1O88933 382 aa21.54■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Evc2Q8K1G2 1220 aa21.54■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Srek1Q8BZX4 494 aaKnown RBP21.54■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Smarca4Q3TKT4 1613 aaKnown RBP21.54■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Tpm2P58774 284 aa21.54■■□□□ 1.04
Pcdhac2-201ENSMUST00000047479 Neurod6P48986 337 aa21.54■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms