RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 SynmQ70IV5 1561 aa10.39□□□□□ -0.75
Ssr1-201ENSMUST00000021864 R3hcc1Q8BSI6 488 aa10.39□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Ccdc27Q3V036 639 aa10.38□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Ecm2Q5FW85 670 aa10.38□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Noc3lQ8VI84 807 aaKnown RBP10.38□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Cux1P53564 1515 aa10.37□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Iffo2Q8R2V2 512 aa10.37□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Cald1E9QA15 768 aaKnown RBP10.37□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Ap3b2Q9JME5 1082 aa10.37□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Map3k5O35099 1380 aa10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Ythdc2B2RR83 1445 aaKnown RBP10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Smarce1O54941 411 aaKnown RBP10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 U2surpQ6NV83 1029 aaKnown RBP10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Afap1Q80YS6 731 aa10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Hspa5P20029 655 aaKnown RBP10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Q3TQI7 289 aaKnown RBP10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Shq1Q7TMX5 569 aa10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Pcmtd1P59913 357 aa10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Armcx1Q9CX83 456 aa10.36□□□□□ -0.75
Ssr1-201ENSMUST00000021864 MecomP14404 1042 aa10.35□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Nsd2Q8BVE8 1365 aa10.35□□□□□ -0.75
Ssr1-201ENSMUST00000021864 A2mQ6GQT1 1474 aa10.34□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Znf316Q6PGE4 1016 aa10.34□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Ccdc47Q9D024 483 aaKnown RBP10.34□□□□□ -0.75
Ssr1-201ENSMUST00000021864 SetQ9EQU5 289 aaKnown RBP10.34□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Top2bQ64511 1612 aa10.34□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Fan1Q69ZT1 1020 aa10.33□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Pde4cQ3UEI1 686 aa10.33□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Stard8Q8K031 1019 aa10.33□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Rundc1Q0VDN7 615 aa10.32□□□□□ -0.76
Ssr1-201ENSMUST00000021864 ErbinQ80TH2 1402 aa10.32□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Isy1Q69ZQ2 285 aaKnown RBP10.32□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Gapvd1Q6PAR5 1458 aa10.32□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Erich6bQ9D4S6 220 aa10.31□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Atf3Q60765 181 aa10.31□□□□□ -0.76
Ssr1-201ENSMUST00000021864 CenpjQ569L8 1344 aa10.31□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Disp1Q3TDN0 1521 aa10.3□□□□□ -0.76
Ssr1-201ENSMUST00000021864 GphnQ8BUV3 769 aaKnown RBP10.3□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Vps53Q8CCB4 832 aa10.3□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Dbr1Q923B1 550 aa10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Chmp3Q9CQ10 224 aa10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Srcin1Q9QWI6 1250 aa10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Atp10dQ8K2X1 1416 aa10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 RdxP26043 583 aaKnown RBP10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Ddx11Q6AXC6 880 aa10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Tpm4Q6IRU2 248 aa10.29□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Magi1Q6RHR9 1471 aa10.28□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Fbln2P37889 1221 aa10.28□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Plin1Q8CGN5 517 aa10.28□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Tpd52l1O54818 204 aa10.28□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Tnnt2P50752 301 aa10.27□□□□□ -0.76
Ssr1-201ENSMUST00000021864 Ppm1fQ8CGA0 452 aa10.27□□□□□ -0.76
Ssr1-201ENSMUST00000021864 U2af1Q9D883 239 aaKnown RBP10.27□□□□□ -0.76
Ssr1-201ENSMUST00000021864 B4galnt3Q6L8S8 986 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Kif21aQ9QXL2 1672 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Birc3O08863 600 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 MsnP26041 577 aaKnown RBP10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Tmco5bQ80X59 307 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Rab11fip3Q8CHD8 1047 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Rock2P70336 1388 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 CgnP59242 1191 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Golga2Q921M4 999 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Atp6v1dP57746 247 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Tomm22Q9CPQ3 142 aa10.26□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Tnnt1O88346 262 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Naip1Q9QWK5 1403 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 AU015836B2RUM3 263 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Speer4f1Q9D5Q6 258 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Tpm3P21107 285 aaKnown RBP10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 OvosQ3UU35 1456 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 EspnQ9ET47 871 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Slc4a1apE9PX68 744 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Tpm2P58774 284 aa10.25□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Kri1Q8VDQ9 704 aaKnown RBP10.24□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Brpf1B2RRD7 1212 aa10.23□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Mug1P28665 1476 aa10.23□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Pak3Q61036 559 aa10.23□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Chmp5Q9D7S9 219 aa10.23□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Abcc1O35379 1528 aa10.23□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Evi5lH3BKQ3 813 aa10.23□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Map7d2A2AG50 781 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Odf2A3KGV1 830 aaKnown RBP10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Ciz1Q8VEH2 845 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Smc4Q8CG47 1286 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Spryd3E9Q9B3 442 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Fyb1O35601 819 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Ccer1Q9CQL2 403 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Arhgef5E9Q7D5 1581 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Q9D9H8 365 aa10.22□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Mink1Q9JM52 1308 aa10.21□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Zscan21Q07231 555 aa10.21□□□□□ -0.77
Ssr1-201ENSMUST00000021864 Usp40Q8BWR4 1235 aa10.21□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Tcerg1Q8CGF7 1100 aaKnown RBP10.21□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Gm21969J3QJZ1 289 aa10.21□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Tpm1P58771 284 aa10.2□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Ccar1Q8CH18 1146 aaKnown RBP10.2□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Sirt1Q923E4 737 aa10.2□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Dnai1Q8C0M8 701 aa10.2□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Dnttip2Q8R2M2 758 aaKnown RBP10.2□□□□□ -0.78
Ssr1-201ENSMUST00000021864 Fam71e1A1L3C1 212 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms