RNA–Protein interactions for RNA: ENSMUST00000021335.6

Scfd1-201, Transcript of Sec1 family domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scfd1, Length 2,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1-201ENSMUST00000021335 Hoxa2P31245 372 aa9.4□□□□□ -0.9
Scfd1-201ENSMUST00000021335 Pxylp1Q8BHA9 480 aa9.4□□□□□ -0.9
Scfd1-201ENSMUST00000021335 Fkbp15Q6P9Q6 1216 aaKnown RBP9.4□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Ano8Q6PB70 1060 aa9.39□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Dnajc5gQ8C632 165 aa9.38□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Fxr2Q9WVR4 673 aaKnown RBP9.38□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Col9a1Q05722 921 aa9.38□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Secisbp2lQ6A098 1086 aaKnown RBP9.38□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Adam19O35674 920 aa9.36□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Atf4Q06507 349 aa9.36□□□□□ -0.91
Scfd1-201ENSMUST00000021335 PsdQ5DTT2 1024 aa9.36□□□□□ -0.91
Scfd1-201ENSMUST00000021335 SmapQ9R0P4 181 aaKnown RBP9.36□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Rgs9O54828 675 aa9.36□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Abcf1Q6P542 837 aaKnown RBP9.36□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Spaca7Q9D2S4 182 aa9.35□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Speer3W4VSP1 261 aa9.35□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Kiaa1522A2A7S8 1013 aa9.35□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Irx5Q9JKQ4 484 aa9.35□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Msh5Q9QUM7 833 aa9.35□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Pola2P33611 600 aa9.34□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Pcdhgb4Q91XX6 912 aa9.34□□□□□ -0.91
Scfd1-201ENSMUST00000021335 Ints3Q7TPD0 1041 aaKnown RBP9.33□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Themis2Q91YX0 663 aa9.33□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Dnajc14Q921R4 703 aa9.33□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Prr18Q6PAN7 307 aa9.31□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Apbb1Q9QXJ1 710 aa9.31□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Rem2Q8VEL9 341 aa9.3□□□□□ -0.92
Scfd1-201ENSMUST00000021335 OatP29758 439 aa9.3□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Nkx2-3P97334 362 aa9.29□□□□□ -0.92
Scfd1-201ENSMUST00000021335 ClmQ7TSN2 230 aa9.28□□□□□ -0.92
Scfd1-201ENSMUST00000021335 TsksO54887 585 aa9.28□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Rbm46P86049 533 aa9.28□□□□□ -0.92
Scfd1-201ENSMUST00000021335 FcrlaQ920A9 352 aa9.28□□□□□ -0.92
Scfd1-201ENSMUST00000021335 Pcdh10E9PXQ7 1057 aa9.27□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Fmr1nbQ80ZA7 238 aa9.27□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Gm20503G3UZK1 150 aa9.26□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Cyp8b1O88962 500 aa9.26□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Gigyf2Q6Y7W8 1291 aaKnown RBP9.26□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Clcn1Q64347 994 aa9.25□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Ier5lQ99J55 406 aa9.25□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Rccd1Q8BTU7 377 aa9.24□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Ptcd1Q8C2E4 695 aaKnown RBP9.24□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Q9CQ90 155 aa9.23□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Tbc1d12Q6A039 696 aa9.22□□□□□ -0.93
Scfd1-201ENSMUST00000021335 Adnp2Q8CHC8 1165 aaKnown RBP9.2□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Arid5bQ8BM75 1188 aaKnown RBP9.2□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Ttll13A4Q9F6 804 aa9.19□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Klra4Q60651 263 aa9.19□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Rnf25Q9QZR0 456 aa9.19□□□□□ -0.94
Scfd1-201ENSMUST00000021335 St18Q80TY4 1045 aa9.18□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Pcdhb16Q91Y03 802 aa9.18□□□□□ -0.94
Scfd1-201ENSMUST00000021335 LrgukQ9D5S7 820 aa9.17□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Sulf1Q8K007 870 aa9.16□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Myo1bP46735 1107 aa9.16□□□□□ -0.94
Scfd1-201ENSMUST00000021335 Bcl11aQ9QYE3 773 aa9.15□□□□□ -0.94
Scfd1-201ENSMUST00000021335 March10E9PX79 788 aa9.14□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Pkd2O35245 966 aa9.14□□□□□ -0.95
Scfd1-201ENSMUST00000021335 MetrnQ8C1Q4 291 aa9.14□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Ms4a4cQ9D3F6 226 aa9.14□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Usp3Q91W36 520 aaKnown RBP9.13□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Ccdc34Q3UI66 367 aa9.12□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Large2Q5XPT3 690 aa9.12□□□□□ -0.95
Scfd1-201ENSMUST00000021335 MlecQ6ZQI3 291 aaKnown RBP9.12□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Trim32Q8CH72 655 aa9.12□□□□□ -0.95
Scfd1-201ENSMUST00000021335 A0A1Y7VJH8 109 aa9.12□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Adamts19P59509 1210 aa9.12□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Igflr1Q3U4N7 345 aa9.11□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Kcnc4Q8R1C0 628 aa9.11□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Slc5a4bQ91ZP4 660 aa9.11□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Pelp1Q9DBD5 1123 aaKnown RBP9.11□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Limd1Q9QXD8 668 aa9.11□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Armc3A2AU72 881 aa9.09□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Dsc3P55850 896 aa9.09□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Dcbld2Q91ZV3 769 aa9.09□□□□□ -0.95
Scfd1-201ENSMUST00000021335 Stk11ipQ3TAA7 1072 aa9.08□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Rnf40Q3U319 1001 aa9.08□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Wdr44Q6NVE8 915 aa9.08□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Chtf18Q8BIW9 969 aa9.08□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Rhox13F6YCR7 232 aa9.08□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Slc27a5Q4LDG0 689 aa9.07□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Gm11939A2A592 99 aa9.06□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Gpc1Q9QZF2 557 aa9.06□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Emid1Q91VF5 444 aa9.06□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Tfip11Q9ERA6 838 aaKnown RBP9.06□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Zfp943Q6NZP4 507 aa9.04□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Amer1Q7TS75 1132 aa9.04□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Tpcn1Q9EQJ0 817 aa9.04□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Trim26Q99PN3 545 aa9.04□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Znf354bQ9QXT9 601 aa9.04□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Dph2Q9CR25 489 aa9.03□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Tie1Q06806 1134 aa9.03□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Lmod2Q3UHZ5 550 aa9.03□□□□□ -0.96
Scfd1-201ENSMUST00000021335 Nckap5lQ6GQX2 1323 aa9.02□□□□□ -0.97
Scfd1-201ENSMUST00000021335 Eml3Q8VC03 897 aa9.01□□□□□ -0.97
Scfd1-201ENSMUST00000021335 Creld1Q91XD7 420 aa9.01□□□□□ -0.97
Scfd1-201ENSMUST00000021335 SowahdQ8BY98 327 aa9.01□□□□□ -0.97
Scfd1-201ENSMUST00000021335 Map2k7Q8CE90 535 aa9.01□□□□□ -0.97
Scfd1-201ENSMUST00000021335 Ccdc61Q3UJV1 511 aa9□□□□□ -0.97
Scfd1-201ENSMUST00000021335 Rnf225Q9D7D1 332 aa9□□□□□ -0.97
Scfd1-201ENSMUST00000021335 Erbb3Q61526 1339 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms