RNA–Protein interactions for RNA: ENSMUST00000021335.6

Scfd1-201, Transcript of Sec1 family domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scfd1, Length 2,096 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1-201ENSMUST00000021335 Chic1Q8CBW7 227 aa19.82■□□□□ 0.76
Scfd1-201ENSMUST00000021335 Mapk8ip2Q9ERE9 830 aa18.86■□□□□ 0.61
Scfd1-201ENSMUST00000021335 Phf23Q8BSN5 401 aa18.1■□□□□ 0.49
Scfd1-201ENSMUST00000021335 Plppr3Q7TPB0 716 aa17.76■□□□□ 0.43
Scfd1-201ENSMUST00000021335 Gab3Q8BSM5 595 aa17.34■□□□□ 0.37
Scfd1-201ENSMUST00000021335 Kcna4Q61423 654 aa16.79■□□□□ 0.28
Scfd1-201ENSMUST00000021335 Senp3Q9EP97 568 aaKnown RBP16.73■□□□□ 0.27
Scfd1-201ENSMUST00000021335 Ppargc1bQ8VHJ7 1014 aa15.3■□□□□ 0.04
Scfd1-201ENSMUST00000021335 Dmrt2Q8BG36 561 aa14.96□□□□□ -0.02
Scfd1-201ENSMUST00000021335 Trap1aP19473 224 aa14.68□□□□□ -0.06
Scfd1-201ENSMUST00000021335 Hoxd11P23813 323 aa14.48□□□□□ -0.09
Scfd1-201ENSMUST00000021335 Slc4a1apE9PX68 744 aa14.47□□□□□ -0.09
Scfd1-201ENSMUST00000021335 Ube2uB1AUC4 352 aa14.42□□□□□ -0.1
Scfd1-201ENSMUST00000021335 Atf5O70191 283 aa14.17□□□□□ -0.14
Scfd1-201ENSMUST00000021335 Fam71e1A1L3C1 212 aa13.84□□□□□ -0.19
Scfd1-201ENSMUST00000021335 Chrna2Q91X60 512 aa13.82□□□□□ -0.2
Scfd1-201ENSMUST00000021335 Ppp4r2Q0VGB7 417 aa13.81□□□□□ -0.2
Scfd1-201ENSMUST00000021335 Fam163aQ8CAA5 168 aa13.76□□□□□ -0.21
Scfd1-201ENSMUST00000021335 1700123L14RikQ3V2K7 440 aa13.74□□□□□ -0.21
Scfd1-201ENSMUST00000021335 Znf219Q6IQX8 726 aa13.74□□□□□ -0.21
Scfd1-201ENSMUST00000021335 Hs6st3Q9QYK4 470 aa13.7□□□□□ -0.22
Scfd1-201ENSMUST00000021335 Rsph4aQ8BYM7 716 aa13.67□□□□□ -0.22
Scfd1-201ENSMUST00000021335 Dnajc5bQ9CQ94 199 aa13.62□□□□□ -0.23
Scfd1-201ENSMUST00000021335 Rimbp2Q80U40 1072 aa13.55□□□□□ -0.24
Scfd1-201ENSMUST00000021335 Nlrp6Q91WS2 869 aa13.4□□□□□ -0.27
Scfd1-201ENSMUST00000021335 Ehmt2Q9Z148 1263 aaKnown RBP13.38□□□□□ -0.27
Scfd1-201ENSMUST00000021335 Pde4cQ3UEI1 686 aa13.33□□□□□ -0.27
Scfd1-201ENSMUST00000021335 Cdca7Q9D0M2 382 aa13.32□□□□□ -0.28
Scfd1-201ENSMUST00000021335 AcrbpQ3V140 540 aa13.3□□□□□ -0.28
Scfd1-201ENSMUST00000021335 Bach1P97302 739 aa13.22□□□□□ -0.29
Scfd1-201ENSMUST00000021335 Tshz2Q68FE9 1030 aa13.07□□□□□ -0.32
Scfd1-201ENSMUST00000021335 Akt1s1Q9D1F4 257 aa12.98□□□□□ -0.33
Scfd1-201ENSMUST00000021335 Rtn4Q99P72 1162 aaKnown RBP12.95□□□□□ -0.34
Scfd1-201ENSMUST00000021335 ArsiQ32KI9 573 aa12.92□□□□□ -0.34
Scfd1-201ENSMUST00000021335 WdpcpQ8C456 722 aa12.89□□□□□ -0.35
Scfd1-201ENSMUST00000021335 Prm3Q62100 101 aa12.88□□□□□ -0.35
Scfd1-201ENSMUST00000021335 C1qtnf12Q8R2Z0 308 aa12.87□□□□□ -0.35
Scfd1-201ENSMUST00000021335 Slc34a2Q9DBP0 697 aa12.86□□□□□ -0.35
Scfd1-201ENSMUST00000021335 Riok3Q9DBU3 519 aaKnown RBP12.81□□□□□ -0.36
Scfd1-201ENSMUST00000021335 MyclP10166 368 aa12.73□□□□□ -0.37
Scfd1-201ENSMUST00000021335 Ms4a5Q810P8 197 aa12.73□□□□□ -0.37
Scfd1-201ENSMUST00000021335 Sox12Q04890 314 aa12.71□□□□□ -0.38
Scfd1-201ENSMUST00000021335 Styxl1Q9DAR2 321 aa12.69□□□□□ -0.38
Scfd1-201ENSMUST00000021335 Npm2Q80W85 207 aa12.68□□□□□ -0.38
Scfd1-201ENSMUST00000021335 Ecm2Q5FW85 670 aa12.61□□□□□ -0.39
Scfd1-201ENSMUST00000021335 Prdm10Q3UTQ7 1184 aa12.58□□□□□ -0.4
Scfd1-201ENSMUST00000021335 Trim41Q5NCC3 630 aa12.37□□□□□ -0.43
Scfd1-201ENSMUST00000021335 G430095P16RikE9Q913 147 aa12.34□□□□□ -0.43
Scfd1-201ENSMUST00000021335 Tcf3P15806 651 aa12.18□□□□□ -0.46
Scfd1-201ENSMUST00000021335 Zbtb7aO88939 569 aaKnown RBP12.17□□□□□ -0.46
Scfd1-201ENSMUST00000021335 Ifnlr1Q8CGK5 535 aa12.14□□□□□ -0.47
Scfd1-201ENSMUST00000021335 MpndQ3TV65 487 aa12.08□□□□□ -0.48
Scfd1-201ENSMUST00000021335 Egfem1Q8C088 590 aa12.06□□□□□ -0.48
Scfd1-201ENSMUST00000021335 Fbln2P37889 1221 aa11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Abcb7Q61102 752 aaKnown RBP11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Npm3Q9CPP0 175 aaKnown RBP11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Ppp1r37Q8BKR5 712 aa11.99□□□□□ -0.49
Scfd1-201ENSMUST00000021335 Grwd1Q810D6 446 aaKnown RBP11.91□□□□□ -0.5
Scfd1-201ENSMUST00000021335 Prdm16A2A935 1275 aa11.91□□□□□ -0.5
Scfd1-201ENSMUST00000021335 Gtpbp6Q3U6U5 514 aa11.9□□□□□ -0.51
Scfd1-201ENSMUST00000021335 Zbtb12Q9Z150 459 aa11.87□□□□□ -0.51
Scfd1-201ENSMUST00000021335 Ppp6r1Q7TSI3 856 aa11.83□□□□□ -0.52
Scfd1-201ENSMUST00000021335 CatipB9EKE5 520 aa11.76□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Arid3aQ62431 601 aa11.76□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Nkx1-1G3UXB3 402 aa11.74□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Taok2Q6ZQ29 1240 aa11.71□□□□□ -0.53
Scfd1-201ENSMUST00000021335 Rnf216P58283 853 aa11.69□□□□□ -0.54
Scfd1-201ENSMUST00000021335 Skida1Q80YR3 822 aa11.64□□□□□ -0.55
Scfd1-201ENSMUST00000021335 Skap1Q3UUV5 355 aa11.61□□□□□ -0.55
Scfd1-201ENSMUST00000021335 Zbtb22Q9Z0G7 638 aa11.58□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Jarid2Q62315 1234 aa11.56□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Lrrc43Q3V0L5 667 aa11.53□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Spock2Q9ER58 423 aa11.53□□□□□ -0.56
Scfd1-201ENSMUST00000021335 Znf704Q9ERQ3 566 aa11.51□□□□□ -0.57
Scfd1-201ENSMUST00000021335 Slc4a2P13808 1237 aaKnown RBP11.45□□□□□ -0.58
Scfd1-201ENSMUST00000021335 MycnP03966 462 aaKnown RBP11.43□□□□□ -0.58
Scfd1-201ENSMUST00000021335 Slc4a5E9Q3M5 1116 aa11.39□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Ferd3lQ923Z4 168 aa11.39□□□□□ -0.59
Scfd1-201ENSMUST00000021335 TimelessQ9R1X4 1197 aa11.39□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Fam117bQ3U3E2 584 aa11.37□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Repin1Q5U4E2 545 aa11.37□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Pde4dQ01063 747 aa11.36□□□□□ -0.59
Scfd1-201ENSMUST00000021335 Mkrn3Q60764 544 aa11.32□□□□□ -0.6
Scfd1-201ENSMUST00000021335 Esf1Q3V1V3 845 aaKnown RBP11.29□□□□□ -0.6
Scfd1-201ENSMUST00000021335 Hdac5Q9Z2V6 1113 aa11.26□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Sra1Q80VJ2 232 aa11.24□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Rgl2Q61193 778 aa11.23□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Noa1Q9JJG9 693 aaKnown RBP11.22□□□□□ -0.61
Scfd1-201ENSMUST00000021335 Pitpnm1O35954 1243 aa11.17□□□□□ -0.62
Scfd1-201ENSMUST00000021335 Trim35Q8C006 501 aa11.15□□□□□ -0.62
Scfd1-201ENSMUST00000021335 Zeb1Q64318 1117 aa11.15□□□□□ -0.63
Scfd1-201ENSMUST00000021335 Cadps2Q8BYR5 1297 aa11.1□□□□□ -0.63
Scfd1-201ENSMUST00000021335 Slc24a1Q91WD8 1130 aa11.09□□□□□ -0.63
Scfd1-201ENSMUST00000021335 UncxO08934 530 aa11.08□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Zbtb7bQ64321 544 aa11.08□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Stk3Q9JI10 497 aa11.08□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Nyap1Q6PFX7 833 aa11.05□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Gm13697A2AK42 830 aa11.04□□□□□ -0.64
Scfd1-201ENSMUST00000021335 Atad2Q8CDM1 1040 aa11.02□□□□□ -0.64
Scfd1-201ENSMUST00000021335 PygbQ8CI94 843 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms