RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 URC2Q04411 772 aa0.39□□□□□ -2.35
snR49snR49 ROY1Q04847 553 aa0.39□□□□□ -2.35
snR49snR49 MRX4Q12467 430 aa0.39□□□□□ -2.35
snR49snR49 RIM1P32445 135 aaKnown RBP0.38□□□□□ -2.35
snR49snR49 YKR015CP36111 568 aa0.38□□□□□ -2.35
snR49snR49 QDR3P38227 689 aa0.38□□□□□ -2.35
snR49snR49 SER3P40054 469 aa0.38□□□□□ -2.35
snR49snR49 DAN1P47178 298 aa0.38□□□□□ -2.35
snR49snR49 ERO1Q03103 563 aa0.38□□□□□ -2.35
snR49snR49 YDR341CQ05506 607 aaKnown RBP0.38□□□□□ -2.35
snR49snR49 YLH47Q06493 454 aa0.38□□□□□ -2.35
snR49snR49 NSE1Q07913 336 aa0.38□□□□□ -2.35
snR49snR49 SLM3Q12093 417 aa0.38□□□□□ -2.35
snR49snR49 YRF1-4O13559 1382 aa0.37□□□□□ -2.35
snR49snR49 YCR051WP25631 222 aa0.37□□□□□ -2.35
snR49snR49 CLB6P32943 380 aa0.37□□□□□ -2.35
snR49snR49 BYE1P36106 594 aa0.37□□□□□ -2.35
snR49snR49 ZTA1P38230 334 aaKnown RBP0.37□□□□□ -2.35
snR49snR49 SLM4P38247 162 aa0.37□□□□□ -2.35
snR49snR49 SUR7P54003 302 aa0.37□□□□□ -2.35
snR49snR49 SVL3Q03088 825 aaKnown RBP0.37□□□□□ -2.35
snR49snR49 MED1Q12321 566 aa0.37□□□□□ -2.35
snR49snR49 IES3Q12345 250 aa0.37□□□□□ -2.35
snR49snR49 PGA3Q12746 312 aaKnown RBP0.37□□□□□ -2.35
snR49snR49 RNA1P11745 407 aaKnown RBP0.36□□□□□ -2.35
snR49snR49 PHO80P20052 293 aa0.36□□□□□ -2.35
snR49snR49 IST2P38250 946 aa0.36□□□□□ -2.35
snR49snR49 MOB2P43563 287 aa0.36□□□□□ -2.35
snR49snR49 MIC19P43594 170 aa0.36□□□□□ -2.35
snR49snR49 SYF2P53277 215 aaPredicted RBP0.36□□□□□ -2.35
snR49snR49 MRP7P12687 371 aa0.35□□□□□ -2.35
snR49snR49 FAR1P21268 830 aa0.35□□□□□ -2.35
snR49snR49 REC107P21651 314 aa0.35□□□□□ -2.35
snR49snR49 NRP1P32770 719 aaKnown RBP RIP-Chip data0.35□□□□□ -2.35not detected
snR49snR49 YSC83P32792 385 aa0.35□□□□□ -2.35
snR49snR49 CTM1P38818 585 aa0.35□□□□□ -2.35
snR49snR49 YIL054WP40524 105 aa0.35□□□□□ -2.35
snR49snR49 YFR018CP43599 363 aa0.35□□□□□ -2.35
snR49snR49 MRPL19P53875 158 aa0.35□□□□□ -2.35
snR49snR49 YHR086W-AQ3E746 53 aa0.35□□□□□ -2.35
snR49snR49 AFI1Q99222 893 aa0.35□□□□□ -2.35
snR49snR49 VPS63O13549 108 aa0.34□□□□□ -2.36
snR49snR49 RED1P14291 827 aa0.34□□□□□ -2.36
snR49snR49 URA10P30402 227 aa0.34□□□□□ -2.36
snR49snR49 BNI5P53890 448 aaKnown RBP0.34□□□□□ -2.36
snR49snR49 TRM82Q03774 444 aa0.34□□□□□ -2.36
snR49snR49 UBX2Q04228 584 aa0.34□□□□□ -2.36
snR49snR49 RRP7P25368 297 aaPredicted RBP0.33□□□□□ -2.36
snR49snR49 NOP6Q07623 225 aaKnown RBP0.33□□□□□ -2.36
snR49snR49 ALE1Q08548 619 aa0.33□□□□□ -2.36
snR49snR49 VPS68Q12016 184 aa0.33□□□□□ -2.36
snR49snR49 AEP3Q12089 606 aa0.33□□□□□ -2.36
snR49snR49 MRPL20P22354 195 aaPredicted RBP0.32□□□□□ -2.36
snR49snR49 PHO91P27514 894 aa0.32□□□□□ -2.36
snR49snR49 ERV1P27882 189 aa0.32□□□□□ -2.36
snR49snR49 NAB3P38996 802 aaKnown RBP RIP-Chip data0.32□□□□□ -2.36not detected
snR49snR49 PAC11P40960 533 aa0.32□□□□□ -2.36
snR49snR49 DSK2P48510 373 aa0.32□□□□□ -2.36
snR49snR49 YGL118CP53132 145 aa0.32□□□□□ -2.36
snR49snR49 FMP48P53233 369 aa0.32□□□□□ -2.36
snR49snR49 DCR2Q05924 578 aa0.32□□□□□ -2.36
snR49snR49 YLR456WQ06199 204 aa0.32□□□□□ -2.36
snR49snR49 MRPL8P22353 238 aa0.31□□□□□ -2.36
snR49snR49 URA7P28274 579 aaKnown RBP0.31□□□□□ -2.36
snR49snR49 ITR2P30606 609 aa0.31□□□□□ -2.36
snR49snR49 YKL071WP36086 256 aa0.31□□□□□ -2.36
snR49snR49 RFT1P38206 574 aaPredicted RBP0.31□□□□□ -2.36
snR49snR49 FCY21P40039 528 aa0.31□□□□□ -2.36
snR49snR49 HIT1P46973 164 aa0.31□□□□□ -2.36
snR49snR49 MIG2P53035 382 aa0.31□□□□□ -2.36
snR49snR49 RTT102P53330 157 aa0.31□□□□□ -2.36
snR49snR49 TAF11Q04226 346 aa0.31□□□□□ -2.36
snR49snR49 RDS3Q06835 107 aaPredicted RBP0.31□□□□□ -2.36
snR49snR49 DET1Q99288 334 aaKnown RBP0.31□□□□□ -2.36
snR49snR49 FAD1P38913 306 aa0.3□□□□□ -2.36
snR49snR49 GPD2P41911 440 aaKnown RBP0.3□□□□□ -2.36
snR49snR49 SSU72P53538 206 aaPredicted RBP0.3□□□□□ -2.36
snR49snR49 SHS1Q07657 551 aa0.3□□□□□ -2.36
snR49snR49 RPN8Q08723 338 aaKnown RBP0.3□□□□□ -2.36
snR49snR49 NOC2P39744 710 aaKnown RBP0.29□□□□□ -2.36
snR49snR49 SLM1P40485 686 aa0.29□□□□□ -2.36
snR49snR49 YNL040WP53960 456 aaPredicted RBP0.29□□□□□ -2.36
snR49snR49 ACT1P60010 375 aaKnown RBP0.29□□□□□ -2.36
snR49snR49 UBA3Q99344 299 aa0.29□□□□□ -2.36
snR49snR49 CAB3P36076 571 aa0.28□□□□□ -2.36
snR49snR49 LSM4P40070 187 aaKnown RBP0.28□□□□□ -2.36
snR49snR49 PIR5P46999 287 aa0.28□□□□□ -2.36
snR49snR49 YMR166CQ03829 368 aa0.28□□□□□ -2.36
snR49snR49 AAD15Q08361 143 aa0.28□□□□□ -2.36
snR49snR49 CDC42P19073 191 aa0.27□□□□□ -2.37
snR49snR49 PRE7P23724 241 aaKnown RBP0.27□□□□□ -2.37
snR49snR49 PEX5P35056 612 aa0.27□□□□□ -2.37
snR49snR49 SMF2P38778 549 aa0.27□□□□□ -2.37
snR49snR49 YJL027CP47063 138 aaPredicted RBP0.27□□□□□ -2.37
snR49snR49 YJR146WP47174 117 aa0.27□□□□□ -2.37
snR49snR49 LSG1P53145 640 aaKnown RBP0.27□□□□□ -2.37
snR49snR49 RTS3P53289 263 aa0.27□□□□□ -2.37
snR49snR49 VPS72Q03388 795 aa0.27□□□□□ -2.37
snR49snR49 TAF10Q12030 206 aa0.27□□□□□ -2.37
snR49snR49 TY3A-GQ12173 290 aa0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms