RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	MMT1	Q03218	510 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	YET2	Q04210	160 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	YHC1	Q05900	231 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	IRC25	Q07951	179 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	LDS2	Q08218	356 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	HRT1	Q08273	121 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	SLF1	Q12034	447 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	SCM3	Q12334	223 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	PRM7	Q12459	698 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	YOR338W	Q99326	363 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	RPC40	P07703	335 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	DAP2	P18962	818 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	CMK2	P22517	447 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	DBR1	P24309	405 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	YCL068C	P25593	260 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.54	□□□□□ -2.32	not detected
BEM3	YPL115C	ADH5	P38113	351 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	YPT35	P38815	214 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	FET3	P38993	636 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	COX14	P39103	70 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	RPN14	P53196	417 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	CDH1	P53197	566 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	RQC1	Q05468	723 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	GAT3	Q07928	141 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	APC5	Q08683	685 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	SAM4	Q08985	325 aa	Known RBP	0.54	□□□□□ -2.32
BEM3	YPL115C	HMS1	Q12398	434 aa		0.54	□□□□□ -2.32
BEM3	YPL115C	SMC4	Q12267	1418 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	PUT4	P15380	627 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	RPB5	P20434	215 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	IME2	P32581	645 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	RAD23	P32628	398 aa	Known RBP	0.53	□□□□□ -2.32
BEM3	YPL115C	OM14	P38325	134 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	APE4	P38821	490 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	ATG7	P38862	630 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	CHL4	P38907	458 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	MAM33	P40513	266 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	AIP1	P46680	615 aa	Known RBP	0.53	□□□□□ -2.32
BEM3	YPL115C	URB2	P47108	1174 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	FSH2	Q05015	223 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	GAS2	Q06135	555 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	YLH47	Q06493	454 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	NAG1	Q8TGN9	163 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	MHP1	P43638	1398 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	SNT2	P53127	1403 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	VTH1	P40438	1549 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	VTH2	P40890	1549 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	CFT1	Q06632	1357 aa	Known RBP	0.53	□□□□□ -2.32
BEM3	YPL115C	HXT2	P23585	541 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	TOA2	P32774	122 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	MRPL37	P36532	105 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	LRP1	P38801	184 aa	Known RBP	0.53	□□□□□ -2.32
BEM3	YPL115C	UTP9	P38882	575 aa	Known RBP	0.53	□□□□□ -2.32
BEM3	YPL115C	PES4	P39684	611 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	YJL118W	P47022	219 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	RPL21A	Q02753	160 aa	Known RBP	0.53	□□□□□ -2.32
BEM3	YPL115C	URH1	Q04179	340 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	VTI1	Q04338	217 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	RIF2	Q06208	395 aa		0.53	□□□□□ -2.32
BEM3	YPL115C	VPS63	O13549	108 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	RPL18A	P0CX49	186 aa	Known RBP	0.53	□□□□□ -2.33
BEM3	YPL115C	RPL18B	P0CX50	186 aa	Known RBP	0.53	□□□□□ -2.33
BEM3	YPL115C	MSI1	P13712	422 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	SAG1	P20840	650 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	KRE2	P27809	442 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	GYP6	P32806	458 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	PDC2	P32896	925 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	CAJ1	P39101	391 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	TIM17	P39515	158 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	PRP39	P39682	629 aa	Known RBP	0.53	□□□□□ -2.33
BEM3	YPL115C	AIM24	P47127	394 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	ASN2	P49090	572 aa	Known RBP	0.53	□□□□□ -2.33
BEM3	YPL115C	YGL185C	P53100	379 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	MPS2	P53159	387 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	RRN9	P53437	365 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	DBP9	Q06218	594 aa	Known RBP	0.53	□□□□□ -2.33
BEM3	YPL115C	YPR091C	Q06833	770 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	SHS1	Q07657	551 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	YPL278C	Q08990	100 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	HSP42	Q12329	375 aa		0.53	□□□□□ -2.33
BEM3	YPL115C	YPS1	P32329	569 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	FRM2	P37261	193 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	YIA6	P40556	373 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	TOS3	P43637	560 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	BIO3	P50277	480 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	YGR016W	P53209	190 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	YNL050C	P53952	270 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	TAF12	Q03761	539 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	YMR244W	Q04018	355 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	RPN9	Q04062	393 aa	Known RBP	0.52	□□□□□ -2.33
BEM3	YPL115C	BTS1	Q12051	335 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	REX3	Q12090	404 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	YGK3	Q12222	375 aa	Predicted RBP	0.52	□□□□□ -2.33
BEM3	YPL115C	BRR1	Q99177	341 aa	Predicted RBP	0.52	□□□□□ -2.33
BEM3	YPL115C	UTP10	P42945	1769 aa	Known RBP	0.52	□□□□□ -2.33
BEM3	YPL115C	PIS1	P06197	220 aa	Known RBP	0.52	□□□□□ -2.33
BEM3	YPL115C	CDC50	P25656	391 aa		0.52	□□□□□ -2.33
BEM3	YPL115C	TPS2	P31688	896 aa	Known RBP	0.52	□□□□□ -2.33
BEM3	YPL115C	ASC1	P38011	319 aa	Known RBP	0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms