RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W TSA2Q04120 196 aa3.8□□□□□ -1.8
VPS28YPL065W VPS20Q04272 221 aa3.8□□□□□ -1.8
VPS28YPL065W YLR177WQ06251 628 aa3.8□□□□□ -1.8
VPS28YPL065W YOR376WQ08900 122 aa3.8□□□□□ -1.8
VPS28YPL065W RTC5Q12108 567 aaKnown RBP3.8□□□□□ -1.8
VPS28YPL065W FRE8Q12209 686 aa3.8□□□□□ -1.8
VPS28YPL065W SFM1Q12314 213 aa3.8□□□□□ -1.8
VPS28YPL065W YDR262WQ12331 272 aa3.8□□□□□ -1.8
VPS28YPL065W VPS63O13549 108 aa3.79□□□□□ -1.8
VPS28YPL065W BTT1P40314 149 aaPredicted RBP3.79□□□□□ -1.8
VPS28YPL065W IGD1P43598 195 aa3.79□□□□□ -1.8
VPS28YPL065W PGU1P47180 361 aa3.79□□□□□ -1.8
VPS28YPL065W SEH1P53011 349 aaKnown RBP3.79□□□□□ -1.8
VPS28YPL065W CWC22P53333 577 aaKnown RBP3.79□□□□□ -1.8
VPS28YPL065W GAS2Q06135 555 aa3.79□□□□□ -1.8
VPS28YPL065W COX4P04037 155 aa3.78□□□□□ -1.8
VPS28YPL065W CDC37P06101 506 aaKnown RBP3.78□□□□□ -1.8
VPS28YPL065W UNG1P12887 359 aa3.78□□□□□ -1.8
VPS28YPL065W MIR1P23641 311 aaKnown RBP3.78□□□□□ -1.8
VPS28YPL065W DEP1P31385 405 aa3.78□□□□□ -1.8
VPS28YPL065W RCK2P38623 610 aa3.78□□□□□ -1.8
VPS28YPL065W YDR089WP38966 869 aa3.78□□□□□ -1.8
VPS28YPL065W BUR2Q05949 395 aa3.78□□□□□ -1.8
VPS28YPL065W DNL4Q08387 944 aaPredicted RBP3.78□□□□□ -1.8
VPS28YPL065W MDY2Q12285 212 aa3.78□□□□□ -1.8
VPS28YPL065W RPL18AP0CX49 186 aaKnown RBP3.77□□□□□ -1.81
VPS28YPL065W RPL18BP0CX50 186 aaKnown RBP3.77□□□□□ -1.81
VPS28YPL065W HSP26P15992 214 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
VPS28YPL065W LDS1P31379 325 aa3.77□□□□□ -1.81
VPS28YPL065W PCH2P38126 564 aa3.77□□□□□ -1.81
VPS28YPL065W SSO2P39926 295 aa3.77□□□□□ -1.81
VPS28YPL065W AIM23P47015 356 aa3.77□□□□□ -1.81
VPS28YPL065W CDH1P53197 566 aa3.77□□□□□ -1.81
VPS28YPL065W APJ1P53940 528 aa3.77□□□□□ -1.81
VPS28YPL065W STE7P06784 515 aa3.76□□□□□ -1.81
VPS28YPL065W ERG9P29704 444 aa3.76□□□□□ -1.81
VPS28YPL065W YPS1P32329 569 aa3.76□□□□□ -1.81
VPS28YPL065W SOL2P37262 315 aa3.76□□□□□ -1.81
VPS28YPL065W MMS21P38632 267 aa3.76□□□□□ -1.81
VPS28YPL065W END3P39013 349 aa3.76□□□□□ -1.81
VPS28YPL065W ALD5P40047 520 aaKnown RBP3.76□□□□□ -1.81
VPS28YPL065W YNL320WP42840 284 aa3.76□□□□□ -1.81
VPS28YPL065W SUR7P54003 302 aa3.76□□□□□ -1.81
VPS28YPL065W MRPS16Q02608 121 aa3.76□□□□□ -1.81
VPS28YPL065W YDR115WQ04598 105 aa3.76□□□□□ -1.81
VPS28YPL065W RPN6Q12377 434 aa3.76□□□□□ -1.81
VPS28YPL065W CBP2P03874 630 aaPredicted RBP3.75□□□□□ -1.81
VPS28YPL065W TOA1P32773 286 aa3.75□□□□□ -1.81
VPS28YPL065W YBR241CP38142 488 aa3.75□□□□□ -1.81
VPS28YPL065W GPI18P38211 433 aa3.75□□□□□ -1.81
VPS28YPL065W SMF2P38778 549 aa3.75□□□□□ -1.81
VPS28YPL065W MOB2P43563 287 aa3.75□□□□□ -1.81
VPS28YPL065W BIO3P50277 480 aa3.75□□□□□ -1.81
VPS28YPL065W PXR1P53335 271 aaPredicted RBP3.75□□□□□ -1.81
VPS28YPL065W SLT2Q00772 484 aa3.75□□□□□ -1.81
VPS28YPL065W CAB5Q03941 241 aa3.75□□□□□ -1.81
VPS28YPL065W YLR297WQ05899 129 aa3.75□□□□□ -1.81
VPS28YPL065W DCC1P25559 380 aa3.74□□□□□ -1.81
VPS28YPL065W COS9P36034 407 aa3.74□□□□□ -1.81
VPS28YPL065W SWC5P38326 303 aa3.74□□□□□ -1.81
VPS28YPL065W YFR018CP43599 363 aa3.74□□□□□ -1.81
VPS28YPL065W YJR054WP47114 497 aa3.74□□□□□ -1.81
VPS28YPL065W TAF6P53040 516 aa3.74□□□□□ -1.81
VPS28YPL065W YGR015CP53208 328 aa3.74□□□□□ -1.81
VPS28YPL065W YGR168CP53293 376 aa3.74□□□□□ -1.81
VPS28YPL065W CUR1Q06469 252 aa3.74□□□□□ -1.81
VPS28YPL065W DDC1Q08949 612 aa3.74□□□□□ -1.81
VPS28YPL065W RPL21BQ12672 160 aaKnown RBP3.74□□□□□ -1.81
VPS28YPL065W SAL1D6W196 494 aa3.73□□□□□ -1.81
VPS28YPL065W VMA5P31412 392 aaKnown RBP3.73□□□□□ -1.81
VPS28YPL065W PDC2P32896 925 aa3.73□□□□□ -1.81
VPS28YPL065W YPS5P53057 165 aa3.73□□□□□ -1.81
VPS28YPL065W SCS7Q03529 384 aa3.73□□□□□ -1.81
VPS28YPL065W ALE1Q08548 619 aa3.73□□□□□ -1.81
VPS28YPL065W TAF10Q12030 206 aa3.73□□□□□ -1.81
VPS28YPL065W HIF1Q12373 385 aa3.73□□□□□ -1.81
VPS28YPL065W APC2Q12440 853 aa3.73□□□□□ -1.81
VPS28YPL065W PET18P25362 215 aa3.72□□□□□ -1.81
VPS28YPL065W BUD2P33314 1104 aa3.72□□□□□ -1.81
VPS28YPL065W MRPL27P36526 146 aaPredicted RBP3.72□□□□□ -1.81
VPS28YPL065W SHE1P38200 338 aa3.72□□□□□ -1.81
VPS28YPL065W BMT2P38278 337 aa3.72□□□□□ -1.81
VPS28YPL065W PEX22P39718 180 aa3.72□□□□□ -1.81
VPS28YPL065W YGL262WP53054 175 aa3.72□□□□□ -1.81
VPS28YPL065W VHT1P53241 593 aa3.72□□□□□ -1.81
VPS28YPL065W RNH201P53942 307 aa3.72□□□□□ -1.81
VPS28YPL065W RVB1Q03940 463 aaKnown RBP3.72□□□□□ -1.81
VPS28YPL065W PAA1Q12447 191 aaKnown RBP3.72□□□□□ -1.81
VPS28YPL065W FOL3Q12676 427 aaPredicted RBP3.72□□□□□ -1.81
VPS28YPL065W GCD2P12754 651 aaPredicted RBP3.71□□□□□ -1.82
VPS28YPL065W YKL162CP36052 402 aa3.71□□□□□ -1.82
VPS28YPL065W STB1P42845 420 aa3.71□□□□□ -1.82
VPS28YPL065W RIB4P50861 169 aaPredicted RBP3.71□□□□□ -1.82
VPS28YPL065W DBP6P53734 629 aaKnown RBP3.71□□□□□ -1.82
VPS28YPL065W YMR111CQ04461 462 aaPredicted RBP3.71□□□□□ -1.82
VPS28YPL065W SRO7Q12038 1033 aa3.71□□□□□ -1.82
VPS28YPL065W ADH1P00330 348 aaKnown RBP3.7□□□□□ -1.82
VPS28YPL065W DTR1P38125 572 aa3.7□□□□□ -1.82
VPS28YPL065W MNN9P39107 395 aaKnown RBP3.7□□□□□ -1.82
VPS28YPL065W UTP25P40498 721 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms