RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SSE1P32589 693 aaKnown RBP0.76□□□□□ -2.29
SGF11YPL047W VAM7P32912 316 aa0.76□□□□□ -2.29
SGF11YPL047W PPQ1P32945 549 aa0.76□□□□□ -2.29
SGF11YPL047W FAD1P38913 306 aa0.76□□□□□ -2.29
SGF11YPL047W SMC2P38989 1170 aaKnown RBP0.76□□□□□ -2.29
SGF11YPL047W MOB2P43563 287 aa0.76□□□□□ -2.29
SGF11YPL047W BUD13P46947 266 aaPredicted RBP0.76□□□□□ -2.29
SGF11YPL047W TRM82Q03774 444 aa0.76□□□□□ -2.29
SGF11YPL047W CSI1Q04368 295 aa0.76□□□□□ -2.29
SGF11YPL047W ECM19Q06011 112 aa0.76□□□□□ -2.29
SGF11YPL047W YLH47Q06493 454 aa0.76□□□□□ -2.29
SGF11YPL047W RLP24Q07915 199 aaKnown RBP0.76□□□□□ -2.29
SGF11YPL047W MMT2Q08970 484 aa0.76□□□□□ -2.29
SGF11YPL047W RRG1Q12167 365 aaPredicted RBP0.76□□□□□ -2.29
SGF11YPL047W SRN2Q99176 213 aa0.76□□□□□ -2.29
SGF11YPL047W FUR1P18562 216 aaKnown RBP0.75□□□□□ -2.29
SGF11YPL047W DAL81P21657 970 aa0.75□□□□□ -2.29
SGF11YPL047W RSA4P25382 515 aaKnown RBP0.75□□□□□ -2.29
SGF11YPL047W RPN12P32496 274 aa0.75□□□□□ -2.29
SGF11YPL047W IST2P38250 946 aa0.75□□□□□ -2.29
SGF11YPL047W YMR262WP38430 313 aa0.75□□□□□ -2.29
SGF11YPL047W LCP5P40079 357 aaPredicted RBP0.75□□□□□ -2.29
SGF11YPL047W PCL7P40186 285 aa0.75□□□□□ -2.29
SGF11YPL047W BUD27P43573 796 aaKnown RBP RIP-Chip data0.75□□□□□ -2.29not detected
SGF11YPL047W YFR045WP43617 309 aa0.75□□□□□ -2.29
SGF11YPL047W SHE4P51534 789 aa0.75□□□□□ -2.29
SGF11YPL047W NBP1P52919 319 aaPredicted RBP0.75□□□□□ -2.29
SGF11YPL047W RET3P53600 189 aa0.75□□□□□ -2.29
SGF11YPL047W UTP15Q04305 513 aaKnown RBP0.75□□□□□ -2.29
SGF11YPL047W GTO3Q04806 366 aa0.75□□□□□ -2.29
SGF11YPL047W PEX30Q06169 523 aa0.75□□□□□ -2.29
SGF11YPL047W IPK1Q06667 281 aa0.75□□□□□ -2.29
SGF11YPL047W SHS1Q07657 551 aa0.75□□□□□ -2.29
SGF11YPL047W YPL264CQ08980 353 aa0.75□□□□□ -2.29
SGF11YPL047W YPR063CQ12160 140 aa0.75□□□□□ -2.29
SGF11YPL047W RPN5Q12250 445 aaKnown RBP0.75□□□□□ -2.29
SGF11YPL047W DFM1Q12743 341 aaKnown RBP0.75□□□□□ -2.29
SGF11YPL047W UBA3Q99344 299 aa0.75□□□□□ -2.29
SGF11YPL047W VPS63O13549 108 aa0.74□□□□□ -2.29
SGF11YPL047W PDE2P06776 526 aa0.74□□□□□ -2.29
SGF11YPL047W CTA1P15202 515 aa0.74□□□□□ -2.29
SGF11YPL047W SNF6P18888 332 aa0.74□□□□□ -2.29
SGF11YPL047W RPB9P27999 122 aa0.74□□□□□ -2.29
SGF11YPL047W URA10P30402 227 aa0.74□□□□□ -2.29
SGF11YPL047W PEX5P35056 612 aa0.74□□□□□ -2.29
SGF11YPL047W YKR032WP36127 104 aa0.74□□□□□ -2.29
SGF11YPL047W TAE1P38340 232 aa0.74□□□□□ -2.29
SGF11YPL047W CTM1P38818 585 aa0.74□□□□□ -2.29
SGF11YPL047W ZIM17P42844 174 aa0.74□□□□□ -2.29
SGF11YPL047W MNN5P46982 586 aa0.74□□□□□ -2.29
SGF11YPL047W RGM1Q00453 211 aa0.74□□□□□ -2.29
SGF11YPL047W RMT2Q03305 412 aa0.74□□□□□ -2.29
SGF11YPL047W DCI1Q08558 271 aa0.74□□□□□ -2.29
SGF11YPL047W INH1P01097 85 aa0.73□□□□□ -2.29
SGF11YPL047W MET2P08465 486 aa0.73□□□□□ -2.29
SGF11YPL047W FAR1P21268 830 aa0.73□□□□□ -2.29
SGF11YPL047W YPS1P32329 569 aa0.73□□□□□ -2.29
SGF11YPL047W ARO4P32449 370 aaKnown RBP0.73□□□□□ -2.29
SGF11YPL047W YKL187CP34231 750 aa0.73□□□□□ -2.29
SGF11YPL047W JNM1P36224 373 aa0.73□□□□□ -2.29
SGF11YPL047W KAP104P38217 918 aaKnown RBP0.73□□□□□ -2.29
SGF11YPL047W RCK1P38622 512 aa0.73□□□□□ -2.29
SGF11YPL047W YHR177WP38867 453 aa0.73□□□□□ -2.29
SGF11YPL047W YHR182WP38870 785 aa0.73□□□□□ -2.29
SGF11YPL047W MLH1P38920 769 aa0.73□□□□□ -2.29
SGF11YPL047W LYS12P40495 371 aaKnown RBP0.73□□□□□ -2.29
SGF11YPL047W YIL054WP40524 105 aa0.73□□□□□ -2.29
SGF11YPL047W YFR018CP43599 363 aa0.73□□□□□ -2.29
SGF11YPL047W MEH1Q02205 184 aa0.73□□□□□ -2.29
SGF11YPL047W SPC19Q03954 165 aa0.73□□□□□ -2.29
SGF11YPL047W YDR222WQ04925 415 aa0.73□□□□□ -2.29
SGF11YPL047W ARR1Q06596 294 aa0.73□□□□□ -2.29
SGF11YPL047W YPR078CQ06813 372 aa0.73□□□□□ -2.29
SGF11YPL047W PLB3Q08108 686 aa0.73□□□□□ -2.29
SGF11YPL047W CLP1Q08685 445 aaPredicted RBP0.73□□□□□ -2.29
SGF11YPL047W DET1Q99288 334 aaKnown RBP0.73□□□□□ -2.29
SGF11YPL047W FLO11P08640 1367 aa0.72□□□□□ -2.29
SGF11YPL047W KRE1P17260 313 aa0.72□□□□□ -2.29
SGF11YPL047W ZRT3P34240 503 aa0.72□□□□□ -2.29
SGF11YPL047W YKL071WP36086 256 aa0.72□□□□□ -2.29
SGF11YPL047W SRP72P38688 640 aaKnown RBP0.72□□□□□ -2.29
SGF11YPL047W NAB3P38996 802 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
SGF11YPL047W YCH1P42937 148 aa0.72□□□□□ -2.29
SGF11YPL047W YPL080CQ02826 108 aa0.72□□□□□ -2.29
SGF11YPL047W MIX17Q03667 156 aa0.72□□□□□ -2.29
SGF11YPL047W RRB1Q04225 511 aaKnown RBP0.72□□□□□ -2.29
SGF11YPL047W SPH1Q06160 661 aa0.72□□□□□ -2.29
SGF11YPL047W YOR283WQ12040 230 aaKnown RBP0.72□□□□□ -2.29
SGF11YPL047W TRM10Q12400 293 aa0.72□□□□□ -2.29
SGF11YPL047W RPL1AP0CX43 217 aaKnown RBP0.71□□□□□ -2.3
SGF11YPL047W RPL1BP0CX44 217 aaKnown RBP0.71□□□□□ -2.3
SGF11YPL047W SAG1P20840 650 aa0.71□□□□□ -2.3
SGF11YPL047W GRR1P24814 1151 aa0.71□□□□□ -2.3
SGF11YPL047W ITR2P30606 609 aa0.71□□□□□ -2.3
SGF11YPL047W YBL081WP38180 368 aaKnown RBP0.71□□□□□ -2.3
SGF11YPL047W YBL028CP38202 106 aa0.71□□□□□ -2.3
SGF11YPL047W RFT1P38206 574 aaPredicted RBP0.71□□□□□ -2.3
SGF11YPL047W SPP381P38282 291 aaPredicted RBP0.71□□□□□ -2.3
SGF11YPL047W MNL1P38888 796 aa0.71□□□□□ -2.3
SGF11YPL047W ASG7P46993 209 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms