RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C MDJ1P35191 511 aa7.22□□□□□ -1.25
LSP1YPL004C SIC1P38634 284 aa7.22□□□□□ -1.25
LSP1YPL004C GPI16P38875 610 aa7.22□□□□□ -1.25
LSP1YPL004C SPO73P40031 143 aa7.22□□□□□ -1.25
LSP1YPL004C PRE6P40303 254 aaKnown RBP7.22□□□□□ -1.25
LSP1YPL004C YIL166CP40445 542 aa7.22□□□□□ -1.25
LSP1YPL004C REE1P40893 198 aa7.22□□□□□ -1.25
LSP1YPL004C GCN20P43535 752 aaKnown RBP7.22□□□□□ -1.25
LSP1YPL004C YJR142WP47173 342 aa7.22□□□□□ -1.25
LSP1YPL004C PRM8P53174 237 aa7.22□□□□□ -1.25
LSP1YPL004C YGR168CP53293 376 aa7.22□□□□□ -1.25
LSP1YPL004C BSC5P53755 489 aa7.22□□□□□ -1.25
LSP1YPL004C YSA1Q01976 231 aa7.22□□□□□ -1.25
LSP1YPL004C SDC1Q03323 175 aa7.22□□□□□ -1.25
LSP1YPL004C YPR127WQ06494 345 aa7.22□□□□□ -1.25
LSP1YPL004C FMP45Q07651 309 aa7.22□□□□□ -1.25
LSP1YPL004C SKI7Q08491 747 aaPredicted RBP7.22□□□□□ -1.25
LSP1YPL004C RSA1Q08932 381 aa7.22□□□□□ -1.25
LSP1YPL004C GRE1Q08969 168 aa7.22□□□□□ -1.25
LSP1YPL004C YDL109CQ12103 647 aa7.22□□□□□ -1.25
LSP1YPL004C RIB3Q99258 208 aa7.22□□□□□ -1.25
LSP1YPL004C SIR3P06701 978 aa7.21□□□□□ -1.26
LSP1YPL004C FBA1P14540 359 aaKnown RBP7.21□□□□□ -1.26
LSP1YPL004C SNC1P31109 117 aa7.21□□□□□ -1.26
LSP1YPL004C PUP2P32379 260 aa7.21□□□□□ -1.26
LSP1YPL004C TIM12P32830 109 aa7.21□□□□□ -1.26
LSP1YPL004C GPX1P36014 167 aa7.21□□□□□ -1.26
LSP1YPL004C YHR180WP38868 163 aa7.21□□□□□ -1.26
LSP1YPL004C SKN7P38889 622 aa7.21□□□□□ -1.26
LSP1YPL004C SNL1P40548 159 aa7.21□□□□□ -1.26
LSP1YPL004C PRY1P47032 299 aa7.21□□□□□ -1.26
LSP1YPL004C YJR098CP47139 656 aa7.21□□□□□ -1.26
LSP1YPL004C UTP21Q06078 939 aaPredicted RBP7.21□□□□□ -1.26
LSP1YPL004C TAF3Q12297 353 aa7.21□□□□□ -1.26
LSP1YPL004C FLO9P39712 1322 aa7.21□□□□□ -1.26
LSP1YPL004C PBS2P08018 668 aa7.2□□□□□ -1.26
LSP1YPL004C RPL43AP0CX25 92 aaKnown RBP7.2□□□□□ -1.26
LSP1YPL004C RPL43BP0CX26 92 aa7.2□□□□□ -1.26
LSP1YPL004C ATR1P13090 542 aa7.2□□□□□ -1.26
LSP1YPL004C AIM17P23180 465 aaKnown RBP7.2□□□□□ -1.26
LSP1YPL004C RHB1P25378 209 aa7.2□□□□□ -1.26
LSP1YPL004C UBC8P28263 218 aa7.2□□□□□ -1.26
LSP1YPL004C PTP2P29461 750 aa7.2□□□□□ -1.26
LSP1YPL004C ERG9P29704 444 aa7.2□□□□□ -1.26
LSP1YPL004C HIS7P33734 552 aaKnown RBP7.2□□□□□ -1.26
LSP1YPL004C APE4P38821 490 aa7.2□□□□□ -1.26
LSP1YPL004C THO1P40040 218 aaKnown RBP7.2□□□□□ -1.26
LSP1YPL004C COG3P40094 801 aa7.2□□□□□ -1.26
LSP1YPL004C YIL169CP40442 995 aa7.2□□□□□ -1.26
LSP1YPL004C BUD9P53226 547 aa7.2□□□□□ -1.26
LSP1YPL004C DAM1P53267 343 aa7.2□□□□□ -1.26
LSP1YPL004C RBG2P53295 368 aaKnown RBP7.2□□□□□ -1.26
LSP1YPL004C YPL039WQ03080 316 aa7.2□□□□□ -1.26
LSP1YPL004C GAS2Q06135 555 aa7.2□□□□□ -1.26
LSP1YPL004C HDA2Q06629 674 aa7.2□□□□□ -1.26
LSP1YPL004C MEU1Q07938 337 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
LSP1YPL004C NTG2Q08214 380 aa7.2□□□□□ -1.26
LSP1YPL004C HER1Q12276 1246 aa7.2□□□□□ -1.26
LSP1YPL004C YLR126CQ12288 251 aa7.2□□□□□ -1.26
LSP1YPL004C AIR2Q12476 344 aaKnown RBP7.2□□□□□ -1.26
LSP1YPL004C SFG1Q12507 346 aa7.2□□□□□ -1.26
LSP1YPL004C Q0144Q9ZZW2 109 aa7.2□□□□□ -1.26
LSP1YPL004C RPC40P07703 335 aaKnown RBP7.19□□□□□ -1.26
LSP1YPL004C YOL162WP0CF19 215 aa7.19□□□□□ -1.26
LSP1YPL004C HAP4P14064 554 aa7.19□□□□□ -1.26
LSP1YPL004C CTA1P15202 515 aa7.19□□□□□ -1.26
LSP1YPL004C HSP30P25619 332 aa7.19□□□□□ -1.26
LSP1YPL004C YEF1P32622 495 aa7.19□□□□□ -1.26
LSP1YPL004C TRS65P32893 560 aa7.19□□□□□ -1.26
LSP1YPL004C MDL1P33310 695 aa7.19□□□□□ -1.26
LSP1YPL004C SLC1P33333 303 aa7.19□□□□□ -1.26
LSP1YPL004C SLM4P38247 162 aa7.19□□□□□ -1.26
LSP1YPL004C APD1P38281 316 aa7.19□□□□□ -1.26
LSP1YPL004C CTF8P38877 133 aa7.19□□□□□ -1.26
LSP1YPL004C YAR028WP39548 234 aa7.19□□□□□ -1.26
LSP1YPL004C CHA4P43634 648 aa7.19□□□□□ -1.26
LSP1YPL004C SHE4P51534 789 aa7.19□□□□□ -1.26
LSP1YPL004C COX20Q04935 205 aa7.19□□□□□ -1.26
LSP1YPL004C YMR226CQ05016 267 aaKnown RBP7.19□□□□□ -1.26
LSP1YPL004C SNT309Q06091 175 aaPredicted RBP7.19□□□□□ -1.26
LSP1YPL004C DTD1Q07648 150 aaKnown RBP7.19□□□□□ -1.26
LSP1YPL004C RLM1Q12224 676 aa7.19□□□□□ -1.26
LSP1YPL004C PRS5Q12265 496 aaKnown RBP7.19□□□□□ -1.26
LSP1YPL004C CAR2P07991 424 aaKnown RBP7.18□□□□□ -1.26
LSP1YPL004C STE12P13574 688 aa7.18□□□□□ -1.26
LSP1YPL004C DPM1P14020 267 aaKnown RBP7.18□□□□□ -1.26
LSP1YPL004C PDX1P16451 410 aa7.18□□□□□ -1.26
LSP1YPL004C YPK2P18961 677 aa7.18□□□□□ -1.26
LSP1YPL004C PRP19P32523 503 aaKnown RBP7.18□□□□□ -1.26
LSP1YPL004C MSN4P33749 630 aa7.18□□□□□ -1.26
LSP1YPL004C JEN1P36035 616 aa7.18□□□□□ -1.26
LSP1YPL004C RPP1P38786 293 aa7.18□□□□□ -1.26
LSP1YPL004C SHO1P40073 367 aa7.18□□□□□ -1.26
LSP1YPL004C IDS2P46958 469 aa7.18□□□□□ -1.26
LSP1YPL004C YGR066CP53242 292 aa7.18□□□□□ -1.26
LSP1YPL004C OGG1P53397 376 aaPredicted RBP7.18□□□□□ -1.26
LSP1YPL004C MPP6P53725 186 aaPredicted RBP7.18□□□□□ -1.26
LSP1YPL004C YLR352WQ06479 807 aa7.18□□□□□ -1.26
LSP1YPL004C COQ10Q08058 207 aa7.18□□□□□ -1.26
LSP1YPL004C RDL2Q08742 149 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms