RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W APM1Q00776 475 aaPredicted RBP2.63□□□□□ -1.99
SIN3YOL004W SNZ1Q03148 297 aa2.63□□□□□ -1.99
SIN3YOL004W FMN1Q03778 218 aa2.63□□□□□ -1.99
SIN3YOL004W BNA7Q04066 261 aa2.63□□□□□ -1.99
SIN3YOL004W YLR281CQ05863 155 aa2.63□□□□□ -1.99
SIN3YOL004W MCH1Q07376 486 aa2.63□□□□□ -1.99
SIN3YOL004W MSH5Q12175 901 aa2.63□□□□□ -1.99
SIN3YOL004W UBX3Q12229 455 aa2.63□□□□□ -1.99
SIN3YOL004W POM34Q12445 299 aa2.63□□□□□ -1.99
SIN3YOL004W ARG1P22768 420 aa2.62□□□□□ -1.99
SIN3YOL004W CTS1P29029 562 aa2.62□□□□□ -1.99
SIN3YOL004W DOA4P32571 926 aa2.62□□□□□ -1.99
SIN3YOL004W OLA1P38219 394 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W LIN1P38852 340 aaPredicted RBP2.62□□□□□ -1.99
SIN3YOL004W MNN9P39107 395 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W IZH3Q07959 543 aa2.62□□□□□ -1.99
SIN3YOL004W MSA1Q08471 629 aa2.62□□□□□ -1.99
SIN3YOL004W MET32Q12041 191 aa2.62□□□□□ -1.99
SIN3YOL004W MRPL23Q12487 163 aaPredicted RBP2.62□□□□□ -1.99
SIN3YOL004W YPT6Q99260 215 aa2.62□□□□□ -1.99
SIN3YOL004W CDC23P16522 626 aa2.62□□□□□ -1.99
SIN3YOL004W SUA5P32579 426 aa2.62□□□□□ -1.99
SIN3YOL004W ECM31P38122 312 aa2.62□□□□□ -1.99
SIN3YOL004W MCX1P38323 520 aaPredicted RBP2.62□□□□□ -1.99
SIN3YOL004W PRY1P47032 299 aa2.62□□□□□ -1.99
SIN3YOL004W APT1P49435 187 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W TIM8P57744 87 aa2.62□□□□□ -1.99
SIN3YOL004W CDC14Q00684 551 aa2.62□□□□□ -1.99
SIN3YOL004W YPS7Q06325 596 aa2.62□□□□□ -1.99
SIN3YOL004W TIM9O74700 87 aa2.62□□□□□ -1.99
SIN3YOL004W RNR2P09938 399 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W ERD1P16151 362 aa2.62□□□□□ -1.99
SIN3YOL004W SOF1P33750 489 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W ATP3P38077 311 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W YJL206CP39529 758 aa2.62□□□□□ -1.99
SIN3YOL004W RIM8P53179 542 aa2.62□□□□□ -1.99
SIN3YOL004W MRPL50P53724 139 aa2.62□□□□□ -1.99
SIN3YOL004W YNR064CP53750 290 aa2.62□□□□□ -1.99
SIN3YOL004W YPL039WQ03080 316 aa2.62□□□□□ -1.99
SIN3YOL004W NHP10Q03435 203 aa2.62□□□□□ -1.99
SIN3YOL004W MUS81Q04149 632 aaPredicted RBP2.62□□□□□ -1.99
SIN3YOL004W DCR2Q05924 578 aa2.62□□□□□ -1.99
SIN3YOL004W DCS1Q06151 350 aa2.62□□□□□ -1.99
SIN3YOL004W GPN3Q06543 272 aa2.62□□□□□ -1.99
SIN3YOL004W YOL159C-AQ3E769 90 aa2.62□□□□□ -1.99
SIN3YOL004W RPL5P26321 297 aaKnown RBP2.62□□□□□ -1.99
SIN3YOL004W CLG1P35190 452 aa2.62□□□□□ -1.99
SIN3YOL004W ARN2P38724 620 aa2.62□□□□□ -1.99
SIN3YOL004W ECM1P39715 212 aa2.62□□□□□ -1.99
SIN3YOL004W MRX1P40050 688 aa2.62□□□□□ -1.99
SIN3YOL004W REE1P40893 198 aa2.62□□□□□ -1.99
SIN3YOL004W MPS3P47069 682 aa2.62□□□□□ -1.99
SIN3YOL004W YMR310CQ04867 317 aaPredicted RBP2.62□□□□□ -1.99
SIN3YOL004W RPI1P23250 407 aaKnown RBP2.61□□□□□ -1.99
SIN3YOL004W YSR3P23501 404 aa2.61□□□□□ -1.99
SIN3YOL004W DBP8P38719 431 aa2.61□□□□□ -1.99
SIN3YOL004W YRB2P40517 327 aa2.61□□□□□ -1.99
SIN3YOL004W CMC2Q3E7A4 109 aa2.61□□□□□ -1.99
SIN3YOL004W FLO9P39712 1322 aa2.61□□□□□ -1.99
SIN3YOL004W YSF3P0C074 85 aaPredicted RBP2.61□□□□□ -1.99
SIN3YOL004W CLN1P20437 546 aa2.61□□□□□ -1.99
SIN3YOL004W TAH1P25638 111 aaPredicted RBP2.61□□□□□ -1.99
SIN3YOL004W MTR2P34232 184 aaKnown RBP2.61□□□□□ -1.99
SIN3YOL004W OMA1P36163 345 aa2.61□□□□□ -1.99
SIN3YOL004W CHK1P38147 527 aa2.61□□□□□ -1.99
SIN3YOL004W SDP1P40479 209 aa2.61□□□□□ -1.99
SIN3YOL004W YFL064CP43540 174 aa2.61□□□□□ -1.99
SIN3YOL004W DPB11P47027 764 aaPredicted RBP2.61□□□□□ -1.99
SIN3YOL004W ASN2P49090 572 aaKnown RBP2.61□□□□□ -1.99
SIN3YOL004W COS1P53822 381 aa2.61□□□□□ -1.99
SIN3YOL004W IPI3P53877 555 aa2.61□□□□□ -1.99
SIN3YOL004W RRP17Q04031 235 aaPredicted RBP2.61□□□□□ -1.99
SIN3YOL004W GFD1Q04839 188 aaKnown RBP2.61□□□□□ -1.99
SIN3YOL004W YLR173WQ06247 608 aa2.61□□□□□ -1.99
SIN3YOL004W YPR202WQ08993 238 aa2.61□□□□□ -1.99
SIN3YOL004W HEM4P06174 275 aa2.61□□□□□ -1.99
SIN3YOL004W ERS1P17261 260 aa2.61□□□□□ -1.99
SIN3YOL004W PDB1P32473 366 aaKnown RBP2.61□□□□□ -1.99
SIN3YOL004W PET100P38958 111 aa2.61□□□□□ -1.99
SIN3YOL004W UTP18P40362 594 aaPredicted RBP2.61□□□□□ -1.99
SIN3YOL004W LAS21P40367 830 aa2.61□□□□□ -1.99
SIN3YOL004W ATM1P40416 690 aa2.61□□□□□ -1.99
SIN3YOL004W SNG1P46950 547 aa2.61□□□□□ -1.99
SIN3YOL004W CTK3P46963 296 aaPredicted RBP2.61□□□□□ -1.99
SIN3YOL004W MRS2Q01926 470 aa2.61□□□□□ -1.99
SIN3YOL004W SMA2Q04658 369 aa2.61□□□□□ -1.99
SIN3YOL004W YLR415CO13578 112 aa2.61□□□□□ -1.99
SIN3YOL004W NMT1P14743 455 aa2.61□□□□□ -1.99
SIN3YOL004W VPS1P21576 704 aaKnown RBP2.61□□□□□ -1.99
SIN3YOL004W MSN4P33749 630 aa2.61□□□□□ -1.99
SIN3YOL004W YBR096WP38256 230 aa2.61□□□□□ -1.99
SIN3YOL004W GRE3P38715 327 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SIN3YOL004W CTF8P38877 133 aa2.61□□□□□ -1.99
SIN3YOL004W YER130CP39959 443 aa2.61□□□□□ -1.99
SIN3YOL004W FMC1P40491 155 aa2.61□□□□□ -1.99
SIN3YOL004W CTK2P46962 323 aa2.61□□□□□ -1.99
SIN3YOL004W VOA1P53262 265 aa2.61□□□□□ -1.99
SIN3YOL004W ECM18Q04623 453 aa2.61□□□□□ -1.99
SIN3YOL004W YDL144CQ07589 356 aa2.61□□□□□ -1.99
SIN3YOL004W GSH2Q08220 491 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms