RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	MDY2	Q12285	212 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	EMP46	Q12396	444 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	RMD5	Q12508	421 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	YCR075W-A	Q3E830	75 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	Q0010	Q9ZZX9	128 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	ATP2	P00830	511 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	RAD1	P06777	1100 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CDC21	P06785	304 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CHS1	P08004	1131 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	PET54	P10834	293 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	NSP1	P14907	823 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	RPS5	P26783	225 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	YCR087C-A	P37263	153 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	TRS20	P38334	175 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	PFS1	P38872	237 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	YAL037W	P39728	267 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	ALG8	P40351	577 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	YPS6	P40583	537 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CIN1	P40987	1014 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	GAB1	P41733	394 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	OTU1	P43558	301 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	GTO1	P48239	356 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	PKP2	P53170	491 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	MRPL19	P53875	158 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	URH1	Q04179	340 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	PLM2	Q04383	521 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	NKP2	Q06162	153 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	PRP11	Q07350	266 aa	Predicted RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	TRE1	Q08919	783 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	ATP16	Q12165	160 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	YOR114W	Q12219	294 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	RRP42	Q12277	265 aa	Predicted RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	SFM1	Q12314	213 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	FRE7	Q12333	620 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	RRI1	Q12468	440 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	STF1	P01098	86 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	LEU4	P06208	619 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	RHO2	P06781	192 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	ADE5,7	P07244	802 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	PHO2	P07269	559 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	DST1	P07273	309 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	TOP3	P13099	656 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	PDC5	P16467	563 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	ESS1	P22696	170 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	ERG8	P24521	451 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	IMG1	P25626	169 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	SEC65	P29478	273 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	MUD1	P32605	298 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	KKQ8	P36004	724 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	YRO2	P38079	344 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	YBR241C	P38142	488 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	CTP1	P38152	299 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	FAT1	P38225	669 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	POP7	P38291	140 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	QNS1	P38795	714 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	LYS9	P38999	446 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	PSD1	P39006	500 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	SCS2	P40075	244 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	LRO1	P40345	661 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	TYW3	P53177	273 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	RBG2	P53295	368 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	MTG1	Q03151	367 aa	Predicted RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	YMR099C	Q03161	297 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	CTL1	Q03220	320 aa	Known RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	GPI17	Q04080	534 aa		1.4	□□□□□ -2.18
SSK2	YNR031C	PFK27	Q12471	397 aa	Predicted RBP	1.4	□□□□□ -2.18
SSK2	YNR031C	MSF1	P08425	469 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	PMR1	P13586	950 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	CBS1	P14066	229 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	VPS1	P21576	704 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	STE50	P25344	346 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	CTS1	P29029	562 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	PTP2	P29461	750 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	ERG9	P29704	444 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	COQ2	P32378	372 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	NUP2	P32499	720 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	UTR2	P32623	467 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	1.4	□□□□□ -2.19	not detected
SSK2	YNR031C	SUI1	P32911	108 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	PRS2	P38620	318 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	PHO90	P39535	881 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	YER188W	P40103	239 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	KHA1	P40309	873 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	SOK1	P40317	901 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	COS12	P53053	380 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	SHY1	P53266	389 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	YPL080C	Q02826	108 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	PEX25	Q02969	394 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	VPS38	Q05919	439 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	BER1	Q06688	274 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	HRD1	Q08109	551 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	DDC1	Q08949	612 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	PUS9	Q12069	462 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	TPO4	Q12256	659 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	JID1	Q12350	301 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	PRM4	Q12498	284 aa		1.4	□□□□□ -2.19
SSK2	YNR031C	GPM1	P00950	247 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	DED1	P06634	604 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	CMD1	P06787	147 aa	Known RBP	1.4	□□□□□ -2.19
SSK2	YNR031C	ASP3-2	P0CX77	362 aa		1.4	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms