RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C IZH2Q12442 317 aa2.94□□□□□ -1.94
WHI3YNL197C HEM4P06174 275 aa2.93□□□□□ -1.94
WHI3YNL197C RPL23AP0CX41 137 aaKnown RBP2.93□□□□□ -1.94
WHI3YNL197C RPL23BP0CX42 137 aaKnown RBP2.93□□□□□ -1.94
WHI3YNL197C RPS18AP0CX55 146 aaKnown RBP2.93□□□□□ -1.94
WHI3YNL197C RPS18BP0CX56 146 aaPredicted RBP2.93□□□□□ -1.94
WHI3YNL197C NAM2P11325 894 aa2.93□□□□□ -1.94
WHI3YNL197C MEK1P24719 497 aaPredicted RBP2.93□□□□□ -1.94
WHI3YNL197C SMF2P38778 549 aa2.93□□□□□ -1.94
WHI3YNL197C YHR131CP38835 850 aa2.93□□□□□ -1.94
WHI3YNL197C HAC1P41546 238 aa2.93□□□□□ -1.94
WHI3YNL197C YGR210CP42942 411 aa2.93□□□□□ -1.94
WHI3YNL197C YPI1P43587 155 aa2.93□□□□□ -1.94
WHI3YNL197C LOH1P47055 219 aa2.93□□□□□ -1.94
WHI3YNL197C CRH1P53301 507 aa2.93□□□□□ -1.94
WHI3YNL197C SUR7P54003 302 aa2.93□□□□□ -1.94
WHI3YNL197C TRM82Q03774 444 aa2.93□□□□□ -1.94
WHI3YNL197C LDB17Q12342 491 aa2.93□□□□□ -1.94
WHI3YNL197C YIL002W-AQ3E7Z5 69 aa2.93□□□□□ -1.94
WHI3YNL197C UBA3Q99344 299 aa2.93□□□□□ -1.94
WHI3YNL197C SAR1P20606 190 aaKnown RBP2.92□□□□□ -1.94
WHI3YNL197C ISY1P21374 235 aaPredicted RBP2.92□□□□□ -1.94
WHI3YNL197C DTR1P38125 572 aa2.92□□□□□ -1.94
WHI3YNL197C GTO1P48239 356 aa2.92□□□□□ -1.94
WHI3YNL197C OKP1P53298 406 aa2.92□□□□□ -1.94
WHI3YNL197C MKC7P53379 596 aa2.92□□□□□ -1.94
WHI3YNL197C REX2P54964 269 aaKnown RBP2.92□□□□□ -1.94
WHI3YNL197C UBX2Q04228 584 aa2.92□□□□□ -1.94
WHI3YNL197C APC4Q04601 652 aa2.92□□□□□ -1.94
WHI3YNL197C PLP2Q12017 286 aa2.92□□□□□ -1.94
WHI3YNL197C YDL109CQ12103 647 aa2.92□□□□□ -1.94
WHI3YNL197C CBS2P14905 389 aa2.92□□□□□ -1.94
WHI3YNL197C SWD3P38123 315 aa2.92□□□□□ -1.94
WHI3YNL197C BAT1P38891 393 aaKnown RBP2.92□□□□□ -1.94
WHI3YNL197C MND1P53102 219 aa2.92□□□□□ -1.94
WHI3YNL197C BIO4P53630 237 aa2.92□□□□□ -1.94
WHI3YNL197C VAC7P53950 1165 aa2.92□□□□□ -1.94
WHI3YNL197C MIR1P23641 311 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C RPT5P33297 434 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C RPC25P35718 212 aa2.91□□□□□ -1.94
WHI3YNL197C AIM10P39965 576 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C DSE1P40077 573 aa2.91□□□□□ -1.94
WHI3YNL197C YER186CP40101 306 aa2.91□□□□□ -1.94
WHI3YNL197C SLM1P40485 686 aa2.91□□□□□ -1.94
WHI3YNL197C CLD1P53264 445 aa2.91□□□□□ -1.94
WHI3YNL197C SCS7Q03529 384 aa2.91□□□□□ -1.94
WHI3YNL197C KAP95Q06142 861 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C IRC25Q07951 179 aa2.91□□□□□ -1.94
WHI3YNL197C HTZ1Q12692 134 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C RPS14AP06367 137 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C RPL5P26321 297 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C ACB1P31787 87 aa2.91□□□□□ -1.94
WHI3YNL197C RPS14BP39516 138 aaKnown RBP2.91□□□□□ -1.94
WHI3YNL197C BIR1P47134 954 aa2.91□□□□□ -1.94
WHI3YNL197C YMR027WQ04371 470 aa2.91□□□□□ -1.94
WHI3YNL197C RRG7Q08774 242 aaPredicted RBP2.91□□□□□ -1.94
WHI3YNL197C TAF10Q12030 206 aa2.91□□□□□ -1.94
WHI3YNL197C SFM1Q12314 213 aa2.91□□□□□ -1.94
WHI3YNL197C YPR1Q12458 312 aa2.91□□□□□ -1.94
WHI3YNL197C GPI12P23797 304 aa2.9□□□□□ -1.95
WHI3YNL197C ECT1P33412 323 aa2.9□□□□□ -1.95
WHI3YNL197C YFR057WP43625 151 aa2.9□□□□□ -1.95
WHI3YNL197C FMP33P46998 180 aa2.9□□□□□ -1.95
WHI3YNL197C SKI8Q02793 397 aaPredicted RBP2.9□□□□□ -1.95
WHI3YNL197C YPL080CQ02826 108 aa2.9□□□□□ -1.95
WHI3YNL197C YOR376WQ08900 122 aa2.9□□□□□ -1.95
WHI3YNL197C ATP16Q12165 160 aa2.9□□□□□ -1.95
WHI3YNL197C HRT3Q12347 344 aa2.9□□□□□ -1.95
WHI3YNL197C APC2Q12440 853 aa2.9□□□□□ -1.95
WHI3YNL197C NAG1Q8TGN9 163 aa2.9□□□□□ -1.95
WHI3YNL197C REP1P03871 373 aa2.89□□□□□ -1.95
WHI3YNL197C LSM12P38828 187 aaKnown RBP2.89□□□□□ -1.95
WHI3YNL197C PEX18P38855 283 aa2.89□□□□□ -1.95
WHI3YNL197C SCC4P40090 624 aa2.89□□□□□ -1.95
WHI3YNL197C BIO3P50277 480 aa2.89□□□□□ -1.95
WHI3YNL197C SEH1P53011 349 aaKnown RBP2.89□□□□□ -1.95
WHI3YNL197C DDC1Q08949 612 aa2.89□□□□□ -1.95
WHI3YNL197C FMP16Q12497 93 aa2.89□□□□□ -1.95
WHI3YNL197C SSA3P09435 649 aaKnown RBP2.89□□□□□ -1.95
WHI3YNL197C FRS2P15625 503 aaKnown RBP2.89□□□□□ -1.95
WHI3YNL197C MIG3P39943 394 aa2.89□□□□□ -1.95
WHI3YNL197C YNL260CP53846 198 aa2.89□□□□□ -1.95
WHI3YNL197C YET2Q04210 160 aa2.89□□□□□ -1.95
WHI3YNL197C YLR012CQ07927 99 aa2.89□□□□□ -1.95
WHI3YNL197C TDH1P00360 332 aaKnown RBP2.88□□□□□ -1.95
WHI3YNL197C RBK1P25332 333 aa2.88□□□□□ -1.95
WHI3YNL197C GIT1P25346 518 aa2.88□□□□□ -1.95
WHI3YNL197C OXA1P39952 402 aa2.88□□□□□ -1.95
WHI3YNL197C YNL208WP40159 199 aaKnown RBP2.88□□□□□ -1.95
WHI3YNL197C UTP18P40362 594 aaPredicted RBP2.88□□□□□ -1.95
WHI3YNL197C DFG10P40526 253 aa2.88□□□□□ -1.95
WHI3YNL197C YNL320WP42840 284 aa2.88□□□□□ -1.95
WHI3YNL197C AIM23P47015 356 aa2.88□□□□□ -1.95
WHI3YNL197C PRP38Q00723 242 aaPredicted RBP2.88□□□□□ -1.95
WHI3YNL197C RRT8Q08219 342 aa2.88□□□□□ -1.95
WHI3YNL197C APC9Q12107 265 aa2.88□□□□□ -1.95
WHI3YNL197C SIA1Q12212 622 aa2.88□□□□□ -1.95
WHI3YNL197C RBD2Q12270 262 aa2.88□□□□□ -1.95
WHI3YNL197C STE2D6VTK4 431 aa2.87□□□□□ -1.95
WHI3YNL197C PRB1P09232 635 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms