RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeastyeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP2YNL088W GOS1P38736 223 aa2.34□□□□□ -2.04
TOP2YNL088W YHR177WP38867 453 aa2.34□□□□□ -2.04
TOP2YNL088W CIN4P39110 191 aa2.34□□□□□ -2.04
TOP2YNL088W BMT5P40493 336 aa2.34□□□□□ -2.04
TOP2YNL088W YFL054CP43549 646 aa2.34□□□□□ -2.04
TOP2YNL088W ADO1P47143 340 aaKnown RBP2.34□□□□□ -2.04
TOP2YNL088W NUP49Q02199 472 aa2.34□□□□□ -2.04
TOP2YNL088W GIP3Q03016 1276 aa2.34□□□□□ -2.04
TOP2YNL088W SSY1Q03770 852 aa2.34□□□□□ -2.04
TOP2YNL088W PPR1P07272 904 aaPredicted RBP2.33□□□□□ -2.04
TOP2YNL088W RPL31BP0C2H9 113 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W NAM2P11325 894 aa2.33□□□□□ -2.04
TOP2YNL088W SGV1P23293 657 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W EHD3P28817 500 aa2.33□□□□□ -2.04
TOP2YNL088W TFC1P32367 649 aa2.33□□□□□ -2.04
TOP2YNL088W QDR3P38227 689 aa2.33□□□□□ -2.04
TOP2YNL088W POP4P38336 279 aa2.33□□□□□ -2.04
TOP2YNL088W SSN3P39073 555 aa2.33□□□□□ -2.04
TOP2YNL088W DHH1P39517 506 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W RRG9P40156 214 aa2.33□□□□□ -2.04
TOP2YNL088W PSA1P41940 361 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W FMP32P43557 207 aa2.33□□□□□ -2.04
TOP2YNL088W YJR030CP47101 745 aa2.33□□□□□ -2.04
TOP2YNL088W YDL186WP48568 277 aa2.33□□□□□ -2.04
TOP2YNL088W MTC3P53077 123 aa2.33□□□□□ -2.04
TOP2YNL088W COS6P53344 381 aa2.33□□□□□ -2.04
TOP2YNL088W ASI2P53895 289 aa2.33□□□□□ -2.04
TOP2YNL088W COG5P53951 403 aa2.33□□□□□ -2.04
TOP2YNL088W ABF2Q02486 183 aa2.33□□□□□ -2.04
TOP2YNL088W TPO3Q06451 622 aa2.33□□□□□ -2.04
TOP2YNL088W USB1Q12208 290 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W JLP1Q12358 412 aa2.33□□□□□ -2.04
TOP2YNL088W ERP3Q12403 225 aa2.33□□□□□ -2.04
TOP2YNL088W SLO1Q3E784 85 aa2.33□□□□□ -2.04
TOP2YNL088W RGS2Q99188 309 aa2.33□□□□□ -2.04
TOP2YNL088W HIS1P00498 297 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W SNF5P18480 905 aa2.33□□□□□ -2.04
TOP2YNL088W MRPS28P21771 286 aa2.33□□□□□ -2.04
TOP2YNL088W RNA14P25298 677 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W DCC1P25559 380 aa2.33□□□□□ -2.04
TOP2YNL088W MSS1P32559 526 aaPredicted RBP2.33□□□□□ -2.04
TOP2YNL088W YGL015CP33199 130 aa2.33□□□□□ -2.04
TOP2YNL088W PRS3P38689 320 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W IMD2P38697 523 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W RBG1P39729 369 aa2.33□□□□□ -2.04
TOP2YNL088W OXA1P39952 402 aa2.33□□□□□ -2.04
TOP2YNL088W MTR3P48240 250 aaPredicted RBP2.33□□□□□ -2.04
TOP2YNL088W LYS20P48570 428 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W PRP24P49960 444 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W VEL1P53058 206 aa2.33□□□□□ -2.04
TOP2YNL088W DID2P69771 204 aa2.33□□□□□ -2.04
TOP2YNL088W POS5Q06892 414 aa2.33□□□□□ -2.04
TOP2YNL088W YOR387CQ08910 206 aa2.33□□□□□ -2.04
TOP2YNL088W AIM41Q12032 185 aa2.33□□□□□ -2.04
TOP2YNL088W APC9Q12107 265 aa2.33□□□□□ -2.04
TOP2YNL088W YOR304C-AO14468 76 aa2.33□□□□□ -2.04
TOP2YNL088W RPL28P02406 149 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W PET9P18239 318 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W SLY1P22213 666 aa2.33□□□□□ -2.04
TOP2YNL088W SEC22P22214 214 aa2.33□□□□□ -2.04
TOP2YNL088W LRE1P25579 583 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W SGE1P33335 543 aa2.33□□□□□ -2.04
TOP2YNL088W YKL162CP36052 402 aa2.33□□□□□ -2.04
TOP2YNL088W EFM1P38732 585 aa2.33□□□□□ -2.04
TOP2YNL088W LSM12P38828 187 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W VPS52P39904 641 aa2.33□□□□□ -2.04
TOP2YNL088W IDP2P41939 412 aa2.33□□□□□ -2.04
TOP2YNL088W UFD1P53044 361 aa2.33□□□□□ -2.04
TOP2YNL088W YDR209CQ03480 137 aa2.33□□□□□ -2.04
TOP2YNL088W DPP1Q05521 289 aa2.33□□□□□ -2.04
TOP2YNL088W YDR278CQ05612 105 aa2.33□□□□□ -2.04
TOP2YNL088W HRD3Q05787 833 aa2.33□□□□□ -2.04
TOP2YNL088W BER1Q06688 274 aaKnown RBP2.33□□□□□ -2.04
TOP2YNL088W MRH1Q12117 320 aaPredicted RBP2.33□□□□□ -2.04
TOP2YNL088W COX3P00420 269 aa2.32□□□□□ -2.04
TOP2YNL088W YML003WP0CF16 290 aa2.32□□□□□ -2.04
TOP2YNL088W HCM1P25364 564 aa2.32□□□□□ -2.04
TOP2YNL088W POP5P28005 173 aa2.32□□□□□ -2.04
TOP2YNL088W GAC1P28006 793 aa2.32□□□□□ -2.04
TOP2YNL088W RTG1P32607 177 aa2.32□□□□□ -2.04
TOP2YNL088W SOF1P33750 489 aaKnown RBP2.32□□□□□ -2.04
TOP2YNL088W MRX3P38172 270 aa2.32□□□□□ -2.04
TOP2YNL088W CRG1P38892 291 aaRIP-Chip data2.32□□□□□ -2.04not detected
TOP2YNL088W PDS1P40316 373 aaPredicted RBP2.32□□□□□ -2.04
TOP2YNL088W YGR210CP42942 411 aa2.32□□□□□ -2.04
TOP2YNL088W TRS85P46944 698 aa2.32□□□□□ -2.04
TOP2YNL088W MDM30Q05930 598 aa2.32□□□□□ -2.04
TOP2YNL088W MHR1Q06630 226 aa2.32□□□□□ -2.04
TOP2YNL088W IPP1P00817 287 aaKnown RBP2.32□□□□□ -2.04
TOP2YNL088W MSK1P32048 576 aa2.32□□□□□ -2.04
TOP2YNL088W MYO3P36006 1272 aa2.32□□□□□ -2.04
TOP2YNL088W GMH1P36125 273 aa2.32□□□□□ -2.04
TOP2YNL088W TVP38P36164 337 aa2.32□□□□□ -2.04
TOP2YNL088W AHP1P38013 176 aaKnown RBP2.32□□□□□ -2.04
TOP2YNL088W PRE3P38624 215 aa2.32□□□□□ -2.04
TOP2YNL088W PCF11P39081 626 aaPredicted RBP2.32□□□□□ -2.04
TOP2YNL088W YIL108WP40483 696 aaKnown RBP2.32□□□□□ -2.04
TOP2YNL088W PAC11P40960 533 aa2.32□□□□□ -2.04
TOP2YNL088W SSY5P47002 699 aa2.32□□□□□ -2.04
TOP2YNL088W SAE3P89114 91 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms