RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C ALE1Q08548 619 aa1.97□□□□□ -2.09
UBX4YMR067C SLM3Q12093 417 aa1.97□□□□□ -2.09
UBX4YMR067C SMC6Q12749 1114 aa1.97□□□□□ -2.09
UBX4YMR067C CUP2P15315 225 aa1.96□□□□□ -2.1
UBX4YMR067C LCP5P40079 357 aaPredicted RBP1.96□□□□□ -2.1
UBX4YMR067C YML6P51998 286 aa1.96□□□□□ -2.1
UBX4YMR067C SMD1Q02260 146 aaPredicted RBP1.96□□□□□ -2.1
UBX4YMR067C TRM82Q03774 444 aa1.96□□□□□ -2.1
UBX4YMR067C RPN8Q08723 338 aaKnown RBP1.96□□□□□ -2.1
UBX4YMR067C FLO11P08640 1367 aa1.96□□□□□ -2.1
UBX4YMR067C YBL028CP38202 106 aa1.95□□□□□ -2.1
UBX4YMR067C YPT35P38815 214 aaKnown RBP1.95□□□□□ -2.1
UBX4YMR067C YJR030CP47101 745 aa1.95□□□□□ -2.1
UBX4YMR067C SCS7Q03529 384 aa1.95□□□□□ -2.1
UBX4YMR067C YPR078CQ06813 372 aa1.95□□□□□ -2.1
UBX4YMR067C FRE8Q12209 686 aa1.95□□□□□ -2.1
UBX4YMR067C DET1Q99288 334 aaKnown RBP1.95□□□□□ -2.1
UBX4YMR067C SAL1D6W196 494 aa1.94□□□□□ -2.1
UBX4YMR067C DAL5P15365 543 aa1.94□□□□□ -2.1
UBX4YMR067C COX10P21592 462 aa1.94□□□□□ -2.1
UBX4YMR067C URA10P30402 227 aa1.94□□□□□ -2.1
UBX4YMR067C YKL071WP36086 256 aa1.94□□□□□ -2.1
UBX4YMR067C YJL055WP47044 245 aa1.94□□□□□ -2.1
UBX4YMR067C GYL1Q04322 720 aa1.94□□□□□ -2.1
UBX4YMR067C YDL211CQ12121 372 aa1.94□□□□□ -2.1
UBX4YMR067C YDR018CQ12185 396 aa1.94□□□□□ -2.1
UBX4YMR067C CPT1P17898 393 aa1.93□□□□□ -2.1
UBX4YMR067C FAR1P21268 830 aa1.93□□□□□ -2.1
UBX4YMR067C PSO2P30620 661 aa1.93□□□□□ -2.1
UBX4YMR067C MSK1P32048 576 aa1.93□□□□□ -2.1
UBX4YMR067C UTR5P32630 166 aa1.93□□□□□ -2.1
UBX4YMR067C YNL320WP42840 284 aa1.93□□□□□ -2.1
UBX4YMR067C UTP15Q04305 513 aaKnown RBP1.93□□□□□ -2.1
UBX4YMR067C DIB1Q06819 143 aaPredicted RBP1.93□□□□□ -2.1
UBX4YMR067C YFH1Q07540 174 aa1.93□□□□□ -2.1
UBX4YMR067C RPS14AP06367 137 aaKnown RBP1.92□□□□□ -2.1
UBX4YMR067C SCH9P11792 824 aaKnown RBP1.92□□□□□ -2.1
UBX4YMR067C TAE1P38340 232 aa1.92□□□□□ -2.1
UBX4YMR067C YMR262WP38430 313 aa1.92□□□□□ -2.1
UBX4YMR067C RPS14BP39516 138 aaKnown RBP1.92□□□□□ -2.1
UBX4YMR067C SCC4P40090 624 aa1.92□□□□□ -2.1
UBX4YMR067C LCB2P40970 561 aa1.92□□□□□ -2.1
UBX4YMR067C YFR018CP43599 363 aa1.92□□□□□ -2.1
UBX4YMR067C MLC1P53141 149 aa1.92□□□□□ -2.1
UBX4YMR067C LST7P53237 242 aa1.92□□□□□ -2.1
UBX4YMR067C VPS63O13549 108 aa1.91□□□□□ -2.1
UBX4YMR067C RPS23AP0CX29 145 aaKnown RBP1.91□□□□□ -2.1
UBX4YMR067C RPS23BP0CX30 145 aa1.91□□□□□ -2.1
UBX4YMR067C DBR1P24309 405 aaKnown RBP1.91□□□□□ -2.1
UBX4YMR067C VMA8P32610 256 aaKnown RBP1.91□□□□□ -2.1
UBX4YMR067C SDH4P37298 181 aa1.91□□□□□ -2.1
UBX4YMR067C PCH2P38126 564 aa1.91□□□□□ -2.1
UBX4YMR067C GDT1P38301 280 aaPredicted RBP1.91□□□□□ -2.1
UBX4YMR067C EFM4P40516 257 aa1.91□□□□□ -2.1
UBX4YMR067C MIC19P43594 170 aa1.91□□□□□ -2.1
UBX4YMR067C MPS2P53159 387 aa1.91□□□□□ -2.1
UBX4YMR067C SXM1Q04175 944 aaKnown RBP1.91□□□□□ -2.1
UBX4YMR067C YOL075CQ08234 1294 aa1.91□□□□□ -2.1
UBX4YMR067C PEX27Q08580 376 aa1.91□□□□□ -2.1
UBX4YMR067C HPR1P17629 752 aaKnown RBP1.9□□□□□ -2.11
UBX4YMR067C ALK2P32789 676 aaPredicted RBP1.9□□□□□ -2.11
UBX4YMR067C TKL2P33315 681 aa1.9□□□□□ -2.11
UBX4YMR067C PXA2P34230 853 aa1.9□□□□□ -2.11
UBX4YMR067C ECM14P38836 430 aa1.9□□□□□ -2.11
UBX4YMR067C RRG9P40156 214 aa1.9□□□□□ -2.11
UBX4YMR067C NRM1P53718 249 aa1.9□□□□□ -2.11
UBX4YMR067C RRB1Q04225 511 aaKnown RBP1.9□□□□□ -2.11
UBX4YMR067C CSI1Q04368 295 aa1.9□□□□□ -2.11
UBX4YMR067C PRP46Q12417 451 aaPredicted RBP1.9□□□□□ -2.11
UBX4YMR067C DFM1Q12743 341 aaKnown RBP1.9□□□□□ -2.11
UBX4YMR067C RPS16AP0CX51 143 aaKnown RBP1.89□□□□□ -2.11
UBX4YMR067C RPS16BP0CX52 143 aaKnown RBP1.89□□□□□ -2.11
UBX4YMR067C SNL1P40548 159 aa1.89□□□□□ -2.11
UBX4YMR067C EPL1P43572 832 aa1.89□□□□□ -2.11
UBX4YMR067C HSH155P49955 971 aaKnown RBP1.89□□□□□ -2.11
UBX4YMR067C ECM19Q06011 112 aa1.89□□□□□ -2.11
UBX4YMR067C FSH3Q99369 266 aa1.89□□□□□ -2.11
UBX4YMR067C GRR1P24814 1151 aa1.88□□□□□ -2.11
UBX4YMR067C ITR2P30606 609 aa1.88□□□□□ -2.11
UBX4YMR067C PPQ1P32945 549 aa1.88□□□□□ -2.11
UBX4YMR067C IST2P38250 946 aa1.88□□□□□ -2.11
UBX4YMR067C RCK1P38622 512 aa1.88□□□□□ -2.11
UBX4YMR067C YIL054WP40524 105 aa1.88□□□□□ -2.11
UBX4YMR067C BUD13P46947 266 aaPredicted RBP1.88□□□□□ -2.11
UBX4YMR067C HIT1P46973 164 aa1.88□□□□□ -2.11
UBX4YMR067C LSG1P53145 640 aaKnown RBP1.88□□□□□ -2.11
UBX4YMR067C AIM33Q04516 312 aa1.88□□□□□ -2.11
UBX4YMR067C YPR063CQ12160 140 aa1.88□□□□□ -2.11
UBX4YMR067C RPL6BP05739 176 aaKnown RBP1.87□□□□□ -2.11
UBX4YMR067C ARF2P19146 181 aaKnown RBP1.87□□□□□ -2.11
UBX4YMR067C INO2P26798 304 aa1.87□□□□□ -2.11
UBX4YMR067C MDL1P33310 695 aa1.87□□□□□ -2.11
UBX4YMR067C MED8P38304 223 aa1.87□□□□□ -2.11
UBX4YMR067C YGL088WP53151 121 aa1.87□□□□□ -2.11
UBX4YMR067C RPL6AQ02326 176 aaKnown RBP1.87□□□□□ -2.11
UBX4YMR067C YPL113CQ02961 396 aa1.87□□□□□ -2.11
UBX4YMR067C INP1Q03694 420 aa1.87□□□□□ -2.11
UBX4YMR067C CSM3Q04659 317 aa1.87□□□□□ -2.11
UBX4YMR067C SGT2Q12118 346 aaKnown RBP1.87□□□□□ -2.11
UBX4YMR067C AIM45Q12480 344 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms