RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C PPN1Q04119 674 aa4.73□□□□□ -1.65
SEC39YLR440C GMC1Q04399 608 aa4.73□□□□□ -1.65
SEC39YLR440C DPP1Q05521 289 aa4.73□□□□□ -1.65
SEC39YLR440C YPR078CQ06813 372 aa4.73□□□□□ -1.65
SEC39YLR440C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
SEC39YLR440C YOR029WQ12243 111 aa4.73□□□□□ -1.65
SEC39YLR440C YOR111WQ99210 232 aa4.73□□□□□ -1.65
SEC39YLR440C GSC2P40989 1895 aa4.72□□□□□ -1.65
SEC39YLR440C ILV5P06168 395 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C MRP13P12686 339 aa4.72□□□□□ -1.65
SEC39YLR440C DPM1P14020 267 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C MRPL44P19956 98 aa4.72□□□□□ -1.65
SEC39YLR440C SPO11P23179 398 aa4.72□□□□□ -1.65
SEC39YLR440C SGV1P23293 657 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C GBP2P25555 427 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
SEC39YLR440C UGX2P32772 223 aa4.72□□□□□ -1.65
SEC39YLR440C ADD66P36040 267 aa4.72□□□□□ -1.65
SEC39YLR440C UTP30P36144 274 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C DRE2P36152 348 aa4.72□□□□□ -1.65
SEC39YLR440C YPK3P38070 525 aa4.72□□□□□ -1.65
SEC39YLR440C ARA1P38115 344 aa4.72□□□□□ -1.65
SEC39YLR440C OXA1P39952 402 aa4.72□□□□□ -1.65
SEC39YLR440C TAH11P47112 604 aa4.72□□□□□ -1.65
SEC39YLR440C YPT11P48559 417 aa4.72□□□□□ -1.65
SEC39YLR440C MAL13P53338 473 aa4.72□□□□□ -1.65
SEC39YLR440C TRM112P53738 135 aaPredicted RBP4.72□□□□□ -1.65
SEC39YLR440C SDH1Q00711 640 aa4.72□□□□□ -1.65
SEC39YLR440C SDH7Q04401 133 aa4.72□□□□□ -1.65
SEC39YLR440C YML096WQ04489 525 aa4.72□□□□□ -1.65
SEC39YLR440C YLR225CQ05948 407 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C IWR1Q07532 353 aaPredicted RBP4.72□□□□□ -1.65
SEC39YLR440C THI72Q08579 599 aa4.72□□□□□ -1.65
SEC39YLR440C NBP2Q12163 236 aa4.72□□□□□ -1.65
SEC39YLR440C RUP1Q12242 671 aa4.72□□□□□ -1.65
SEC39YLR440C RKM5Q12367 367 aa4.72□□□□□ -1.65
SEC39YLR440C YBR298C-AQ8TGK4 73 aa4.72□□□□□ -1.65
SEC39YLR440C HTS1P07263 546 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C ASP3-2P0CX77 362 aa4.72□□□□□ -1.65
SEC39YLR440C ASP3-3P0CX78 362 aa4.72□□□□□ -1.65
SEC39YLR440C ASP3-4P0CX79 362 aa4.72□□□□□ -1.65
SEC39YLR440C ASP3-1P0CZ17 362 aa4.72□□□□□ -1.65
SEC39YLR440C PHO13P19881 312 aa4.72□□□□□ -1.65
SEC39YLR440C YSR3P23501 404 aa4.72□□□□□ -1.65
SEC39YLR440C SUA7P29055 345 aaPredicted RBP4.72□□□□□ -1.65
SEC39YLR440C TRR1P29509 319 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C SRB5P32585 307 aa4.72□□□□□ -1.65
SEC39YLR440C MDL2P33311 773 aa4.72□□□□□ -1.65
SEC39YLR440C PIN4P34217 668 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
SEC39YLR440C MRPL36P36531 177 aa4.72□□□□□ -1.65
SEC39YLR440C CST26P38226 397 aa4.72□□□□□ -1.65
SEC39YLR440C VID24P38263 362 aa4.72□□□□□ -1.65
SEC39YLR440C YPT31P38555 223 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C MIP6P38760 659 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C FIR1P40020 876 aa4.72□□□□□ -1.65
SEC39YLR440C RFC2P40348 353 aa4.72□□□□□ -1.65
SEC39YLR440C SDP1P40479 209 aa4.72□□□□□ -1.65
SEC39YLR440C RPL10P41805 221 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C PFA3P42836 336 aa4.72□□□□□ -1.65
SEC39YLR440C YJL118WP47022 219 aa4.72□□□□□ -1.65
SEC39YLR440C AIM22P47051 409 aa4.72□□□□□ -1.65
SEC39YLR440C CWC23P52868 283 aaPredicted RBP4.72□□□□□ -1.65
SEC39YLR440C YGR035CP53222 116 aa4.72□□□□□ -1.65
SEC39YLR440C HCH1P53834 153 aa4.72□□□□□ -1.65
SEC39YLR440C BOR1P53838 576 aa4.72□□□□□ -1.65
SEC39YLR440C OCA2P53949 197 aa4.72□□□□□ -1.65
SEC39YLR440C LGE1Q02796 332 aaKnown RBP4.72□□□□□ -1.65
SEC39YLR440C PEX10Q05568 337 aa4.72□□□□□ -1.65
SEC39YLR440C PRP11Q07350 266 aaPredicted RBP4.72□□□□□ -1.65
SEC39YLR440C TPO1Q07824 586 aa4.72□□□□□ -1.65
SEC39YLR440C MSN1P22148 382 aa4.71□□□□□ -1.66
SEC39YLR440C YCK1P23291 538 aa4.71□□□□□ -1.66
SEC39YLR440C CTS1P29029 562 aa4.71□□□□□ -1.66
SEC39YLR440C AEP1P32493 518 aa4.71□□□□□ -1.66
SEC39YLR440C TRM2P33753 639 aa4.71□□□□□ -1.66
SEC39YLR440C YPT53P36019 220 aa4.71□□□□□ -1.66
SEC39YLR440C RPF1P38805 295 aaKnown RBP4.71□□□□□ -1.66
SEC39YLR440C EXO1P39875 702 aa4.71□□□□□ -1.66
SEC39YLR440C LSM4P40070 187 aaKnown RBP4.71□□□□□ -1.66
SEC39YLR440C YGR210CP42942 411 aa4.71□□□□□ -1.66
SEC39YLR440C GNA1P43577 159 aaPredicted RBP4.71□□□□□ -1.66
SEC39YLR440C YJL043WP47053 257 aa4.71□□□□□ -1.66
SEC39YLR440C YGR026WP53217 278 aa4.71□□□□□ -1.66
SEC39YLR440C ACT1P60010 375 aaKnown RBP4.71□□□□□ -1.66
SEC39YLR440C TPS1Q00764 495 aaKnown RBP4.71□□□□□ -1.66
SEC39YLR440C NUP49Q02199 472 aa4.71□□□□□ -1.66
SEC39YLR440C ATG39Q06159 398 aa4.71□□□□□ -1.66
SEC39YLR440C YLR179CQ06252 201 aaKnown RBP4.71□□□□□ -1.66
SEC39YLR440C PKH2Q12236 1081 aaKnown RBP4.71□□□□□ -1.66
SEC39YLR440C YLR046CQ12253 270 aa4.71□□□□□ -1.66
SEC39YLR440C CDC21P06785 304 aa4.7□□□□□ -1.66
SEC39YLR440C RPS21AP0C0V8 87 aaKnown RBP4.7□□□□□ -1.66
SEC39YLR440C RPS4AP0CX35 261 aaKnown RBP4.7□□□□□ -1.66
SEC39YLR440C RPS4BP0CX36 261 aaKnown RBP4.7□□□□□ -1.66
SEC39YLR440C ATP10P18496 279 aa4.7□□□□□ -1.66
SEC39YLR440C SAG1P20840 650 aa4.7□□□□□ -1.66
SEC39YLR440C RPB10P22139 70 aa4.7□□□□□ -1.66
SEC39YLR440C CDC50P25656 391 aa4.7□□□□□ -1.66
SEC39YLR440C SKG6P32900 734 aaPredicted RBP4.7□□□□□ -1.66
SEC39YLR440C YBL029WP38201 376 aa4.7□□□□□ -1.66
SEC39YLR440C IML3P38265 245 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms